Caldithrix abyssi: Cabys_3986
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Entry
Cabys_3986 CDS
T04549
Symbol
trpB
Name
(GenBank) trpB tryptophan synthase beta chain
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
caby
Caldithrix abyssi
Pathway
caby00260
Glycine, serine and threonine metabolism
caby00400
Phenylalanine, tyrosine and tryptophan biosynthesis
caby01100
Metabolic pathways
caby01110
Biosynthesis of secondary metabolites
caby01230
Biosynthesis of amino acids
Module
caby_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Cabys_3986 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
Cabys_3986 (trpB)
Enzymes [BR:
caby01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
Cabys_3986 (trpB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
APF20731
UniProt:
H1XX33
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All DBs
Position
4726542..4727906
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AA seq
454 aa
AA seq
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MQVKVVLNEDEMPRQWYNLAPDLPTPVPPPLGPDGKPISPDMLAPVFPMNLIEQEVSQER
WIDIPEEVLALLYRWRPTPLHRAYALEKFLGTPAKIYYKNESVSPPGSHKPNTAVVQAWY
NKQFGIEKLTTETGAGQWGSALSFAGALVGLEIKVYMVRISFDQKPFRKIMMETWGGKCI
PSPSPYTKTGRKILKEQPDTPGSLGIAISEAIEEAVTDPSGKTRYSLGSVLNHVMLHQTI
IGLEVKKQLEKIGEKKVDVVIGCAGGGSNFAGLAFPFMYDKINGAEIDIIPVEPASCPTM
TRAPYVYDFGDTAEMTPLLPMHSLGHAFIPPPIHAGGLRYHGIAPLVSGAINDGLATPKA
LHQLECYEAAVTFARTEGIIVAPETSHAVAAAIQEAKKAKEEGKEKVILFNLSGHGLMDL
TGYQKYFEGELQDYALPDEEMQKFLKVLDGLPKP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaaagtcgttctaaacgaagatgaaatgccgcgtcaatggtacaacctggcg
cccgatttgcccacgcccgttccgccgccgctgggtccggacggcaaaccgatttcgccg
gatatgctggcgcccgttttccccatgaacctgattgaacaggaagtcagtcaggagcgc
tggattgacattcccgaagaagtgctcgcgcttttgtaccgctggcgtccaacgccgctg
catcgcgcgtacgctctggaaaaatttttaggcacgccggctaaaatttactacaaaaac
gaaagcgtttcgcctccgggtagccataagcccaacacagccgttgttcaggcctggtac
aacaaacaatttggcatcgaaaaattgaccacggaaaccggcgccggtcagtggggcagc
gccctttcctttgccggagccctggtggggctggaaatcaaagtgtacatggtgcgcatt
agctttgatcagaaaccgttccgcaaaattatgatggaaacctggggcggtaaatgcatt
cccagtcccagtccttacaccaaaaccggtcgtaaaattctcaaagagcaaccagatacg
cctggcagcctcggcatcgccatcagcgaagccattgaagaggccgtgaccgatccttcg
ggcaaaacgcgctactcgttaggcagcgtgttgaaccacgtaatgctgcatcagaccatc
atcggtctggaagtgaaaaagcagctggaaaaaatcggcgaaaagaaggtagatgtggtc
atcggctgcgccggcggcggcagcaactttgccggattggccttcccctttatgtacgac
aaaatcaacggcgccgagatcgacatcattcctgtagagccggcatcctgcccgaccatg
acgcgcgcgccgtacgtttacgattttggcgacaccgcggaaatgacgccgttgctgccc
atgcactcactgggccacgcctttattcctccgcccattcacgccggcggtttgcgttat
cacggcatcgcgcccctggtaagcggagcgattaacgacgggctggccacgcccaaagcg
ctgcaccagttagaatgctacgaagcggccgtgacctttgcccgcaccgaaggcattatc
gtggcgccagaaaccagccacgccgttgccgcggccattcaggaagccaaaaaagccaaa
gaagaaggcaaggaaaaggtcatcctctttaacctgagcggtcacggcttaatggacctg
acaggctatcaaaaatattttgaaggcgaactgcaggactacgctttgcccgacgaagag
atgcagaaattcctgaaagtgctggatggtttacccaaaccgtaa
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