Chelonoidis abingdonii (Abingdon island giant tortoise): 116819100
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Entry
116819100 CDS
T07367
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116819100 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116819100 (POLR1B)
Enzymes [BR:
cabi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116819100 (POLR1B)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
116819100 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
116819100
NCBI-ProteinID:
XP_032626434
Ensembl:
ENSCABG00000021006
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MYTYRVSFGFQAIPALEFAFKNERITLAVVGAVINPPMVPKGSICKELKVYPAECRGRRS
TYRGKLTADISWSVNGIPKGIIKQSLGYVPIMVKSKLCNLHSLSPRALIEHHEEEEEMGG
YFIVNGIEKVIRMLIMPRRNFPIAMIRPKWKSRGPGYTEYGISMHCVRDEHTAINMNLHY
LENGTVMLNFIFQKELFFLPLGFALKALVGFSDYQIFQELIKGREDNSFYKNCISQMLRM
VMEEGCATQKQVLNYIGKCFRVKLSLPEWYPNEQAAEFLLDQCICVHLKTKTEKFYLLCL
MTRKLFAFAKEECMEENPDSLMNQEVLTPGQLYLMFLKERMEAWLLSVKVALDKRSQKTN
ITINSENMMKLFSMGIDVTRPFEYLLATGNLRSKTGLGMLQDSGLCVVADKLNFIRYLSH
FRCVHRGAAFAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHITTVCEIVTQSSYTL
SLPPLLCSLGVTPVDGTPSQPYAECYPVTLDGSLVGWVEKDMAPTIADTLRHFKVMQEKK
IPAWTEVVLIPMTGKPSLYPGLFIFTTPCRMVRPVRNLALGKEELIGTLEQVFMNIAVLE
DEIVPGVTTHQELFPHSMLSVVANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSD
NKLYRLQTPQSPLVRPAMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVSKASWERGF
AHGSVYKTESIDLAEKIKQGDDSLVFGVKPGDPRVIQNLDADGLPHVGSILQYGDPYYSY
LNLSTGESFITYYKSKESCIVDNIKVCSNDSGNGKFKSVCITMRIPRNPTIGDKFASRHG
QKGILSRLWPVEDMPFTESGMVPDLLFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDAT
PFTFSEENSALEYFGKMLKAAGYNYYGTERMYSGISGVELEADIFIGVVYYQRLRHMVSD
KFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAH
VCVKCGSLLSPLLEKPPPSWSTTRNRKYYCTVCNQSDTIDTVSVPYVFRYFVAELAAMNI
KVKLDVN
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtacacatacagagtttcttttgggtttcaggctattcctgctctggaatttgctttc
aaaaatgaacgcatcactctggcagttgtgggcgctgtcatcaatcctcctatggtgcca
aaagggagtatctgtaaagagctgaaagtgtacccagcagaatgtagaggacgcagaagc
acttatcgtgggaaattgaccgctgacatcagctggtcagtgaatggcattcctaaaggg
attattaaacagtccctgggatacgttccaatcatggtgaaatcgaagctgtgcaatctg
cacagtctttctcccagagctctgattgaacaccatgaggaagaagaggaaatgggaggc
tattttatagttaacggtatagaaaaagttatcagaatgctgattatgcctagacgaaac
tttcccattgcaatgataagacccaaatggaaaagccgaggccctggttacacagagtat
ggtatatcgatgcactgtgttagggatgagcacactgctataaacatgaaccttcactac
ctggaaaatggtacggtgatgctgaatttcatttttcagaaagagttgttcttcctgcca
ctgggatttgcactgaaggcattagttggtttctcagattaccagatttttcaggaattg
atcaaaggaagagaagacaactccttctataagaactgcatctctcagatgctgagaatg
