Chelonoidis abingdonii (Abingdon island giant tortoise): 116817424
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Entry
116817424 CDS
T07367
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116817424 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_3
DL-JAG_EGF-like
cEGF
Motif
Other DBs
NCBI-GeneID:
116817424
NCBI-ProteinID:
XP_032623411
Ensembl:
ENSCABG00000004418
LinkDB
All DBs
Position
Unknown
AA seq
2538 aa
AA seq
DB search
MQQLLVQSLLLSLLPVLSRGLRCTQPAESCLNGGKCETYSNGTGVCLCNSAHVGDRCQLP
NPCLSTPCKNAGTCHPVIRGNAVDYTCSCRVGFTDRLCLTPVENACLNNPCRNGGTCDLL
TLTEYKCRCPPGWSGKTCLQADPCASNPCANGGHCVPFDAHYVCKCTAGFHGANCKQDVN
ECNTSPPICKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQTGDTT
YDCTCLPGFAGQNCEDNIDDCPGNNCKNGGTCVDGVNTYNCQCLPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFQGATCHDRVASFYCE
CPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACNQDIDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGIYCEINTDECASSPCLHNGNCIDKINEFHCECPTGFNGHLCQYDIDECASTPCKNG
AKCIDGPNTYTCECTEGFAGAHCEIDKNECDPDPCHYGTCRDGVAAFTCLCQPGYTGHLC
EFNINECQSQPCKNGGTCQDRDNAYNCLCLKGTTGTNCEINLDDCASNPCDYGKCLDKIN
GYECTCKPGYTGRMCNINIDECAGNPCHNGGTCKDGINGFTCICPEGYHDPMCVLEVNEC
NSNPCIHGKCNDGLNGYRCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGATCEDVLAPCAAGPCKN
GGECRESEDYESFSCACPSGWQGQTCEIDINECVKSPCRNGATCQNTDGSYHCNCKAGYS
GHNCDTDIDDCKPNPCHNGGSCSDSIDAFFCACLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCVCPPGFTGSYCEH
DINECDSKPCLNGGTCQDSYGTYKCACPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNL
YRCECNSGWTGLYCDVPSVSCDVAAKQQGVDMVHLCRNSGLCVDTGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINIDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRQGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGWGFICKCPPGFDGATCENDLRTCGNLRCLNGGTCISGHKSSKCMCDPAFTG
PDCQYPISSPCHSNQCYNGGTCEYFSDAPPYYRCKCPANFNGLYCHILDFDFRGGIGQDI
PPPTIEEKCEIPDCAGFAGNKICDAKCNNHSCGWDGGDCSLNFNDPWKNCSQSLECWKYF
NNEQCDKQCNNTGCLYDGFDCLKVEGQCNPLYDQYCKDHFSDGHCDQGCNNAECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRILHTNVVFKKNPKGEYMIFPYY
GNEEELKKHHIKRSTENWSDMPSTVFNTIKTSLSSRVGERQRRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSTTDVAAFLGALASLGSLNIPYKIEAVKSETAEPQRNSQLYPMYVVV
AALVLLAFIGVGVVVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDMDDQTDHRQWTQQHLDAADLRISSMAP
TPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINCHADVNGVDDLGKSALHWAAAVNN
VEAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI
AQERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPNSYIGNMKPNVQGKKARKP
STKSLSCNSKDSKDIKARRKKSQDGKGCLLDSSSVLSPVDSLESPHGYLSDVASPPLMTS
PFQQSPSMPLNHLPGMPDAHMNINHLNMAGKQDMAMGSSSRMAFDSVPPRLSHLPVSSPS
TVMSSAPMNFTVGGAASLNGQCDWLTRLQNGMVQNQYNPMRSNIQAGAHQQTQALQHGMM
