Corynebacterium afermentans subsp. lipophilum: CAFEL_07615
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Entry
CAFEL_07615 CDS
T09361
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00260
Glycine, serine and threonine metabolism
cafe00630
Glyoxylate and dicarboxylate metabolism
cafe00785
Lipoic acid metabolism
cafe01100
Metabolic pathways
cafe01110
Biosynthesis of secondary metabolites
cafe01200
Carbon metabolism
Module
cafe_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CAFEL_07615 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CAFEL_07615 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CAFEL_07615 (gcvP)
Enzymes [BR:
cafe01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
CAFEL_07615 (gcvP)
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Gene cluster
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WJY59282
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Position
1604324..1607137
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AA seq
937 aa
AA seq
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MDYISRHIGPDPAEQQKMLDTLGYDSIDALITAAVPSGILADKPLDLPEALTEYEAQDRL
RELADKNTVLRAFYGQGFSSTLTPPVIRRGVVEDAGWYTAYTPYQAEISQGRLEALLNFQ
TMVQDLTGLDIANASLLDEASAAAEAVGLMSRVVKKGRRVLLDSRLHPQVIKVASERARA
IDLEVEVANLAEGVVGEDLVGAVFAYPGTEGDIVDPRPVIEAIHERGGLVAVDADILALT
LLESPGEFGADIAIGTTQRFGVPLFYGGPHAAYMAVREKLQRQMPGRLVGVSKDTEGYPA
YRLALQTREQHIRRERATSNICTAQALLAVTASMYAVYHGPEGLKDIAHAVHQRAADFAA
SLEAAGVTVKHAEFFDTVAVEVAGAPEVVAKLADAGYLVRAIDETTVGVSFGEDTTDADV
EALLAGFGASVAEGAARIPAALERTTEFLTHETFNRIHSETQMMRYIRTLGDKDLALDRT
MIPLGSCTMKLNPTAGLEAITWPGFANVHPYTPDEYTEGWRELIDEIRAWLVAITGYAEV
SVQPNSGATGELAGLLAIRAYHVANGDAERDICLIPASAHGTNAASATLANLRVVVVKTA
DDGSIDLADLDAKLEKHADSVAAIMLTYPSTHGVYEEDVRVVCDKVHAAGGQVYIDGANM
NALTGIARPGDFGGDVSHLNLHKTFTIPHGGGGPGVGPIGVGEHLIPFLPGDPTAADGEG
GVPVTSTLYGSAGVLPISWSYIAMSGAAGLRSATEHAVLGANYIARELNDSYPVLYTGND
GLVGHECILDLRELTDASGVTAADVAKRLIDYGFHAPTLAFPVAGTLMVEPTESEDVAEL
DRFVEAMRAIRAEIQEIIDGEVEYENSVVHNAPYTAESVIRSEWPYEFTREKAAYPVDSL
VHAKYFPPVRRIDEAFGDRNFQCSCPPPEAFDTETES
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
ttggattacatctcccgtcatatcggcccagacccggcagaacagcagaaaatgctggat
acgctgggctacgattccatcgatgcgctgatcaccgcggcggtgccctccggcatcctg
gcggacaagccgctcgacctgccggaggcgttgacggaatacgaggcccaggaccgcctg
cgcgaactcgctgacaagaacactgtgctgcgcgcgttttacggtcaggggttctcctcc
accctgaccccgcccgtgatccgccgcggcgtggtggaggacgccggctggtacacggcc
tacacgccgtaccaggccgagatttcgcagggccgcctcgaggcgctgctgaacttccag
accatggtgcaagatctcaccggtctggacatcgcgaacgcatcgcttctcgacgaagca
