Corynebacterium afermentans subsp. lipophilum: CAFEL_02940
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Entry
CAFEL_02940 CDS
T09361
Symbol
gabD1
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] 1
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00250
Alanine, aspartate and glutamate metabolism
cafe00310
Lysine degradation
cafe00350
Tyrosine metabolism
cafe00650
Butanoate metabolism
cafe00760
Nicotinate and nicotinamide metabolism
cafe01100
Metabolic pathways
cafe01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CAFEL_02940 (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CAFEL_02940 (gabD1)
00310 Lysine degradation
CAFEL_02940 (gabD1)
00350 Tyrosine metabolism
CAFEL_02940 (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CAFEL_02940 (gabD1)
Enzymes [BR:
cafe01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CAFEL_02940 (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CAFEL_02940 (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CAFEL_02940 (gabD1)
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Motif
Pfam:
Aldedh
LuxC
GYD
PRONE
Motif
Other DBs
NCBI-ProteinID:
WJY58372
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Position
620965..622338
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AA seq
457 aa
AA seq
DB search
MSNQYRVQNPATNEVIETFDFATDQEIQDILDRSEAAFKTWRKTSYEERAEIVGKAAQLL
KERSNELAQIMASEMGKSVPEGAWEADFSGDILQFYADNAAEHSADKKVDVPGGKAVVRR
LPLGTLLGIMPWNFPIYQVARFAGPNLMNGNCIILKHAEITPKSGAAFEEILKEAGLPDG
VFINVYATHEQVETIIADPRVQGVSLTGSERAGAKVAETAGKNLKKVVLELGGTDPYVIL
DSSDIKAAAQDAWAKRVQNAGQVCTSNKRIIVMEDIYDEFVDEMVAIADSFKKGDPSNPG
ENEYYPMSSRRAAELLDDQVKRAVEKGAKLRTGGVLEDNSAYYSPAVLTDLPVGSDEYYE
EFFGPVAEIYKVSSEEEAVELANNSYQGLGGAVFSDDTERAIKVADQIDTGMIHVNLGQY
FSAVLPFGGVKRSGFGRELSVFALDEFVNKQYLYVND
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccagtaccgcgtgcaaaaccctgcgaccaacgaggtcattgaaaccttcgac
tttgccactgaccaggaaatccaggacatcctggaccgctcagaagcggctttcaagacc
tggcgcaagacttcctacgaggagcgcgctgagatcgtgggcaaggcggcgcagctgctc
aaggagcgctcgaacgagctggcccagatcatggcctcggagatgggcaagtctgtgccg
gaaggtgcgtgggaggccgacttttctggcgacatcctgcagttctacgcagataacgcc
gctgaacactctgccgacaagaaggtcgatgttccgggcggcaaggccgtcgtgcgccgc
ctgccgctgggcacgctgctcggcatcatgccgtggaacttcccgatctaccaggtggct
cgatttgcgggaccgaacctgatgaacggcaactgcatcatcctcaagcacgctgagatc
accccgaagtccggtgcggcctttgaggaaattctcaaggaggcgggcttgccggacggc
gtgttcatcaacgtctacgccacccacgagcaggtggagaccatcatcgccgacccgcgc
gtgcagggggtttccctcaccggctccgagcgtgctggtgcaaaggtggcggaaaccgcc
ggcaagaacctgaagaaggttgtgctcgagctcggcggcaccgacccgtacgtcatcctg
gactcctcggacatcaaggccgcggcgcaggatgcttgggcgaagcgagtgcagaacgcg
ggccaggtgtgcacctccaacaagcgcatcattgtgatggaggacatctacgacgagttt
gttgacgagatggtggccattgccgattcctttaagaagggcgatccgtccaacccgggc
gagaatgagtactacccgatgtcctcccgccgcgcggcagagctgctggatgaccaggtc
aagcgcgctgtagagaagggtgcgaagctacgcactggcggtgtgttggaggacaactcg
gcctactactccccggcggtgctgaccgatcttccggtcggctccgacgagtactatgag
gagttcttcggcccggttgccgagatttacaaggtatcttccgaggaagaggccgtcgag
ctggcaaacaactcttaccagggcctcggcggcgcggtcttctccgatgacacggaacgt
gccatcaaggttgcggaccagatcgacaccggcatgatccacgtcaacctcggccagtac
ttctctgcagtcctgccgttcggcggcgtgaagcgctccggcttcggccgcgagctgtcc
gtgttcgcgctcgacgagttcgtgaacaagcagtatctctacgtcaacgactaa
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