TSLHNGMPTTTLSQMMSYQPMPNTRLASQPHLMQAPQLQQIQQQQNLQQQLQQQNLQQQQ
HHNTSSNTNTHISQNFLSNELNQSDMQQVSSTTMTVHTILPQETQILSTSLPSSLTQPMT
TTQFLTPPSQHSYSSPLDNTPNHQLQVPDHPFLTPSPESPDQWSSSSPHSNISDWSEGIS
SPPTSMQSQIVHIPEAFK
NT seq
7617 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcttctggtgcagagcctcttgctgtcactgctgcccgtgctgagccgaggt
ttacgatgtacccagcctgccgaatcctgcttgaatgggggaaagtgtgaaacttactcc
aatgggactggggtatgcctatgcaacagcgcccacgtaggcgaccggtgccagctgcca
aatccctgcctcagcaccccatgcaagaatgctggcacctgccacccggtcatccgtggc
aatgctgtggactacacctgttcctgccgcgtgggcttcacagacaggctgtgcctgact
cccgtggagaacgcctgcctcaacaacccctgccgcaatggagggacctgcgacctactc
acgctgactgagtacaagtgccggtgccctccaggatggtcaggaaagacctgcctgcag
gcagacccctgtgcctccaacccctgtgcaaacggagggcactgcgttcctttcgacgcc
cattacgtctgcaagtgcactgcgggcttccacggggctaactgcaagcaggacgtgaac
gagtgcaacaccagtcctcccatctgcaagaacggcgggagctgcaccaacgaggtcggg
acttaccagtgttcctgcaagccagcatacacgggccagaactgcgagcacctctatgtg
ccttgcaacccctcgccctgccagaacgggggcacttgccgtcagactggcgacaccacc
tatgactgcacgtgtcttccaggttttgctggtcagaactgtgaggacaacattgatgac
tgtcctggaaacaactgcaagaatggaggcacctgtgtggatggagttaacacctacaac
tgccagtgccttcctgagtggacaggccagtattgcactgaagatgttgatgagtgccag
ctcatgccgaatgcctgccagaatggaggaacgtgccacaacaaccatggtggctacaac
tgcgtatgtgtcaacggctggaccggcgaggactgcagtgagaacattgatgactgtgct
atggctgcctgcttccagggtgctacctgccatgaccgggtggcctctttctactgcgag
tgcccacatggccgcacaggtttgctgtgccacctgaatgacgcctgcatcagtaacccc
tgcaacgaaggctctaactgcgacaccaaccctgtcaacggcaaagccatctgcacctgc
ccctcgggttacacgggcccagcctgtaaccaagacatagatgagtgctctctaggagcc
aatccttgtgagcatgctgggaaatgcatcaacacccaagggtccttccagtgccagtgt
ctccaggggtattcgggtccccgctgtgagatagacgtcaatgaatgcctctcgaatccg
tgccagaatgatgccacctgcctggatcagattggtgaattccagtgtatctgcatgcca
ggttacgagggcatttactgtgaaatcaacacggacgagtgtgccagcagcccctgcctg
cacaacgggaactgcatcgataagataaacgagttccactgcgagtgccccacaggcttt
aacgggcacctgtgtcaatacgacatcgacgagtgcgccagcacgccgtgcaagaacggg
gctaagtgcatagacggccccaacacctacacctgcgagtgcacagaaggatttgctggt
gctcactgcgaaatcgacaaaaacgaatgtgaccctgacccgtgccactacgggacctgc
agagacggcgtcgctgccttcacctgtctctgccagcctggctacacgggccacctctgt
gaattcaacatcaacgagtgccagagccagccgtgcaaaaatggagggacctgccaggac
agggacaacgcctacaactgcctgtgcctcaaaggaaccacagggactaattgtgaaatc
aacctggacgactgtgctagcaacccatgtgactatggcaagtgcctagacaagatcaat
ggctatgaatgtacctgcaagccaggatacacagggagaatgtgcaacatcaacatcgac
gagtgtgccggcaacccatgccacaacggcggaacctgtaaggacggcatcaacggcttc
acgtgcatctgccccgagggataccacgaccccatgtgcgtgctggaagtgaatgagtgt
aacagcaatccctgcatccatgggaaatgcaatgatggactcaatggctacaggtgtgat
tgtgacccaggctggagcgggacaaactgcgacatcaacaacaacgagtgtgaatcgaat
ccttgcatgaacgggggcacctgcaaggatatgaccagtggatacatctgtacctgccgg
gagggattcagcgggcccaactgccagaccaatatcaatgaatgtgcttccaacccttgc
