Chelonoidis abingdonii (Abingdon island giant tortoise): 116826612
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Entry
116826612 CDS
T07367
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116826612 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116826612 (TPR)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116826612 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
Motif
Other DBs
NCBI-GeneID:
116826612
NCBI-ProteinID:
XP_032639327
Ensembl:
ENSCABG00000002347
LinkDB
All DBs
Position
Unknown
AA seq
2364 aa
AA seq
DB search
MAAVLQQVLERAELAKLPKPVQGKLERFLADQQSEIDGLRARHERFKVDSEQQYFEVEKR
LAQSQERLVNETQECQTLRQELNKLNEQLKSLNEKNKELEAAHDRNAAIQSQLTRAKEEL
EGEKRDLVRMSERRSQEIEHLNEDVKRLNEKLTEANSAKVELQLKLDELQTSDVSVKYRE
KRLEQEKELLQNQNTWLHTELKAKTDELLLISREKGNEILELKCSLENKKEEVSRMEEQV
NSLKLSNENLQKHVEDLLTKLKEAKEQQAGMEERFHNELNAHIKLSNLYKSAADDSEAKS
NELTRAVEELHKLLQEAGEANKATEDHLAEMEESKTAMEKELREKISKLEKELENANDLL
SATKRKGAILSEEELTAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLLLEKRENKRIN
KYLDEIVQEVEAKAPILKRQREEYERSQKAVVSLSAKLEQAMKEIQRLQEDTDKANKHAS
VLERENQRLEIQVKDLSQQVRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
RNIEELQQQNQRLLVALRELGDAREKEEQETTSSRISELQSQLEEAIHELEKLREARHVQ
LQLVDSIVRQRDMYRVLLAQTTGVVIPVQASSMLPEEISFTSTPKRSTQALSTPAPVSMT
ESAEAVEAKAALKQLREVFENYRKEKAENDKLLNEQNEKLQEQVTDLRSQNAKMSTQLEF
ASKRYEMLQDNVEGYRREITSLQERTQKLTATTQKQEQIINTMTQDLRGANEKLAMAEVR
AENLKKEKDILKMAEVRLTQQRESLLAEQRGQNLLLTNLRTIQVILERSETETKQRLNNQ
VEKLEREISQLKKKLENEVEQRHVLTKNQDVHLLDTKRQLETEMNRHLNTKELLKNAQKE
IATLKQQLNNTEAQLASQTSQQAPGKGQSSADVDDLVSRLRQAEEQVNDLKERLKTTTSN
VEQYRAMVLSLEESLNKEKQVTEEVRATVEARLKDSSEYQAQLEKKLMEAEKEKQELQDE
KRKAIESMEQQLSELKKSLSNVQSEVQEALQRACTAINNEQQARRDCQEQAKIASEAQNK
YERELMLHAADVEALQAAKSQVAKNSAIRQQLEEATQKAESALLECKASWDERERMLKDE
ASKLGSRCEDLEKQNRLLHEQLENLSNKMVTSVKESMPSALNVSLNEEGKSQEQILEILR
FIRREKEIAETRFEVAQVESLRYRQRVDHLERELQELHDSLNAEREKVQITAKTIAQHEE
LMKKMETMNVLIETNKMLREEKERLEQELQQMQAKVRKLEADILPLQESNAELSEKSGML
QAEKKLLEEDVKRWKARTQHLLSQQKDTDLEEYRKLLSEKEANTKRIQQMSEETGRLKAE
IARSNASLTTSQNLVQTLRDELTKIRTEKDTLQKELENKVADIQEKVKTITQVKKIGRRY
KTQYEELKAQYDKVVAETSTQSFAEEQEQQASVQEIQELKESLSQAEVKTKALENQIENL
QKTIAEKESEARSLQEQISQLQSELSRLHQDLQERTTQEEQLRQQITEKEEKTRKTLLAA
KQKIAQLAGTKEQLTKENDEWKQKSSALEEQKTELEVRMSALKSQYEGRICRLERELREQ
QERHHEQRDEPPESTNKVPEQQRQITLKSTPASGERGIASTSDPPTANIKPTPVVSTPSK
VTATAIPGSKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPVEHVPV
FGSTSGSVRSTSPNVQTSLSQPILTVQQQTQATAFVQPTQQSHPQIEPATQEPPPTIVEV
VQSSQIERPSTSTAVFGTVSATPSSSLPKRPREEEEDNTVENTEQISEETVDIPLPKKQR
SVQRVEPEEEITAEESTDGEVETQIYNQDSQDSIGEGVTQGEYAPMEDSEETSQSLPIDL
