Caballeronia sp. SBC2: SBC2_79380
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Entry
SBC2_79380 CDS
T06459
Symbol
garD_5
Name
(GenBank) Galactarate dehydratase (L-threo-forming)
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00053
Ascorbate and aldarate metabolism
caba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
SBC2_79380 (garD_5)
Enzymes [BR:
caba01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
SBC2_79380 (garD_5)
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GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Abhydrolase_6
Motif
Other DBs
NCBI-ProteinID:
QIE29862
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All DBs
Position
pSBC2-4:complement(40078..41667)
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AA seq
529 aa
AA seq
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MENSPLYIRVHPNDNVAIVVNDGGLGEGAVFPDGLVLRERVPQGHKVALVDLAEGDEVIR
YNVVIGYALKSLPSGSWINEHVIRMPSPPGLEDLPIATIRAPDMPPLEGFTFEGYRNADG
SVGSRNILAITTTVQCVADVVQHAVTRIKAELLPHYPNVDDVVGLGHTYGCGVAIDAPDA
MVPIRTVRNISLNPNFGGEVMMVSLGCEKLQPERLMPPGTIPIAAAANVAEVADIGDVEA
DQNGDVVVLQDEAHVGFQSMIDSIMRMADAHLKRLNNRRRETCPAADLVVGVQCGGSDAF
SGLTANPAVGFATDLLVRAGATVMFSEVTEVRDGVDQLTARAANADVAAAIIREMQWYDD
YLKRGGADRSANTTPGNKKGGLSNIVEKAMGSIIKSGNSAISGVLSPGEKVRQKGLIYAA
TPASDFICGTLQVAAGINLHVFTTGRGTPYSLAEVPVIKVATRSDLARRWHDLMDINAGT
IATGDATIEDVGWELFRLMLEVASGRKETCAEKLKLHNALTLFNPAPVT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattccccgctctacattcgcgttcaccccaatgacaacgtcgcgatcgtcgtc
aacgacggcggtctgggtgagggcgcagtatttcccgatgggcttgtgctgcgcgagcgc
gtgccgcaaggacacaaggtggcgctcgttgatcttgcggaaggcgacgaagtcattcgc
tacaacgtggtgattggctacgcgctcaagtccttgccgtcgggcagttggatcaacgaa
cacgtgatccgcatgccgagtccgccaggacttgaggacttgccgatcgcgaccatcagg
gcgccagacatgccgccccttgagggcttcacgttcgagggctatcgcaatgctgacgga
tcggtcggctcgcgcaacatccttgctattacgaccacggtgcaatgcgtggccgacgtg
gttcagcatgcggtcacgcgcatcaaggcagagttgttgccgcattacccgaacgtcgac
gatgtggtgggtctcgggcacacctacggttgcggcgtcgccatcgatgcgcccgacgcc
atggtgccgatccgcacggtacgcaacatcagtctgaatccgaatttcggcggcgaagtg
atgatggtcagccttggctgtgagaagttgcagccggagcgcttgatgccgccgggcacg
atccccattgccgcggccgccaatgtcgctgaagtcgccgatattggtgacgtcgaggcg
gaccagaatggcgatgtcgtcgtgcttcaggatgaagcacacgttggcttccagtcgatg
atcgattcgatcatgagaatggcagatgctcatctgaagcggctgaacaatcgccgtcgc
gagacatgtccggccgccgacctcgtggtcggcgtgcaatgcggcggcagcgacgcattc
tccgggctgactgcgaatcccgcggtgggcttcgcgaccgacttgctggtgcgcgccggt
gcgacggtgatgttctccgaagtcaccgaagtgcgggatggcgtcgatcaactgaccgca
cgcgcggctaatgcggatgtcgccgcagcgatcatccgggagatgcagtggtatgacgat
tatctgaagcgcggcggcgccgaccgcagcgccaacacgacgccgggcaacaagaaaggc
ggcttgtcgaacatcgtcgaaaaagcgatgggttcgattatcaagtcgggtaactcggcc
atctcgggcgtgctgtcgcctggcgaaaaggtgcggcagaagggcctgatttacgcggca
acgcccgcgagcgatttcatttgcggcacgctgcaggttgccgcgggcattaaccttcat
gtgttcacgaccggccgcggcacgccctatagcctcgcggaagtccctgtcatcaaggtc
gcaacacgctcggatctggcccgccgctggcatgacctgatggatatcaatgccggcacc
atcgcaactggggatgcgaccatcgaagacgtgggttgggagttgttccgcctgatgctc
gaggtggccagcgggcgcaaagagacctgcgcggagaaactcaagctgcacaatgcattg
acgctgttcaatccggcgccggtgacctga
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