gtaatggaggaaggctgtgccacacaaaagcaggtccttaactacattgggaaatgcttc
cgagtgaaactcagccttcctgagtggtacccaaatgagcaagctgcagaattccttctg
gatcagtgcatctgtgtacacttgaaaaccaaaaccgagaagttctacttgctttgtctg
atgacccggaagctgtttgcttttgccaaagaagagtgcatggaggagaatccagacagc
cttatgaatcaggaggtgcttacccctgggcagctttacctcatgttcttaaaggagagg
atggaagcttggttgctttctgttaaagtagccttggacaaaagatctcagaagaccaat
ataaccatcaattcagaaaatatgatgaagctattcagcatgggaattgatgttacaagg
ccatttgaatatctccttgctactggtaacctgcgctctaaaacaggtctgggtatgcta
caagattctgggctgtgtgtggtggcagacaagctgaattttattcgttacctgtcccat
tttcgctgcgtacacagaggtgccgcgtttgccaagatgagaaccaccacagtgcgcaaa
ctgctcccagaatcctggggcttcctgtgccctgtgcacacccctgacggagagccctgt
gggctgatgaaccatattacgactgtctgtgaaatagtgacgcagtcatcctacaccttg
tccctgccacctttgctctgctccttaggtgtcactcccgttgatggaactccaagccaa
ccctatgcagagtgttacccagtcacactggatggctcgttagtgggctgggtagaaaaa
gatatggctcctacgattgcagatactctccggcactttaaggtaatgcaagaaaagaaa
attccagcctggactgaagtggtccttattccaatgacaggaaaacccagtctgtatcca
ggattattcatttttactaccccttgcaggatggttcggcctgtgagaaatttggccttg
ggaaaggaagaattgattggtactctggaacaggtcttcatgaacattgctgtccttgag
gatgaaattgtacctggcgtgaccactcaccaggagctctttcctcatagcatgctgagt
gtggtagccaacttcattccattctctgatcacaaccagagtcccagaaacatgtaccaa
tgccagatgggtaagcaaactatgggctttccacttctgacttaccaggatcgctcagat
aataaactgtaccgacttcagactccgcagagccccttggtgcgcccggccatgtatgat
tactatgacatggacaactatccaatcggtaccaatgcaattgttgctgtcatctcctac
acgggctatgacatggaagatgcaatgattgtgagtaaggcttcatgggagagaggattt
gcacacggcagcgtttacaagacagagagcatagatcttgctgaaaaaatcaaacaagga
gatgacagtctggtgtttggagtcaagcctggtgatccaagggttattcagaatctggac
gctgacggactgccgcacgttggatccatactgcaatatggagacccttattacagctac
ctgaacctcagtactggggagagcttcataacctattacaagagtaaggaaagttgcatt
gtggataacatcaaagtgtgcagcaatgacagtggaaatggaaaatttaaaagcgtttgc
atcactatgagaatccctcgtaatccaaccattggggacaaatttgccagccgacatgga
cagaagggtattttaagcagactctggccagttgaggacatgccatttacagagagtgga
atggttccagatcttctcttcaatcctcatggctttccatcccgaatgaccattggaatg
ctgattgagagcatggcagggaagtctgcagcattgcatggcctctgtcacgatgccact
cccttcacgttttcggaggagaactctgccttggaatactttggcaagatgttgaaggct
gctggctataactactacggaacagagcggatgtacagtggaatcagtggggtggaactg
gaggcagacattttcattggagttgtatactatcaacgcctgcgtcacatggtttcggac
aagttccaagtgaggacgacaggagccagagataaagtcaccaaccagcccattggtggg
aggaatgtccagggtggaattcgcttcggagagatggaacgtgatgccttgttggctcat
ggcacgtccttcttgctgcatgaccgtctcttcaactgttccgatcggtctgtggcccac
gtctgtgtcaagtgtggcagtttgctttctcctttgctggagaagcctccgccttcctgg
tccacgactcgcaataggaaatactactgtactgtgtgcaatcagagcgacacaatcgac
actgtttctgtgccttatgtcttccggtattttgtggctgagttggcagccatgaacata
aaagtgaaactcgatgtgaactaa
DBGET
integrated database retrieval system