GPLQSDQQNTSSSQDGQSKRDDVIVIDSDDEEDDEEENEGEQEDYEDEEEEDEDDDEDTG
MGDEGDDSNEGTGSADGNDGYEADDAEGADGTDPCTETEESMGGGESNQRAADSQNSGEG
STSAAESTFSHESSREQQPTSASERQASRLPQSPRRPPHPLPPRLTIHAPPQELGPPVQR
IQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAG
VPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAA
PVTVFTESTTADPSEHASQSVPMVTTSTGSLSATTESGVGDDGDEVFVEAESEGITSEAG
LEIDSQQEEESVQAPDESDLPSTSQDPPSSSSADTSSNQPKPFRRVRLQPPTLRTGVRGR
QFNRQRGVTHAMGGRGGLNRGNIS
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtgttgcagcaggtcctggagcgggccgagctggccaagcttcccaagccg
gtgcaggggaagctggagcgcttcctggccgatcagcagagcgagatcgatgggctccga
gccaggcacgagcgctttaaggtggacagcgaacaacagtattttgaagtggaaaagcgt
ctggctcaaagtcaagagagacttgtaaacgagacacaggaatgtcagactctccgtcag
gagctaaacaaacttaatgagcagttgaaatcattgaatgagaaaaacaaagaacttgaa
gcggctcatgatcgcaatgcagccatacagagtcagcttactagagcaaaagaagaattg
gaaggtgaaaagagagatttggttcgaatgagtgagagacgctctcaagaaattgaacac
ttaaatgaggatgttaaacgtctaaatgagaaacttacggaagcaaactcagcaaaagtg
gagctacaactgaaactggatgagcttcaaacatcagatgtctctgtgaagtatcgtgag
aaaaggttggagcaagaaaaggaattattacagaatcagaacacgtggctgcacaccgag
ttgaaagccaaaacagatgaactcttgcttatttccagggagaagggaaatgaaatcctt
gagcttaaatgtagtctggagaacaagaaagaagaggtttccagaatggaggagcaggta
aacagcttaaaattgtcaaatgaaaatttacagaaacacgtggaagatcttttgactaaa
ttgaaggaggcaaaagaacagcaagccggtatggaagaaagattccataatgaactaaat
gcccacataaagttatccaacttatacaagagtgctgcagatgattcagaagcgaagagc
aatgagctgacgcgagcagtagaggagctgcacaaacttttacaagaagcaggtgaagct
aacaaagcaacagaggatcatttggctgagatggaggagtctaaaactgcaatggaaaaa
gaactcagagagaagattagcaagttagagaaagaactggagaatgctaatgatttactt
tctgctacaaaacgtaaaggagccatactgtctgaggaagagctgacagccatgtctcct
actgctgcagcggtagctaaagtggtgaaacctggaatgaagttaaccgagctttacaat
gcctatgtggaaacacaggatcagctacttctggagaagcgggaaaataagagaattaac
aagtatttggatgaaatagtacaggaagtggaagccaaagcaccaattttaaaacggcaa
cgtgaagagtatgaacggtcacagaaagctgtagtcagtttgtcagctaagcttgaacaa
gctatgaaggaaattcagcgattgcaagaggatactgataaagccaataagcatgcttct
gtactggaaagagagaaccaaagactggaaatacaagtgaaagacctttcacaacaggtg
agagtgcttttaatggaacttgaggaagccagaggcaatcatgtaattcgtgatgaagaa
gtgagctctgctgacataagtagctcttctgaagtaatatcccagcatctagtctcctac
agaaatattgaggaacttcagcagcagaatcagcgtctcttggtggctcttcgggagctt
ggggacgctagagaaaaagaggaacaagaaacgacttcatctagaatttctgagctgcag
agtcaacttgaagaagccatccatgagttagagaaactgcgtgaagcacgtcatgttcag
ctgcagcttgtagactctatagttcgtcagcgtgatatgtaccgcgtactgttagctcag
acaactggagttgtcattccagtgcaagcttcaagtatgttgccagaagagatttctttt
acatcaaccccaaaacgttcaactcaggccctgtcaactcctgctccagtatcaatgact
gagtctgcagaggcagtagaggctaaggctgcccttaaacagctgcgggaagtttttgag
aactacagaaaagaaaaggcagagaatgacaaactgctaaatgaacaaaatgaaaaactt
