Caldithrix abyssi: Cabys_1696
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Entry
Cabys_1696 CDS
T04549
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
caby
Caldithrix abyssi
Pathway
caby03030
DNA replication
caby03410
Base excision repair
caby03420
Nucleotide excision repair
caby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cabys_1696
03410 Base excision repair
Cabys_1696
03420 Nucleotide excision repair
Cabys_1696
03440 Homologous recombination
Cabys_1696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caby03032
]
Cabys_1696
03400 DNA repair and recombination proteins [BR:
caby03400
]
Cabys_1696
Enzymes [BR:
caby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cabys_1696
DNA replication proteins [BR:
caby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cabys_1696
DNA repair and recombination proteins [BR:
caby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Cabys_1696
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cabys_1696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
DUF2203
HHH_5
Motif
Other DBs
NCBI-ProteinID:
APF18445
UniProt:
H1XRH0
LinkDB
All DBs
Position
complement(2019881..2022607)
Genome browser
AA seq
908 aa
AA seq
DB search
MSKKLFLIDGSAMYYRSYFAFSRNPLINSKGENTSATFGFLNSLLKIIDREHPEYLAIVF
DTKEPTFRHKIYEEYKATREKMPDEMAAQFPRLVETLKAANFALLEKDGYEADDIIGTLA
TRFASDEVDVYIVSGDKDMAQLVNGHVFLYNLKKQDEPEILDRQKIVEKYGVQPEQIIDW
LALMGDKSDNIPGVPKVGEVTAAKLLQQFGSIDNLYKNIDAISREALKKNLLAARDQVQI
ARRLTTIDTNVPIDVKLEDLKFRMWDMETVGPILQELEFRGLANRMKAMSLGQEEAMELR
KFNSKDVRYQLIESEEEFDRLLDTLKEQKEFVFDLETSSLDFLEAEIAGISFCWDAGQAS
YIALGHEPRGLDRNKTLEKLRGVFADPQIRKIGQNIKYDAMIMEQHGVPVKNLYFDTMIA
SYLINPTGQHNLDYLAEHYLNYKMIPIEDLIGKKGRNQKKMTDLAAGLVYQYACEDADIT
YRIYQILKKDLKKHGMESLFYELEMPIVHVLMQMEMHGVKVDRKLLEELSDQLGRKIKAI
EQKVYQAAGEEFNLNSPQQLGVILFDRLEIHKELGMRKPSKTKTGQYSTSEKTLERYASH
PLVADIMEYRKLIKLKSTYLDALPQLINPRTGKIHTSYNQTVTATGRLSSSNPNLQNIPI
RTDLGREIRRAFIPSKDDYLILSADYSQIELRIMAHLSGDETMISNFKKNLDIHAATAAL
IFGISVEEVTADHRRKAKEINFGIIYGMSEYGLANRLNISTDEAKEFIADYFATYPKIGE
FMQRMIEEAREKGYVETMLGRRRYLPEIRNPNRQIREFAERTAINTPIQGSAADLIKKAM
ITIQTFIENVGFPAQMLLQVHDELVFEVQKKRSDEFAKKVKEIMEGAMELRVPLVVECGV
GPNWLEAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaactttttttgattgacggttcggccatgtattaccgcagctactttgcc
ttcagtcgaaatccgttgattaactccaaaggcgagaacacctccgccacttttggcttt
ttaaactccctactcaaaatcatagaccgggaacatccggaatacctggccattgtgttt
gacaccaaagagccgacttttcgccataaaatttatgaagaatacaaggccaccagagaa
aaaatgcccgatgagatggcggcccagtttccgagactggtggaaacattaaaagccgcc