tccgccgccgccgaggcagtcgggctgatgtcccgcgtggtgaagaagggccgccgggta
cttctggattcgcgtctgcacccgcaggtgatcaaggtcgcctccgagcgtgcccgcgcg
atcgacctggaggtcgaggtggccaacctggctgagggcgtggtcggcgaggacctcgtc
ggtgcagttttcgcctacccgggcaccgagggcgacatcgtggacccgcgcccggtgatt
gaggcgatccacgagcgcggcggcctggtcgccgtcgacgccgacatcctggctctgacg
cttcttgagtcccccggcgagttcggcgcggacatcgcaatcggcaccacccagcgcttc
ggcgtgccgctgttctacggcggcccgcacgcggcctacatggcggtgcgcgagaagctg
cagcgccagatgccgggccgcctggtgggcgtgtccaaggacaccgagggctacccggcc
taccgcctggccctgcagacccgcgagcagcacatccgccgcgagcgcgccacctccaac
atctgcaccgcccaggcgcttttggcggtgaccgcatccatgtacgccgtctaccacggc
cctgaaggcttgaaggacatcgcgcacgccgtgcaccagcgcgccgcggacttcgcggcg
tcgcttgaggccgccggcgtaacagtcaagcacgccgagttcttcgacacggtggcggtt
gaggttgcgggggcaccggaggtcgtcgcaaagctggcggatgctgggtacctggtccgc
gcaatcgacgagaccaccgtcggcgtgtccttcggcgaggacaccaccgacgccgacgtc
gaggcgctgctggcgggcttcggcgcttccgtcgccgagggcgccgctcgcatcccggcg
gcgctcgagcgcaccaccgagttcctcacccacgagacgttcaaccgcatccactccgag
acgcagatgatgcgctacatccgcacgctcggcgacaaggacctcgcgctggaccgcacg
atgatcccgctgggctcgtgcaccatgaaactcaaccccaccgccggcctggaggcgatc
acctggccggggttcgccaacgtgcacccctacacccccgacgagtacaccgaaggctgg
cgcgagcttatcgacgaaatccgcgcctggctggtggcaatcaccggctacgccgaggtg
tcagtgcagccgaactccggcgcgaccggcgagctggccggcctgctggccatccgcgcg
taccacgtggccaacggcgacgccgagcgcgacatctgcctcattccggcctccgcgcac
ggcacgaacgcggcgtcggcgacgctggcgaacctgcgcgtcgtggtggtgaaaaccgcg
gacgacggctccatcgacctggcggacctggacgcgaagctggaaaagcacgccgactcc
gtggccgcgatcatgctcacctacccctccacccacggcgtctacgaggaagacgtgcgc
gtggtttgcgacaaggtgcacgcggccggcgggcaggtctacatcgacggcgcgaacatg
aacgctttgaccggcatcgcccgcccgggcgacttcggcggcgacgtcagccacctgaat
ctgcacaaaacgttcaccatcccgcacggcggcggcggcccaggcgtgggcccgatcggc
gtgggcgagcacctgatcccgttcctgcccggcgacccgaccgcagctgacggcgagggc
ggcgtgccggtgacctccaccctgtacggctccgctggtgtgctgccgatttcctggtcg
tacatcgccatgtccggtgccgcgggactgcgcagcgccaccgagcacgccgttttgggc
gcgaactacatcgcgcgcgagctgaacgattcttacccagtgctctacaccggcaacgac
ggcctggtcggccacgagtgcatcctggacctgcgcgaactcactgacgcctccggggtc
accgcagcggatgtggccaagcgcctgatcgactacggcttccacgcacccaccctcgcc
ttcccggtcgccggcacgctgatggtggagccgaccgagtccgaggatgtagccgagctg
gaccgcttcgtcgaggcgatgcgcgccatccgtgcggagatccaggagatcatcgacggc
gaagtagagtacgaaaactccgtcgtgcacaacgcgccctacaccgccgagagcgtgatc
cgctccgagtggccgtacgagttcacccgcgagaaggccgcctacccggtggattcgctg
gtgcacgcgaagtacttcccgccggtgcggcgtatcgacgaagccttcggcgaccgcaac
ttccaatgctcctgcccgccgccggaagccttcgacaccgaaaccgaatcctaa
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