ctgaatcagggaacctgcatagatgatgtagccggctacaaatgcaactgtctcctgcca
tatacaggggctacgtgcgaggacgtgctagctccgtgtgcagctggtccgtgtaagaat
ggtggcgagtgcagagagtcagaggactatgagagcttctcctgcgcgtgcccctccggc
tggcaaggtcaaacctgtgagattgacatcaacgaatgtgtgaaaagcccctgtcgaaat
ggcgccacgtgccagaacacagatgggagctaccactgcaactgcaaagctggctacagc
ggccataactgcgacactgacatcgacgactgcaagccaaatccctgccataacggcggt
tcctgctctgacagcatcgatgccttcttctgcgcctgcctggcaggcttccgggggccc
aaatgcgaggaggacatcaacgagtgcgccagcaacccctgcaagaatggggccaactgc
acggattgtgtcaacagctacacgtgcacctgcccctctggcttcagcgggatccactgt
gagaacaacacacctgactgcacagaaagctcctgttttaacgggggaacctgtgtggac
ggcatcaacaccttcacctgcgtgtgcccacctggcttcacgggcagctactgcgagcat
gacatcaacgaatgcgactccaagccatgcttgaatgggggtacctgccaggacagctac
gggacctacaagtgcgcctgtccgcagggctacaccggcctcaactgtcagaatctggtg
cgctggtgcgactcctctccctgcaaaaatggaggcaagtgctggcagaccaacaacctg
taccgctgcgaatgcaacagcggatggacgggcctgtattgtgatgtccccagcgtatcc
tgtgacgtggctgcaaagcagcaaggcgtcgacatggtgcacctgtgcaggaactccggc
ctttgcgtggatacaggcaacacgcacttctgccgctgccaggctggctacaccggcagt
tactgcgaggagcaggtggacgagtgctccccgaacccttgccagaatggagctacgtgc
acggactacctgggaggctactcctgtgagtgtgttgctggctatcacggagttaactgc
tctgaggagatcaatgagtgcctgtctcacccatgccagaatggaggaacctgcatcgat
ctcatcaatacctacaaatgctcttgccccagagggactcaaggggtgcactgtgaaatc
aacatagacgactgcagccccttctttgatcccgtcactctggggcccaagtgctttaac
aacggcaaatgcacagaccgggtgggtggctacagctgcatctgcccacccggcttcgtg
ggggagcgctgtgagggggacgtcaacgagtgcctgtccaacccgtgtgacgcacggggg
acccagaactgtgtgcagcgcgtcaacgattacaagtgcgagtgcaggcaagggtatgca
ggccgtcgctgtgacaccgtggtggatggctgtaagggcaaaccctgcaggaacggcgga
acgtgtgcagttgctagcaacactggctggggcttcatctgtaaatgcccccctggtttt
gatggcgccacttgtgaaaacgacttgcgcacctgtgggaacctgcgctgcctgaacggc
ggcacctgcatctctggccacaaaagctccaagtgcatgtgtgatcctgccttcacgggg
ccagactgccagtaccccatcagcagcccttgccattcaaaccagtgttacaacgggggt
acctgtgaatacttcagtgacgctcccccatattaccggtgcaaatgccctgcaaatttc
aatggcctatactgccacatcctggatttcgatttccggggaggcattggccaggacatc
cccccacccacaattgaggagaaatgtgagatacccgattgcgcgggtttcgctggcaac
aagatctgcgatgcgaagtgcaacaaccattcctgtggctgggacggaggggactgttcc
ctcaacttcaacgacccctggaagaactgctcgcagtcgctggagtgctggaagtatttc
aacaacgaacagtgcgacaagcagtgcaacaacactgggtgtctgtacgacggctttgac
tgcctgaaggtggaagggcaatgcaatcctctgtatgaccaatactgtaaagatcacttt
tcagatggtcactgtgaccaggggtgtaacaacgctgagtgtgaatgggatggtctggac
tgtgccaacaacatgcctgagaaacttgcagatggcactttggtagtggtggtcctgata
actccagagaacctgaagaacaactccttcaacttcctccgggagctcagccgcatcctt
cacaccaatgtggtcttcaagaagaaccccaagggagagtacatgatcttcccatactac
ggcaatgaagaggagctgaaaaagcaccacattaagaggtcgacggagaactggtcggac
atgcccagcactgtcttcaacacaataaagacgtccctctcgtcgcgtgttggtgaaagg
cagcggagagagctggatcagatggatatcagaggatccatcgtatacttggaaatcgac
