Caldithrix abyssi: Cabys_1818
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Entry
Cabys_1818 CDS
T04549
Symbol
glnS
Name
(GenBank) glnS glutaminyl-tRNA synthetase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
caby
Caldithrix abyssi
Pathway
caby00970
Aminoacyl-tRNA biosynthesis
caby01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Cabys_1818 (glnS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
caby01007
]
Cabys_1818 (glnS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caby03016
]
Cabys_1818 (glnS)
Enzymes [BR:
caby01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
Cabys_1818 (glnS)
Amino acid related enzymes [BR:
caby01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Cabys_1818 (glnS)
Transfer RNA biogenesis [BR:
caby03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Cabys_1818 (glnS)
Prokaryotic type
Other AARSs
Cabys_1818 (glnS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
APF18567
UniProt:
H1XSK9
LinkDB
All DBs
Position
complement(2159757..2161445)
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AA seq
562 aa
AA seq
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MSAENNKKPTNFIKQIIDEDLASGRFDRVHTRFPPEPNGYLHIGHAKSICLNFGLAEEYN
GKCNLRFDDTNPLKEDQEYIDAIIEDVRWLGFDWEDRLFYASDYFEKMYEYAVQLIKMGK
AYVDDLSAEEIKEYRGTLTKPGKESPYRNRSVEENLDLFERMRKGEFKDGEKVLRAKIDM
QSGNLNMRDPVMYRIIHASHPRTGNQWCIYPMYDWAHGLEDSIEGITHSICTLEFEDHRP
LYDWFLDQLGVFHPRQIEFARLNLTYTVMSKRKLLRLVQEGYVSGWDDPRMPTISGLRRR
GYTPEAIRDFADRIGVAKSNSVVDFALLEHCLREDLNKRAERRMVVLNPLKVIIENYPED
QVEELEAENNPEDPEAGTRKVPFSKIIYIEREDFREEAPKKWFRLAPGKEVRLKHAYYIT
CQKVIKDENGQVVELRCTYDPQSRGGWTQDGRKVKGTLHWVSAEHAVPVEIRLYEQLFLK
EDPEDVEEGQDFTANINPNSLTVIKNALAEPDLKKAKAGQRYQFLRQGYFCADLKDHSAE
HLVFNRTVTLRDSWAKIEKKLK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagagaacaacaaaaaaccgaccaatttcatcaaacaaatcatcgacgaagac
ctggccagcggccggttcgaccgcgtccatacgcgtttcccgcctgaacccaatggctac
ctgcacatagggcatgccaaatctatttgcttgaatttcggcctggctgaggaatacaac
ggcaaatgtaatttgcgctttgacgacaccaatcctttaaaagaagatcaggaatacatc
gacgccatcatcgaagatgtgcgctggctgggtttcgactgggaagatcgcctgttttat
gcatccgattattttgagaagatgtacgaatacgccgtacaactgattaaaatgggcaag
gcctatgtggatgatctttctgcggaagagataaaggagtatcgcggaacgcttaccaaa
ccgggcaaagaaagcccatatcgcaatcgcagcgtggaagagaacctggacctgttcgaa
cgcatgcgcaaaggcgaatttaaagacggcgaaaaagtactgcgcgctaaaatcgacatg
caatctggcaacctgaatatgcgcgatccggtcatgtaccgcatcattcatgccagtcat
ccacgcaccggcaaccaatggtgcatctatcccatgtacgactgggcgcacggtctggaa
gattccattgagggcattacacactccatctgtaccctggagttcgaggaccatcgtccg
ctgtacgactggttccttgatcaattgggagtatttcatccgcggcagatcgagtttgcc
agattgaacttgacgtacaccgtaatgagtaaacgcaaattgctgcgcctggtgcaggaa
ggctatgtttcgggttgggacgatccgcgcatgccgaccatctctggtctgcgtcgccgc
ggttacaccccggaggccattcgcgattttgccgatcgcattggcgtggccaagtccaat
agtgtggtggatttcgccctgttagaacactgcctgcgcgaagatttaaataaacgcgcc
gaaagacgcatggtcgttttaaatccgcttaaggtgattattgaaaattatcccgaagac
caggtagaagaacttgaagccgaaaataatccggaagaccctgaagccggcacccgcaaa
gtacctttttcaaaaatcatctacatcgaacgcgaggactttcgtgaagaagcgcctaaa
aaatggtttcgcctggctcccggtaaagaggtgcggcttaaacatgcctactacatcacc
tgccagaaagtaatcaaggacgaaaacggccaggtggttgaactgcgatgtacctacgat
ccgcaatcacggggcggatggacgcaggacggccgcaaggttaaaggaacattacactgg
gtttcggccgaacatgccgtgccggttgagattagactgtacgaacaattattcttaaaa
gaagacccggaagatgtggaagaaggacaggatttcacggccaatatcaatcccaattca
ctgacggttattaaaaacgcgcttgctgaaccggatttgaaaaaggccaaagccggccaa
cgctaccagtttttacgacagggttacttttgcgccgaccttaaggatcattcggccgaa
catcttgtttttaaccgcacggttaccctacgcgatagctgggcaaaaattgaaaaaaag
ttaaaataa
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