Corynebacterium afermentans subsp. lipophilum: CAFEL_05105
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Entry
CAFEL_05105 CDS
T09361
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00362
Benzoate degradation
cafe01100
Metabolic pathways
cafe01120
Microbial metabolism in diverse environments
cafe01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CAFEL_05105 (pcaB)
Enzymes [BR:
cafe01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
CAFEL_05105 (pcaB)
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Motif
Pfam:
Lyase_1
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
WJY58794
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Position
1064824..1066200
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AA seq
458 aa
AA seq
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MQEACTVPFSMFDNPITSSGYITPAMAEAWSVRASVRAWYEVEAALAAAEADAGMIPREA
AEAIGAAVEPSDEVIAAISAGASGNPFTRGLDALRGSLPEHASRWVHYGATTQDIMDTAR
ALQIRESLGLVQDELGELERALVHGAHEQAGTVMVARTNGQFALPTTLGYRYARWAESVR
RSRRRLDETTPRATVAQFSGAAGTYASMGERGSQVARGVAAELGLPFAEVAWHAERDTIT
ELCATLAIAGQTLAKIAEDLFDMQRSDFAEAAEEMDVHFSGSSTMPQKRNPFDTMKISVA
ARVAAGSAATVLTQPPSSLERDHRALEVDRDAVPRIFAAVHGAAAKLVHLLAALRFDTER
LYANAAAEGVLTVTEGIMMAFAPRIGHGRAHDVVQEFATEHRRSGVGLEEFVANYGPFGG
DGAMGQETLAEQLAGIDLEAIQRPESYTGQAERIAREI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggcctgcactgtgccgtttagcatgttcgataatccaattaccagcagcggg
tacatcacccccgcgatggccgaggcctggtcggtccgcgccagcgtccgcgcctggtac
gaggtggaggcggcgctggccgcagccgaggccgacgcgggcatgatcccccgcgaggcc
gcggaggcgatcggcgccgccgtcgagccgagcgacgaggtcatcgccgcgatcagcgcg
ggcgcctcgggcaacccgttcacccgcggcctcgacgcgctgcgcggcagcctgcccgag
cacgcgagccgctgggtgcactacggcgccacgacccaggacatcatggacaccgcgcgt
gccctgcagatccgcgagagcctcgggctggtgcaggatgagctcggggagcttgagcgc
gccctcgtccacggcgcgcatgagcaggccggcaccgtgatggtggcgcgtaccaacggg
cagttcgcgctgcccaccacactgggctaccgctacgcgcgctgggccgagagcgtgcgt
cgctcccgccggcggctcgacgagaccacgccgcgggcaaccgtcgcccagttctccggc
gccgctggcacctacgcctcgatgggcgagcggggctcgcaggtcgcccgtggagtggcg
gcggagctcggcctgccgttcgcagaggtggcgtggcacgcggagcgcgacaccatcacc
gagctgtgcgccaccctggcgatcgcgggtcagacgctggccaagatcgcggaggacctc
ttcgacatgcagcgttccgacttcgccgaggcggcggaggagatggacgtgcacttctcg
gggtcatcgacaatgccgcagaagcgcaacccgttcgacacgatgaagatctccgtcgcg
gcacgcgtggccgccggcagcgccgccaccgtgctcacccagccgccgagctcgctcgag
cgtgatcaccgtgccctcgaggtcgaccgcgacgctgtgccgcggatcttcgcggcggtg
cacggtgccgcagcgaagctggtgcacctgctcgccgccctgcgcttcgacaccgaacgg
ctctacgccaacgcggcggcggagggcgtgctcaccgtgaccgaggggatcatgatggcg
ttcgcgccgcggatcgggcacgggcgcgcgcacgacgtggtgcaggagtttgccaccgag
caccgccgcagcggcgtcggactcgaggagttcgtggcgaactacggcccgttcggcggc
gacggcgccatgggacaggagacgttggccgagcagctcgcgggcatcgacctcgaggcg
atccagcgccccgagtcgtataccggccaggccgagcggatcgcgcgcgagatctag
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