Calothrix sp. NIES-2098: NIES2098_17920
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Entry
NIES2098_17920 CDS
T08374
Name
(GenBank) FAD dependent oxidoreductase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln00906
Carotenoid biosynthesis
caln01100
Metabolic pathways
caln01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
NIES2098_17920
Enzymes [BR:
caln01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
NIES2098_17920
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
HI0933_like
Pyr_redox_2
FAD_oxidored
GIDA
Thi4
GDI
FAD_binding_3
Pyr_redox
Chordopox_E11
GMC_oxred_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BAY08632
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Position
2147159..2148661
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AA seq
500 aa
AA seq
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MASSSLFDVIVIGSGIGGLVTATQLAAKGAKVLVLESYLIPGGSAGYFERQGYRFDVGAS
MIFGMGQNGTTNLLTRALDAVNVSLETIADPVQIHYHLPDNLDLKVDRVYDKFLQNLTAY
FPHERKGIRRFYDECWRVFNCLNSMDLLSLEEPRYLLRVFFQRPLACLGLVKYLPQNVGD
VARRYIKDPQLLKFIDIECYCWSVVTANMTPMINAGMVFSDRHYGGVNYPKGGVGKIAQT
LAAGLEKAGGKIQYQARVTKIITERGKAVGVKLANGQVYRGKRIVSNATRWDTFEKLLPV
ESMPRNEKKWQQTYKKSPSFLSLHMGVKKSVLPQGTECHHILLEDWQQMTAPQGTIFVSI
PTLLDPDLAPAGYHIIHAFTPDWIDNWQGMNESEYEAHKEAAAWRIIDRLEQIFPGLDAG
LDYLEVGTPRTHRRFLGREDGTYGPIPRRKLRGLLGMPFNRTAIPGLYCVGDSTFPGQGL
NAVAFSGFACAHRIAVDLGL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcttctagttccttatttgatgtaattgtcattggctctgggattggtggattggtg
acagcaacccaactagcagcaaaaggagctaaagtactggtactagaaagttatttaata
ccaggtgggagtgcgggttactttgaacgtcagggctatcgctttgatgtgggggcttca
atgatttttggcatggggcaaaatggaacgacaaatttacttacccgcgccctggatgcg
gtgaatgtcagcctcgaaacaattgccgatccggtacagattcactaccatcttcctgat
aatttagacttaaaagtggatcgggtttatgacaaatttttgcaaaatcttactgcttat
tttccccacgaacgaaaagggattcgtcgtttttatgacgaatgctggcgagtttttaat
tgtctgaacagcatggatttgctgtcgctcgaagaacctaggtatttactgcgggtattt
tttcagcgtcctttagcttgtcttgggttagtcaaatatttaccgcaaaatgttggggat
gtggcgcgacgctatatcaaagatccccaattgttgaagtttattgatatagagtgctat
tgctggtcggtagtgaccgctaacatgacaccaatgattaatgctggcatggttttttct
gacagacactatggtggagttaattaccctaaaggcggggtaggaaaaattgctcaaaca
ttggcagcaggtttagaaaaggctggcggtaaaattcagtatcaagccagagtgacgaaa
atcatcaccgaacgcggaaaagctgtaggcgtgaaactcgctaatggtcaagtctatcgg
ggtaaacgcatagtttctaacgctacacgctgggatacttttgaaaaattattacctgta
gagtctatgccacgtaatgagaaaaagtggcaacaaacttataaaaaatcacccagcttt
ttgagtttgcacatgggggtgaaaaaatcagttttgcctcagggtacagagtgccatcat
atattgctggaagactggcagcaaatgactgcaccacaaggcacaatttttgtgtcaatt
cccactttgcttgaccctgatttagctccagcaggatatcacatcattcatgcttttaca
cccgattggatagataattggcagggaatgaacgaaagtgagtatgaagctcacaaagaa
gcagccgcatggcgaattattgacagattagagcagattttcccaggtttggatgcagga
ttggattatttggaggtaggaacaccccgcacccatcgtcgctttttgggaagagaagat
gggacttacgggccaattccccgacgtaaattgcgggggttgttgggaatgccatttaat
cgcacggcaatacccggattgtactgtgtaggggatagtacctttcccggtcagggatta
aatgcggtggcattttctggcttcgcctgtgcccatagaattgccgtagatttgggcttg
tga
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