caggagcaagtcacagacttgcggtcgcagaatgctaagatgtccacccaacttgaattt
gcctccaaacgttatgagatgctgcaggataatgttgagggatatcgtcgagaaataaca
tcccttcaggagagaacgcaaaagctcacagcaacaactcagaaacaggaacagataatt
aataccatgacccaagacttaagaggagctaatgaaaagctggctatggcagaggtaaga
gcagagaacttgaaaaaagagaaggatatcttgaagatggctgaagttcgtctgacccag
caacgagaatctttattagctgagcaaaggggacaaaatttactgcttactaatctgcga
actattcaggtgatattggagaggtccgagacagagactaaacaaagactcaacaaccag
gtagagaaactagagcgtgagatatcccagctaaagaagaaactagagaatgaggtggaa
caaaggcacgtgcttaccaaaaaccaagatgttcatctgttggatactaagagacaactt
gagactgaaatgaaccgtcaccttaacacgaaggaactgctgaagaatgcccaaaaagag
attgccacattgaaacagcagctgaataatactgaagctcaattagcttcccagacatca
cagcaggctcctgggaaaggacaatctagtgcagatgtggatgatctcgttagtcgacta
agacaagctgaggaacaagttaatgacctgaaggaaagactgaagactactactagtaat
gtggaacagtacagagctatggttcttagtctagaagaatcccttaataaagaaaaacag
gtgacagaggaagttcgggcaactgttgaggctcgtttgaaggattcttctgagtatcaa
gcacagctagaaaagaagctgatggaggcggagaaggaaaagcaagaacttcaggatgag
aaacgcaaagctatagagagcatggagcaacagctatctgaactgaagaagagtctctct
aatgtgcaatctgaagtccaggaagctcttcaaagagcatgcacagcaataaataatgaa
cagcaagccaggcgtgactgtcaggaacaagcaaaaatagcttcagaagctcaaaataag
tatgagcgagaattaatgcttcatgcagctgatgtagaggccttgcaggctgctaaaagt
caagttgctaagaattcagcaataaggcagcagttagaggaagctactcaaaaagctgaa
tctgcacttctggaatgcaaagcctcatgggacgagcgggagagaatgttaaaggatgaa
gcttcaaagcttgggtctcgctgtgaagacttagaaaaacaaaaccgattattacatgag
cagctagaaaatctaagtaacaagatggtgacctctgtgaaggaatctatgccaagtgca
ttgaatgtttcgctcaatgaagaaggcaaatcacaagaacaaatcttagaaattctcaga
tttatacgccgagagaaggagattgcagaaacaaggtttgaagtggcccaggtggagagc
ttgcgttatcgtcaaagggtggatcacctggaaagggagctccaggagttgcatgatagt
ctgaatgcagagagagaaaaggtgcagataacagcaaaaacaattgctcagcacgaagaa
ttaatgaaaaagatggaaaccatgaatgtgttaatagaaaccaacaagatgctgagagaa
gagaaagagaggctagaacaagaactacaacaaatgcaggcaaaggtgcgtaagctagag
gcagacatcctacctttgcaagagtctaatgctgagctaagtgaaaaaagtggaatgctt
caggcagaaaagaagctgttggaagaggatgtcaaacgttggaaagcccggacccagcac
ttactgagccaacagaaagacactgatcttgaagaatatcggaaactcctttcagagaag
gaggcaaataccaaacgcatacaacagatgagtgaagaaacaggcaggcttaaagccgaa
atagcaagatctaatgcatctctgactacaagccagaatctggtccagaccctcagagat
gagctaactaaaataagaactgaaaaggacactcttcagaaggagctagagaataaagtg
gctgacatacaagaaaaagtcaaaactataacacaggtcaagaaaattggacgacgatac
aagactcagtatgaagagctgaaagcgcaatatgacaaggtggttgctgagacatcaact
cagtcttttgcagaagaacaagaacagcaagcttctgtccaggaaatacaagaactaaaa
gagtctctcagccaggctgaggtgaagacaaaagctctggagaatcagattgaaaatttg
cagaagactatagcagagaaagaaagtgaagccagaagtcttcaggaacagatatctcag
ctacagtcagaactttctcgtcttcatcaagatttgcaagagagaacaacacaggaagaa
