Caldithrix abyssi: Cabys_3238
Help
Entry
Cabys_3238 CDS
T04549
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase precursor
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
caby
Caldithrix abyssi
Pathway
caby00540
Lipopolysaccharide biosynthesis
caby01100
Metabolic pathways
caby01250
Biosynthesis of nucleotide sugars
Module
caby_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Cabys_3238
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
caby01005
]
Cabys_3238
Enzymes [BR:
caby01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
Cabys_3238
Lipopolysaccharide biosynthesis proteins [BR:
caby01005
]
Core region
Cabys_3238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Ldh_1_N
adh_short
Motif
Other DBs
NCBI-ProteinID:
APF19986
UniProt:
H1XQY0
LinkDB
All DBs
Position
complement(3860892..3861854)
Genome browser
AA seq
320 aa
AA seq
DB search
MIIVTGAAGFIGSCVVSRLNKEGITDIIAVDVLRENDKWKNLRHLDFVDYLDREQLFDFL
EGAANIEAIIHMGACSATTERNAHYLMENNYRYTLKLAQFAMNHGARFIYASSGATYGLG
ELGYDDDEDNIHRLRPLNMYGYSKQLFDLKARREGWFKNIVGLKFFNVYGPNEYFKGDMA
SVVFKAFNQIRQTGSVRLFKSHRPDFKDGEQLRDFVYVKDVLEVILFFLQNPDKNGLFNV
GSGKARSFLDLVNATFAAMGKKPEIIFFDMPEHLRDRYQYFTEARIEKLRKAGYQKEFAS
LERGIEDYVRNYLLKDYAHY
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtcaccggagctgcaggatttatcggaagctgcgtggtgtcccgcttgaat
aaagaagggatcaccgacattattgcggtagacgttttgcgggaaaacgacaaatggaaa
aaccttcgccatctcgattttgtcgattacctcgatcgagaacaattgttcgattttctg
gaaggcgccgccaacatcgaagccattattcacatgggcgcctgtagcgccaccaccgag
cgcaacgcacactacttgatggaaaacaactatcgctacaccttaaaactggcgcagttt
gccatgaaccacggagcgcgtttcatctatgccagctccggcgcaacctatggcctgggc
gagttaggatacgatgacgacgaagacaacatccatcgcctgcgtccgctgaacatgtac
ggctattccaaacagttgttcgacttaaaagcccggcgcgagggatggtttaaaaacatc
gttggcctgaagttctttaatgtttacgggcccaacgagtattttaaaggcgatatggcc
tccgtggtttttaaggcctttaatcaaattcggcaaacgggttctgtgcggctttttaaa
tcgcaccgcccagattttaaagacggtgaacagttgcgcgattttgtttatgtaaaagat
gtgctggaagtgattctattttttctgcaaaatccggacaaaaacggtttgttcaacgtg
ggctccggcaaggcgcgttcgtttttagacctggtgaacgccacctttgccgcgatgggc
aaaaagccggaaattatcttttttgatatgccggaacatttgcgcgaccgctaccaatac
tttaccgaagccagaatcgaaaagctgcgcaaggctggctatcaaaaagaattcgcctca
ctggagcgcggcattgaggactatgtgcgaaattatctgttaaaagattatgcgcattac
taa
DBGET
integrated database retrieval system
