Clostridium autoethanogenum: CAETHG_3409
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Entry
CAETHG_3409 CDS
T02883
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cah
Clostridium autoethanogenum
Brite
KEGG Orthology (KO) [BR:
cah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cah03009
]
CAETHG_3409 (rimO)
Enzymes [BR:
cah01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CAETHG_3409 (rimO)
Ribosome biogenesis [BR:
cah03009
]
Prokaryotic type
ribosomal protein modification factors
CAETHG_3409 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
AGY77612
LinkDB
All DBs
Position
3661107..3662429
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AA seq
440 aa
AA seq
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MDKLRVGLISLGCDKNRLDSEVMLSNLNQEYSLVHDPKLADVIIINTCGFIESAKQESID
TILEMSQYKEKFNCKLIVVTGCLAQRYGKELMELLPEIDIMLGVNDYDKLNETIRKCIET
DNSRIYNCDYSDSNINEGKRILTTSTYTAYLRIAEGCDNHCTYCIIPKIRGKYRSRTIEN
IINECNDLANQGVKEIILIAQDTTRYGIDIYGKKMLPELIQKISKINEIEWIRLLYCYPE
ELTDEIINEISMNDKVCKYIDIPIQHISDSILKLMGRRGRKLDIIENIDKLRARAKGIAI
RTTIIVGFPGETEENFEELKDFVSTMKFDNLGVFKYSREEGTAAAEMKNQVPEEIKSARE
GELMVLQKQVMTSINKSKIGSTYKVIVEGKKGELWYGRSYEMAPDIDGVIYIKCKKTLKI
GTMVNVKITHSLEYDLVGVV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtggataaactaagagttggactaataagtttaggctgtgacaaaaatagattggattct
gaagtaatgttaagtaatttaaatcaagaatacagtttagttcatgatcctaaattagcg
gatgtaataattataaatacatgtggatttatagaatcagctaaacaggaatccatagat
acaatacttgaaatgtcacagtataaagaaaaatttaattgcaaattaattgtagtaaca
ggatgcctggctcagaggtatggtaaggaacttatggagttattgccagaaatagatata
atgcttggagtaaatgattatgataagttaaatgaaactataaggaaatgtattgaaact
gacaacagtaggatttataattgtgattacagtgattctaatataaatgaaggaaaaaga
atacttactacttcaacatatactgcttatttgagaattgcagagggatgtgacaatcac
tgtacctactgtataattcctaaaattaggggaaagtatagaagtagaaccattgaaaac
ataataaatgaatgtaatgatttagctaatcaaggtgttaaggagataatacttattgca
caggatactacaagatatggaatagacatatatggtaaaaaaatgcttcctgaactcatt
caaaaaatatctaaaattaatgaaatagagtggataaggcttttgtattgctatcctgaa
gagttaacagatgaaatcataaatgaaatttcaatgaatgataaagtatgtaagtatata
gatatacctattcagcacataagtgattccatactgaagcttatgggaagaagaggaaga
aaattagacataatagaaaatatagataagcttagagctagagcaaaaggtattgcaatt
aggactacaataatagttggctttcctggagagacagaagaaaattttgaagaactaaag
gactttgtaagtactatgaaatttgataacttaggtgtatttaagtattccagagaggaa
ggaactgcagctgcagaaatgaaaaatcaggttcccgaggagattaagtctgcaagggaa
ggagaacttatggtacttcaaaagcaggtaatgacttccataaataaaagtaaaattggc
agcacttacaaagtaattgtggagggaaaaaagggagaactgtggtacggaagaagttat
gaaatggctccagatatagacggagttatatatataaagtgtaaaaaaactttaaaaata
ggtactatggttaacgtaaaaattactcatagccttgaatatgatttagtaggagttgta
tga
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