Candidatus Contubernalis alkalaceticus: HUE98_06985
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Entry
HUE98_06985 CDS
T07972
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
calk
Candidatus Contubernalis alkalaceticus
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
calk03009
]
HUE98_06985 (rimO)
Enzymes [BR:
calk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HUE98_06985 (rimO)
Ribosome biogenesis [BR:
calk03009
]
Prokaryotic type
ribosomal protein modification factors
HUE98_06985 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Apidaecin
Motif
Other DBs
NCBI-ProteinID:
UNC91863
LinkDB
All DBs
Position
1425699..1427045
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AA seq
448 aa
AA seq
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MTAKKVGVISLGCAKNLVDTEVMLGLLMKAGYEITAEASSAHILIVNTCGFIGDAKEESI
NTLLEMAEYKNKGNCSILLAAGCLSQRYGEELLKEIPELDGVVGTGCFDRLPEILAESLE
GNRPVYIEQPRFLYDHTFPRVVSTSPHMAYVKIAEGCNHRCSFCIIPKLRGKYRSREPRS
VVQEVEVLAWQGVKELNLIAQDTTGYGRDLGPGRANLPALLRELAQIQGINWIRVLYGYP
GGISGDLIQIMSQEDKICNYLDIPLQHAHGEILKRMRRPFRKTKVQEQMEQLRLKIPGIT
LRSSFIVGFPGETEEHFEVLYSFLEEVRFDRVGIFRYSLEEGTTAALMGRQVSEEVKAER
YQRLMELQKNISLQKNRELLSSTLEVLMEGKVPKVKNLYVGRYRGQAPEVDGVVYVKSTS
PLKAGEIVQVKISSVVAYDLQGNNVNND
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaaaaaagtaggggttatttccctgggatgtgctaaaaatttagttgataca
gaggttatgttgggacttttaatgaaggcggggtatgagattacagctgaagcttccagt
gctcacatattgattgtaaacacctgtggttttatcggtgatgccaaagaggagtctata
aataccctgttggagatggcggagtataaaaataaggggaactgcagtatactgctggcg
gcaggttgtctttcccagagatatggtgaggaacttttaaaagagataccggaactggac
ggggtggtagggacgggatgttttgaccggttgcctgagattctggctgagtctttagag
ggaaataggcctgtatacattgagcagcccaggttcctttatgatcacactttccccagg
gttgtaagcacttctccccatatggcctatgtgaaaattgccgaagggtgcaatcaccgc
tgctctttttgtattattcctaagcttaggggcaaataccgcagtcgggaacctcggtct
gtggtgcaggaggtggaggtcttggcctggcagggggttaaggaactaaaccttattgcc
caggataccaccggatatggaagggacttagggccgggaagggctaatcttcctgccctt
ctgagagagttggcccagattcagggaattaattggataagagttttgtatggatatcct
gggggaatatccggagatcttattcagataatgtctcaggaggataagatttgcaattac
ctggacattccacttcagcatgcccatggggaaatattaaaaagaatgcgtcgacctttc
cgtaaaacaaaggttcaagaacagatggaacagttgaggttaaaaattcctggaattaca
ctgaggagttcttttattgtgggatttcccggagaaacagaggagcattttgaggtgctg
tactcctttttagaggaagtaagatttgatcgagtaggtatctttcgttactccttggaa
gaaggtacaacggcggctctgatgggccggcaggtttcggaggaggttaaggcagaaagg
tatcagaggcttatggaattgcagaaaaacatatctctgcaaaaaaatcgggaactttta
agttctactttggaggttctcatggagggaaaggtcccaaaggtaaagaatctgtatgta
ggtcggtatagggggcaggcacctgaggtggacggagtggtgtatgtaaaaagcacttcg
ccattgaaggcgggagagatagttcaggtaaaaatatcatcagttgttgcttatgacctt
cagggaaacaatgtgaataatgattga
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