Chelonoidis abingdonii (Abingdon island giant tortoise): 116831030
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Entry
116831030 CDS
T07367
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi00310
Lysine degradation
cabi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116831030 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116831030 (PRDM6)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116831030 (PRDM6)
Enzymes [BR:
cabi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
116831030 (PRDM6)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116831030 (PRDM6)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116831030 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
116831030
NCBI-ProteinID:
XP_032646657
Ensembl:
ENSCABG00000020312
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MLKPGDPGGSAFLKMDPAYLQHWQQLFPQSSQLKSSGALTQLPPPERADPSADSLRQRPA
SLSSASSSSSSSTPSSSTSSCAASAASLAGLTSISVAQIPVFGQLPISESPSAAPASLQS
KDLCGGGAKCSERAAPRFRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADNRNG
ECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGICAAQRI
QQGTWIGPFQGVVLLPEKVQTGVIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRC
ARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVP
STVMEAMSRPDTLQPFNKSSKLPPATPQRSIVFPQTPCSRNFSLLDKSGPIESGFNQINV
KNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRNSQQSHLGG
SRKGPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEK
PFKCERCERSFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcccggcgacccaggcggatctgctttcctgaagatggatccagcttatctc
cagcactggcagcagctgttcccgcagagcagccagctaaagagcagcggggccctcacc
cagctcccgccgcccgagagagcggatccctcggctgacagcctccgccagcgcccagct
tctctctcctccgcttcttcttcctcctcttcgtccaccccatcttcttccacctcctct
tgcgccgcctccgccgcttccctggccgggctgacctccatctctgtggcccagattccc
gtctttgggcagctaccaatctccgagtccccctccgcagcgccggcctccctgcagagc
aaagacttgtgcggcgggggcgccaagtgcagcgagcgggctgcgcccaggtttcgatgt
acagcagaggagctggactattacctgtatggacagcaacgcatggagatcatccccctg
aaccagcacaccagtgaccccaacaaccgatgtgacatgtgtgctgataatcgcaatggt
gagtgccccatgcatgggccacttcactctctgcgccgcctagtgggcactagtagtgct
gcagccgcagcacctccgcctgagatccctgaatggctcagggacctcccccgggaagtg
tgtctgtgtaccagcactgtgcctggtctggcctatggcatctgcgctgctcagaggatc
cagcagggcacctggattgggcctttccagggagttgtccttctgccggagaaggttcaa
acgggagtcatcaggaacactcagcacctctgggaaatatatgaccaagatgggacacta
cagcactttattgatggtggggaacccagtaagtcaagttggatgaggtatatccgatgt
gcaaggcattgtggggagcagaacctaacagtggttcagtacaggtcaaatatattctac
agggcctgtatagatatccccagaggcaccgaactgctggtgtggtacaatgacagctac
acatctttctttggaatccctttacagtgtattgcacaggatgaaaacttgaatgtccct
tcaactgtaatggaggccatgtccagaccagataccctacagccatttaacaaaagtagc
aaactaccccctgccacaccacagcgatccatagtatttccacagactccatgtagcaga
aatttttctcttctggataagtctgggcctatcgagtcaggatttaaccagatcaatgtc
aaaaaccaacgagttcttgcaagcccaacgtcaacgagccaattaaattctgagttcagt
gactggcacctttggaaatgtgggcaatgctttaagactttcacccagcggatcctctta
cagatgcacgtgtgtacgcagaaccctgacagaaattcccaacaatcccatttggggggc
tccagaaagggaccctatcagtgtggccactgctcccaatccttctcccaaccttcagaa
ctaaggaaccacgtagtcacccattccagtgacagacctttcaagtgcggctattgtggt
cgtgcctttgctggtgctacaacactcaacaatcatatccggacgcatacaggggaaaaa
ccctttaagtgcgagagatgtgagaggagcttcacacaagccacccagctgagtcgacac
cagaggatgcccaatgagtgcaagccaataacagagagcacagaatcaattgaagtggat
taa
DBGET
integrated database retrieval system
