KEGG   Chelonoidis abingdonii (Abingdon island giant tortoise): 116816063
Entry
116816063         CDS       T07367                                 
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
cabi  Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03022  Basal transcription factors
cabi03420  Nucleotide excision repair
cabi04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:cabi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    116816063 (CDK7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116816063 (CDK7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    116816063 (CDK7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:cabi01001]
    116816063 (CDK7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cabi03021]
    116816063 (CDK7)
   03019 Messenger RNA biogenesis [BR:cabi03019]
    116816063 (CDK7)
   03400 DNA repair and recombination proteins [BR:cabi03400]
    116816063 (CDK7)
Enzymes [BR:cabi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     116816063 (CDK7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     116816063 (CDK7)
Protein kinases [BR:cabi01001]
 Serine/threonine kinases: CMGC group
  CDK family
   116816063 (CDK7)
Transcription machinery [BR:cabi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     116816063 (CDK7)
Messenger RNA biogenesis [BR:cabi03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     116816063 (CDK7)
DNA repair and recombination proteins [BR:cabi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     116816063 (CDK7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Kinase-like ABC1 Seadorna_VP7 Haspin_kinase APH FTA2 Pkinase_fungal
Other DBs
NCBI-GeneID: 116816063
NCBI-ProteinID: XP_032620891
Ensembl: ENSCABG00000020808
LinkDB
Position
Unknown
AA seq 343 aa
MDARARAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE
IKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDSSLVLTQSHIKAYMLMTL
QGLEYLHRHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRAPE
LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTKIFETLGTPTEEQWPGMSS
LPDYVTFKSFPGMPLQHIFSAAGDDLLDLLQGLFTFNPCTRVTATQALKQKYFSNRPGPT
PGSQLPRPNYPAEALKEQQNPLLNLKRKRTEGIDQGLPKKLIF
NT seq 1032 nt   +upstreamnt  +downstreamnt
atggacgcgcgggcgcgagctaagcgctacgagaagctcgatttcctcggcgaggggcag
tttgccactgtttataaagcaagggataagaacaccaatcaaattgttgctattaaaaag
attaaacttggacatagatcggaagctaaagatggaatcaacagaacagccctgcgggag
ataaaattgttacaggagctaagccatccaaatatcattggtcttcttgatgcatttgga
cacaaatccaatattagtctggtctttgattttatggaaacggatctagaggttataatc
aaggatagtagtcttgtgctgacacaatctcacatcaaagcatatatgttgatgacactt
caaggactggaatatttacatcggcactggattctgcacagggatctcaaaccaaacaat
ctgttactagatgaaaatggggttctaaaattggctgactttggcttggcaaaatctttt
ggaagtccaaatagagtctatacacaccaggtagtaacaagatggtatcgagcacctgag
ctactgtttggtgctagaatgtatggtgtaggtgtagatatgtgggctgttggctgtatc
ttagcagaactgcttcttagggttccttttttgccaggagactctgatcttgatcagctg
acaaaaatatttgaaacgctggggactccaacagaagaacagtggcctggcatgtctagt
cttccagattatgtaacatttaagagtttccctggaatgccacttcaacatatcttcagt
gcagctggtgatgacttgctagatcttctccaaggtcttttcacatttaatccttgtact
agggtcacagctacacaggcattgaaacagaagtattttagtaatcgaccaggaccaaca
ccaggaagtcaattgccaaggccaaactatcctgcagaagccttaaaagaacaacaaaat
ccacttttaaatttaaaaagaaagagaacagaaggaatagatcaaggattaccaaaaaag
ttgattttttga

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