aattttgcgttattggaaaaagacggctacgaagccgacgacatcatcggtacgctggcc
actcgctttgccagcgacgaggttgacgtttacattgtctccggcgataaggacatggcg
caactggtaaacggacacgtttttttatacaaccttaaaaagcaggatgagccggaaatc
ctggatcggcaaaaaattgtggaaaaatatggcgtgcagcccgagcaaattattgactgg
ctggccctcatgggcgataaatccgataatattcccggcgtgcccaaagtgggcgaggta
acggccgccaaattattacagcagttcggatccattgataacctttacaaaaacatcgac
gccatctccagagaggcgttgaaaaaaaacttattggcagccagagatcaggtgcaaatc
gcacgccgtctgacgaccatcgacaccaacgttcctattgatgttaaactggaagatttg
aaattccgcatgtgggatatggaaacggttgggcccatattgcaggagctggaattcaga
ggcctggccaaccgcatgaaggccatgagcctgggtcaggaagaggccatggaattgcgc
aaattcaactctaaagatgtccggtatcagttgattgaaagcgaagaggaatttgaccgg
ctgttagatacgctcaaagaacagaaagaatttgtctttgatctagaaaccagttcgctg
gattttctggaggccgaaatcgccggcatctctttttgctgggatgcaggtcaggcctcg
tacattgccctgggccatgaaccgcgagggctggatcgcaataaaacgctggaaaaactg
cgtggagtgtttgccgatccacaaattcgaaaaatcggacagaacataaaatacgacgcc
atgatcatggagcaacacggcgttccggttaaaaatctctattttgacaccatgatcgct
tcgtacctgattaatcctaccggccaacacaatctggattatctggccgagcactattta
aactacaaaatgattcccattgaagacctgatcggtaaaaagggccgcaatcaaaaaaaa
atgaccgacctggccgccggtctggtttatcaatatgcctgcgaagatgccgacatcacc
tatcgcatttaccaaattttaaagaaagaccttaaaaagcatggcatggagtctttgttt
tatgagctggaaatgcccatagtccatgttctgatgcaaatggaaatgcatggcgttaaa
gtcgatcggaaattgctcgaagaactgagcgatcaactgggccgcaaaataaaagccatc
gaacaaaaggtttatcaggctgccggcgaagaatttaatctcaactctccccagcagctg
ggcgtgattctttttgacaggcttgaaatccataaagagctgggtatgcgcaaaccttcc
aaaaccaaaacaggacagtactccacctctgaaaaaacactggaacgctacgcgtcccat
ccgctggtggccgacatcatggaatatcgcaaactaatcaaactcaaaagcacctatctg
gatgccctgccccagttgatcaatccccgaacgggcaaaattcacacttcttacaatcag
acagttacggccaccggccgtctttcttccagcaaccccaatctgcagaacattcccatc
cgcaccgacctgggccgtgaaatccgccgcgccttcattccttcaaaggacgattatctg
attctcagcgccgattactctcagatcgagttgcgcatcatggcccatctttccggcgat
gaaaccatgatttccaatttcaagaaaaacttagacatccatgcagcaaccgccgctttg
atttttggtatttcggtggaagaggtgacagccgatcatcggcgtaaggccaaagagatc
aactttggcatcatttacggcatgagtgaatatggtctggccaatcgcttaaatatctct
accgatgaagccaaagagtttatcgccgattattttgccacctatcctaaaatcggcgaa
tttatgcagcgcatgattgaagaggcgcgcgaaaaagggtacgtggaaaccatgctcggt
cggcggcgctatttaccggaaatccgcaatcccaaccgccagattcgggaatttgctgaa
cgtacggccattaatacgcccatccagggctcggcagccgacctgatcaaaaaggcgatg
attaccatccaaacttttattgagaatgtaggttttccggcgcaaatgttgctacaggta
catgacgaactggtgtttgaagtccagaaaaagcgctctgatgaatttgcgaaaaaggta
aaagaaatcatggaaggcgccatggagctgcgtgtgcctttggtggtggaatgcggtgtg
ggcccaaactggcttgaggcgcattag
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