Caballeronia sp. SBC2: SBC2_84040
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Entry
SBC2_84040 CDS
T06459
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00270
Cysteine and methionine metabolism
caba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SBC2_84040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caba03000
]
SBC2_84040
03032 DNA replication proteins [BR:
caba03032
]
SBC2_84040
03036 Chromosome and associated proteins [BR:
caba03036
]
SBC2_84040
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
caba02048
]
SBC2_84040
Enzymes [BR:
caba01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SBC2_84040
Transcription factors [BR:
caba03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SBC2_84040
DNA replication proteins [BR:
caba03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SBC2_84040
Chromosome and associated proteins [BR:
caba03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SBC2_84040
Prokaryotic defense system [BR:
caba02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SBC2_84040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
QIE30327
LinkDB
All DBs
Position
pSBC2-5:complement(162408..163808)
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AA seq
466 aa
AA seq
DB search
MSTKKYTLAEFFCGCGGTSRGFTRSGRFNVAFGNDVKNEALKTFEFNHRHDDVPPATIRE
DIRLLDVGSIHNALKERGVAKGDLDCMIGGPPCQGFSQLRRNEHREEGKIVKFTGYSQLA
HDPRNDLVLRYLEVAEALRPKFLVIENVPQMLNHGFDGRLGRLSEIVIQMLEKDLGYKVE
VAVVNCADYGVPQLRERAIFIASSVGPASLPKRTHADPKDKTLLDSGRKPWVTVSEAISD
LPPPLVEDSLGGGPLSHYAGDPSAYAQLMRSSEAFPFNHVTRSYKQQVLNIIKEMRPGQT
WDAESARMRTKYERAITRRANAKNISHDRARSELEQAGVVNPVFYRDYYWSAYTRLAWDA
QALTITANANFLGSGRFSHPTELRGITMREAARLQSFDDDFRFVTSMNDDQSTDKIGIGM
DMIGEAVPPNLSQAIALHLASQLDQRSAGTKVTAKEMTTQKHKEKA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaagaaatataccctggcggaattcttctgcggctgcggaggcacgtctcgc
ggcttcacccgttctggccgattcaacgtcgcgtttggcaacgacgtcaaaaatgaggcc
ctgaagacatttgagttcaatcaccgtcacgacgacgtcccaccggccactatccgcgag
gacattcgattgcttgatgtaggctcgatccacaatgcgctcaaagagcgcggcgttgca
aaaggcgacctcgactgcatgatcggaggcccgccctgccaaggcttctcccagcttcgc
cgcaatgagcaccgggaggagggcaagatcgtaaaattcaccggctatagccagcttgca
catgatccccgcaacgatttggtcctacgctacctcgaggtcgccgaagctttgcgcccc
aagttcctagtaatcgagaacgttccccagatgctcaaccacggcttcgacggccgccta
gggaggctatcggaaatcgtaattcagatgctagagaaggatctgggctataaggtcgaa
gtcgctgtggtgaactgtgccgactacggcgtgccgcaattgcgcgagcgtgcgattttc
atcgctagctcagtcggaccagcgtcgctgccgaagagaacccacgctgaccccaaagac
aaaaccctgctggattcagggcgcaaaccttgggttactgtcagtgaagccatcagtgac
ctcccgcctccgctggtcgaagacagtctgggcgggggacctctgagccattacgcgggt
gatccgagcgcgtacgcccaattgatgcgaagctccgaggctttcccctttaatcacgtc
accagaagctacaagcagcaggtcttgaacatcatcaaggagatgcgcccaggccaaact
tgggacgccgagagcgctcgtatgcgtaccaagtacgagcgggcaattacccggcgcgcc
aacgcaaaaaacatctcgcacgatagagcaaggagcgaactggaacaagcgggggttgtt
aaccccgtcttctatcgagattactactggagcgcctacactaggcttgcttgggatgcc
caagcgttgaccataaccgctaacgctaacttcctaggctcggggcgtttctcccacccc
accgagctgcgagggatcaccatgcgcgaggcagcccgcttgcaatcgtttgacgatgac
ttccgtttcgtcacgtcgatgaatgacgaccagagtacagacaagatcgggatcggcatg
gacatgattggggaggcagtgccccctaacctatctcaagccatcgccctgcatttggct
tcccagctcgaccagcgcagcgccggaacgaaggtcacggcaaaagagatgacgacacaa
aagcataaggagaaagcgtga
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