Chelonoidis abingdonii (Abingdon island giant tortoise): 116827504
Help
Entry
116827504 CDS
T07367
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04020
Calcium signaling pathway
cabi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116827504 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116827504 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cabi04040
]
116827504 (GRIN2C)
Ion channels [BR:
cabi04040
]
Ligand-gated channels
Glutamate (ionotropic)
116827504 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
116827504
NCBI-ProteinID:
XP_032640966
Ensembl:
ENSCABG00000011832
LinkDB
All DBs
Position
Unknown
AA seq
1386 aa
AA seq
DB search
MGRALTHTLVLSMVLGCSAVIMDLLLPSRGEPVVNVAVVFGGSSYPLHIRSRLTHQSFLD
LPLEIHPVTVIVNDTNPGTLLTQICNILASTKIHGIVFEDNIGTEAVAQILDFISSQTQV
PIISISGGSAVVLTPKESGSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNI
FVDVIRSFTDASYFGWELQDVLTFEMTQDGSNSKTQRLLRQIDAQVMIVYCSWEEAVYLF
QVAEQAGLVGPGYIWIVPSLTVGNVEIPPVSFPVGLISVVTESWKMSLRQKVRDGVAIIA
TGAESYFRTHGYLPDVGKDCKTPPTTTANSTFYRHLLNVTWEHRDFSFNEGGYLVRPTMV
VISLNQHRLWEMVGKWEKGIIHMKYPVWPRYGSFLQPVSDNRHLTVATLEERPFVIVENT
DPASGVCVRNTVPCRKQTNYTNSGDGPVDPYTKLCCKGFCIDILKKLAKAVKFSYDLYLV
TNGKHGKIVRGIWNGMIGEVYYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARS
NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVGYNQNLTSGKKSGGPSFT
IGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYID
TVSGLSDKKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTSL
KMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSKWKRPIDLALL
QFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHL
VYWKLRHSVPKSHKLDFLLAISRGIYSCFNGVQNLESPVRVRTPNVTANSAQANVLKMLQ
AAKDMVSTATVGSSLENATRTIENWTNQSENLQTMFSLRTPQLVVQNTSVSNRPPYSSNV
ATTEKLGRDCAQRTVPPPIPAPQQPFVDSRLPANENWRAVNEQPPILHPLKFRGSYSGDK
VLPGSTVGGFPHLLVRTMPPSHFGSHVPLGNHLSTPLSPLKTQRELPLPDIYKEHKRPVS
KREEKEKLPPNVHLVYGEGRHGGPAQLAKLFSTSEKSPFLPPDCMHSSFSKADRPCRPLV
TVFKEPEPVELPLLGKEKPNRRASLLRSAWEQNEKHHSLGIQRYNGKSSARGDVPDLFPK
VSVALRQTSMYYPTETLRPSAICNRKRMEANSRLSWKGQRFLHSQAARLPSYRKACLQNA
TGMHQASSTVMHKQYAYVNSYTNLPMYLGRLYQGPPPLCEHSRTSQHCVTRAPWAPRSRD
YLVQEDSRRTMYFDSVYRDCTERSRAEPSFLQMVNTERRDLLAAQRMNSPYAAQSWRRIS
SLESEV
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagctctgacgcacactctggtactgtccatggtgctgggctgttcagctgtc
ataatggatctcctgctgccaagccgtggggagccagtggtaaatgtggctgtggtattc
gggggctcctcataccctctccacatccgcagccgtctgactcaccagagcttcctggac
ctgcctctggagatccacccggtcacagtgattgtgaacgacaccaaccccggcaccctc
ctgactcagatctgcaacatcctcgccagcaccaagatccacggcatcgtctttgaggac
aacattggcacagaggctgtggcacagatcctggacttcatatcctcccagacccaggtc
cccatcatcagcatcagtgggggctctgccgtggtcctgacccccaaggagtccggctct
gccttcctgcagctgggagtctccatcgagcagcagatccaggtgatcttcaaagtcctg
gaggaatatgactggggctcctttgcggtcatcaccagcctgtatccagggtacaacatc
ttcgtggatgttatccgttccttcacagacgccagctactttggttgggaactccaggat
gtcctgacctttgagatgacccaggatgggagcaactccaaaacccagcggctgctacgg
cagattgatgcccaggtgatgattgtgtactgctcgtgggaggaggctgtgtacctcttc
caggtggcggagcaggcaggcttggttgggcccggctacatctggattgtgcctagcctg
acggtggggaacgtggagatcccgcctgtctctttccccgtcggcctcatcagcgtggtg
accgagagctggaagatgagcttgaggcagaaggttcgggacggcgtggccatcattgcc
acgggggctgagagctacttcaggacccatgggtacctcccagatgtgggcaaggactgt
aagacgccacctaccaccaccgccaacagcactttctacaggcacctgctgaacgtgacg