cagctcaggcaacagataactgagaaggaggagaagactaggaagaccctgctggctgcc
aagcaaaaaattgcacagttagctggtacgaaagaacagctgacaaaagaaaatgacgag
tggaaacaaaagagtagtgcattagaagagcagaagactgagttggaggtgcggatgagt
gcactcaaatcacaatatgaaggtcgaatttgccgcctggagagagagttgagagagcaa
caagagaggcaccatgaacagcgagatgagcctccagagtctactaataaggttccggaa
cagcagagacagatcacactcaaatctactccagcttcaggtgaaagaggaattgctagc
acttcagatccaccaacagcaaacattaagccaacgcctgttgtgtcaactccaagtaaa
gtgactgctactgccatacctgggagtaaatctactccaagagcaagtatccgtccaatg
gttactcctgctacagttacaaatccaaccactactccaacagccacagttatgcctaca
acacaggtggaaacccaagaagctatgcagtcagaaggaccagtagagcatgttccagtc
ttcggaagcacaagtggatctgtacgctccaccagtcctaatgtccagacatctctctct
caacccatcttaactgttcagcaacagactcaagctacagcttttgtgcagcccactcag
caaagtcatcctcagattgagccagcgactcaagagccaccccccaccattgtagaggtc
gtacagagctcacagatagaaaggccctccacttccacagcagtgtttggtacagtttca
gctaccccaagttcttccttgcccaagcgtccacgagaggaggaagaggataacacagta
gaaaacactgaacaaatttcagaggaaacagtggatatacctcttccaaagaaacagaga
agcgtgcagagagttgaacctgaggaggaaatcacagcagaagaaagcactgatggtgag
gtagaaactcaaatttacaatcaagattctcaagactccattggagaaggggtcacccag
ggagagtacgctcccatggaagacagtgaagaaacctctcagtcccttccaatagatctt
ggacctcttcagtccgatcaacagaatacctcatcgtcccaggatggtcagtccaagaga
gatgatgtcattgtgattgacagcgatgacgaagaggatgatgaggaagaaaatgaaggc
gagcaagaagattatgaagatgaggaagaggaggatgaagatgatgatgaagatacagga
atgggggatgaaggtgatgatagtaatgaaggaactgggagtgctgatggcaatgatgga
tatgaagcagatgatgctgagggtgctgatggtacagatccttgtacagaaactgaagag
agcatgggaggtggagaaagcaaccagagagcagcagattctcaaaacagtggcgaagga
agtacaagtgctgcagagtcaactttctcccatgaaagttcaagagaacagcagccaaca
tctgcctcggagaggcaggcttctcggctacctcagtcaccacgcagaccaccacatcct
ctacccccacgactgactattcatgctccaccccaggaactgggtccaccagtacagaga
atccagatgactcggaggcagtcggtgggccgtgggcttcaactaactcctggcataggg
ggcatgcagcaacacttttttgatgatgaggacaggaccgttccaagcaccccaactctt
gtggtaccacatcgtacagatggatttgcagaagcaattcattccccccaggttgctgga
gttcccagattcaggtttgggcctccagaagatatgccacagactagttccagccactcc
gatcttggccagcttgcatcacaaggaggtttagggatgtacgaaacaccactcttcctt
gcccatgaagaagaatctggtggccgcagtgttccaacaactccactgcaagttgcagca
ccagtgactgtttttactgaaagcaccacagctgatccttcagagcatgcttctcagtct
gttccaatggttacaacgtctactggcagtttatccgctactactgaatctggagtgggt
gatgatggggatgaggtttttgtggaagcagaatctgaaggaattacgtcagaagctggt
ctagaaattgatagccagcaagaagaagaatctgttcaagcacctgatgagtcagacctc
ccttccaccagtcaggatcctccttccagctcatcagcagacacaagcagtaatcagcca
aagccttttcggcgtgtcagacttcagccaccaacattaagaactggtgtccgtggtcgt
cagtttaacaggcagaggggtgtaactcatgcaatgggaggcagaggaggcctaaacaga
ggcaatattagttag
DBGET
integrated database retrieval system