aaccgccagtgcatccagtcctcctcgcaatgctttcagagcacaactgacgtggcggct
ttcctgggtgccttggcctcacttggtagcctgaacatcccctacaaaatagaagctgtt
aaaagtgaaacagctgagccccagaggaactcccagctgtatcctatgtatgtggtggtg
gctgcacttgtcttgcttgctttcattggagtgggagtagtggtatctcgaaagcggcgt
agggagcatgggcagctctggttccccgaaggcttcaaggtgacagaatcaagcaagaag
aagcgacgagaaccacttggggaggattctgttggcctgaaacccctgaaaaatgcttct
gatggcaccttgatggatgacaaccagaatgaatggggtgatgaagaaaccttggacact
aagaagttcaggtttgaggagcaggcgatgctgccagacatggacgatcagacagatcac
aggcagtggactcaacagcacctagatgcagccgacctgcgcatctcttccatggcaccc
accccaccgcaaggtgaaattgatgcagattgtatggatgtcaacgttcgaggtcctgac
ggattcaccccactcatgatcgcttcgtgcagtggaggagggctggagactggcaacagc
gaagaggaggaggatgctcccgctgtcatctcagatttcatttaccagggtgccagcttg
cacaaccagacagaccgaaccggcgagacggcacttcacctggccgcaaggtactctcgc
tccgatgctgccaaacgcctgctggaggccagtgcagatgcaaacatccaggacaacatg
ggcaggacgcccctccatgcagctgtctcagctgatgctcaaggagtcttccagatcctg
attaggaacagagcgaccgatttggatgcccgcatgcacgatgggaccacaccgctgatc
ttggcagctcgcttggcagtggagggcatgctggaggatctgatcaattgccacgcagac
gtcaatggagtggatgatctaggcaaatcagcactgcactgggcagctgctgtgaataac
gtagaagctgcggtggtgctgctgaagaacggtgccaataaagacatgcagaacaataag
gaggagacaccgttgtttcttgcagccagagaagggagctacgaaactgccaaagtcctc
ctggatcactttgcgaaccgtgacataacagatcacatggaccggctcccacgggacatt
gcgcaggaacgcatgcaccatgacattgtgcggctgctggacgagtataacctggtacgg
agccctccactgcataatggcccgctgggggcgcccaccctatctcccccgctctgctct
cccaacagttacatcggcaacatgaaacccaatgtccaggggaagaaagctaggaaacca
agtaccaagagcctgagctgcaatagcaaagattccaaagacatcaaagccaggaggaaa
aaatcgcaggatgggaaaggttgccttctagatagctcaagtgtgctgtcaccagtcgac
tccctggagtcgccccatgggtacctgtcagatgttgcttctcctccactgatgacatct
ccatttcagcagtccccatccatgcctctgaatcacctgccaggcatgcctgatgcccac
atgaatatcaaccatcttaacatggcgggaaagcaggatatggcaatgggcagctccagc
aggatggccttcgattcagtgcccccgcgtctctctcaccttcctgtatccagccccagc
acagtcatgagcagtgcaccgatgaatttcactgtaggcggagctgccagcctgaacggg
cagtgcgactggctaacaaggctgcaaaatgggatggtccagaaccagtataatccaatg
agaagcaacatccaggccggtgctcaccagcaaacccaagcccttcaacatggcatgatg
acttccctgcacaatggcatgcccaccactaccctgtcacagatgatgagctaccagccc
atgcctaatacaaggctggcctcccagccacatctgatgcaggccccgcaattgcaacag
atccaacagcagcagaatttacagcagcagctgcaacagcaaaatctgcaacagcagcaa
catcacaataccagctcaaataccaacacccacattagccaaaacttcctcagtaacgag
ctaaaccagtcagacatgcagcaggtgagcagcactaccatgacagtgcacactattttg
cctcaagagacccagatcctatcaacgtctctaccatcctccctcacacaacccatgacc
accacccagtttttaactccaccctcccaacacagttactcctcccccttggacaataca
cccaatcaccagcttcaggtgccagaccaccctttcttaacaccttccccggagtcaccg
gaccaatggtcaagctcgtcacctcattccaacatatctgattggtcagaggggatctcc
agccctcccacaagtatgcagtcacagatagtacacatcccagaagccttcaagtaa
DBGET
integrated database retrieval system