tgggaacacagggacttctccttcaatgaaggtggctacttggtgaggcccaccatggtg
gtgatctcactgaaccagcatcggctctgggagatggtggggaaatgggagaaggggatt
atccacatgaagtacccagtgtggccccgctatggctccttcctgcagcccgtgtcggat
aatcgccacctcactgtggccaccctcgaagagagaccctttgtgattgtggagaacacg
gacccggcctctggcgtctgtgtgcgcaacaccgtcccctgccggaagcaaaccaactac
accaacagtggggatggacctgtggacccctacaccaaactctgttgcaagggcttctgc
attgatatcctgaagaagctggccaaggcagtgaagttctcctatgacctctacctggta
accaatggaaaacatgggaagatagtgcgtggcatctggaatggcatgattggcgaggtg
tactaccagcgcgcggacatggccatagggtccctcaccatcaacgaggaacggtctgag
atcgtggacttctctgtgccctttgtggagaccggcattagtgtcatggtggctagaagc
aatgggacagtctcgccttctgccttcctagagccctacagcccggcggtgtgggtgatg
atgttcgtgatgtgtctcactgtggtcgccatcaccgtcttcatgtttgaatatttcagc
cctgtcggctacaaccagaatctaaccagtggcaaaaaatccggcgggccctccttcacc
attggcaaatctgtctggctgctgtgggccctggtctttaataactcagtgcccattgag
aatccaaaaggcaccacaagtaagatcatggtgctgatctgggccttcttcgcagtgatc
ttcctggctagttacacagctaacctggcagcctttatgatccaggagcaatatatcgac
actgtctctgggctgagtgacaagaagttccagcggccccaggagcagtatcccccattc
cgcttcggtactgttcccaacggcagcacggagagaaacattcggagcaactatccagat
atgcacacgcacatggtgaaatacaaccagcgctcagtggaagatgccctgaccagcctc
aaaatggggaagctggatgcctttatctacgatgccgctgtgctgaattacatggctggc
aaggatgagggctgcaagctggtgaccatcggcagtgggaaggtctttgctaccaccggc
tatggcattgctctgcagaaggattccaagtggaagaggccgattgacttggcccttctg
cagttcctgggagacggggaaacccagaaactggagaccgtgtggctgtcagggatctgc
cagaatgagaagaacgaggtgatgagcagcaagctagacattgataacatggccggagtc
ttctacatgctgttggtggccatggggttgagcctgctggtctttgcttgggagcacctg
gtgtactggaaactgcgccactctgtccccaagtcgcacaaacttgacttccttctggcc
ataagcaggggcatttatagctgtttcaatggagtccagaatctggagagccctgttcgt
gttcgcactcccaatgtcaccgctaactctgcccaagccaatgtgctgaagatgctgcag
gctgccaaggacatggtgtcaacagccactgttgggagctcccttgagaatgccacgcgc
actattgagaactggacgaatcagagcgaaaacctccagaccatgttctcccttcgaact
cctcagcttgttgtccagaacaccagtgtgtccaacaggccaccctactcctccaatgtg
gccacaacagagaagcttggacgggactgtgctcagaggactgttccaccacccatccct
gctccccaacagccctttgtggactccaggctgccagctaacgaaaactggagggcggta
aacgagcaacctccaatacttcaccccctaaagtttagaggaagctattctggggataaa
gttcttccaggttccaccgtgggtggctttccgcacctcctggtgagaaccatgcctcca
tcccatttcgggagccacgtgcccctgggaaaccacctgagcactcccctctcaccactg
aaaactcaaagggagcttccccttccagacatctacaaagagcacaagcgccctgtgtcc
aagagagaggaaaaggagaagcttccaccaaatgttcacctggtgtacggggaaggaaga
catgggggcccagcccagctggcaaagctgttttccacttccgagaagagccctttcttg
cctccagactgcatgcacagctccttctcaaaagccgacaggccttgcagacccttagtt
actgtgttcaaggaaccggaacctgtggagctacctcttctgggcaaggagaagccaaac
aggagagccagcctgctgaggtctgcctgggagcagaatgagaaacaccattccctaggc
atccagagatacaacggcaagtcttccgcccgaggggatgtgccagatctattccccaaa
gtcagtgtggcgctgaggcagacatcaatgtactatcccactgaaaccctcaggcccagt
gctatatgcaacagaaaacgcatggaggcaaactccaggctctcttggaaaggacaacgg
ttcctgcactctcaggcagcgaggctaccctcttacaggaaggcatgcctgcagaatgcc
accggcatgcaccaggcctcctctaccgtgatgcacaaacagtatgcctacgtgaactcc
tatacaaacctgcccatgtacttggggcggctttaccaggggcctccgccgctctgtgaa
cactccaggaccagccagcactgtgtcactcgggctccctgggcacccaggagcagggac
tatttggtccaggaggacagccggaggaccatgtacttcgacagcgtatacagagactgt
acagagcgaagcagagcagagccatccttcctccagatggtcaatacggagaggagggac
ctcctggcagcccagagaatgaacagtccttacgctgctcagtcctggagacgaatctct
agcctagagtctgaggtgtga
DBGET
integrated database retrieval system
