Calothrix sp. NIES-2098: NIES2098_53840
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Entry
NIES2098_53840 CDS
T08374
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caln03009
]
NIES2098_53840
Enzymes [BR:
caln01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NIES2098_53840
Ribosome biogenesis [BR:
caln03009
]
Prokaryotic type
ribosomal protein modification factors
NIES2098_53840
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
AHD
Motif
Other DBs
NCBI-ProteinID:
BAY12197
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Position
6493574..6495022
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AA seq
482 aa
AA seq
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MRTATGNATLPLEYCPRMGADKTEPIQRCLCLKKRKNGKFWQNMGDKPTIAISHLGCEKN
RIDTEHMLGLLVKAGYGVDSNEELADYVIVNTCSFIEAAREESVKTLVELAEANKKIVIA
GCMAQHFQEQLLAELPEAVAVVGTGDYHKIVNVIERVEQGERVKQVSIEPTYIADETTPR
YRTTTEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVTEAKQLATQGVQEIILIS
QITTNYGLDIYGKPKLGELLRALGEVDVPWIRMHYAYPTGLTDDVIAAIQEIPNVLPYLD
LPLQHSHPEILRAMNRPWQGRVNDGIIERIKMALPSAVLRTTFIVGFPGETDEHFEHLLQ
FVRRHEFDHVGAFTFSPEEETPAYKLPNQLPQELMDERRNRLMELQQPIAWQKNQQEVGK
IVDVLIEQENPETGELIGRSARFAPEIDGQVYVAGKAKLGTIVPVEIQSADTYDLYGQIV
NN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttgcggacagcgacgggcaatgctactcttccacttgagtactgtccgcgtatgggtgca
gataaaacagagccaattcagcgctgtttgtgtttgaagaaaagaaaaaacggaaaattt
tggcaaaatatgggtgacaagccaacgattgcaatttctcacctgggctgcgagaaaaac
cgaattgatacagagcatatgctaggactgcttgtaaaagcaggctatggcgtagatagt
aatgaagagttagcagattacgttattgtcaatacctgtagttttattgaagcagccaga
gaagaatctgttaaaactttggtagagttggcagaggctaataaaaaaatcgtgatcgct
ggctgtatggcgcagcacttccaagagcaattattggcagagttgcccgaagcagtggcc
gtagtaggtacaggtgattatcacaaaattgtaaatgtaattgagcgggtagaacaagga
gaacgggtcaagcaggttagtattgaaccaacctatattgccgatgaaactacaccgcgc
taccgcactacaaccgaaggcgtagcttatctgcgggtggccgaaggatgtgattatcgt
tgtgcgttttgtattattcctcatctgcgaggaaaccagcgatcgcgtactattgaatcg
attgtcactgaagccaagcagttagcaactcaaggggtacaagaaattattctgatttcc
caaatcaccactaattatggtttggatatttacggtaagccaaagctaggcgaattactc
cgcgctttgggagaagtagatgtaccgtggatcaggatgcactacgcttatcccaccgga
ctgacagatgatgtgatagcagctattcaagaaatacccaatgtccttccctatttagat
ttgcctttacaacattctcatccggaaattctccgcgccatgaaccgtccctggcaagga
cgggtaaatgatggaattattgagcgcatcaagatggcgctaccatcggcggtgctgaga
acaacatttattgttggttttcctggagagaccgatgagcattttgaacatctactacag
tttgttcggcggcacgaattcgatcatgtgggcgcgttcaccttttccccggaagaggaa
actccagcctacaagttaccaaatcagttgcctcaagaattaatggatgagcgccggaac
cgcctcatggaactccaacaaccaattgcttggcaaaaaaatcaacaggaagtcggcaaa
attgttgatgtcctgatcgagcaagaaaatcctgaaactggagaattaattggtcgttcg
gcgagatttgccccagaaattgatgggcaggtctatgtggctggcaaggcaaaattagga
acaatcgtgccagtagaaatccaaagtgctgatacgtatgacctctacggtcaaattgtc
aataactaa
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