Citrobacter amalonaticus Y19: F384_00965
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Entry
F384_00965 CDS
T03934
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
cama
Citrobacter amalonaticus Y19
Pathway
cama00310
Lysine degradation
cama01100
Metabolic pathways
cama01110
Biosynthesis of secondary metabolites
cama01120
Microbial metabolism in diverse environments
Module
cama_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
F384_00965
Enzymes [BR:
cama01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
F384_00965
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AKE57817
UniProt:
A0A0F6TSU6
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Position
221160..223298
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AA seq
712 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELERALQSLGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSEINQLNEYLPLYAFINTHSTMDVSVHDMRMALWFFEYALGQAEDIATRIRQY
TNEYLDNITPPFTRALFTYVKEGKYTFCTPGHMAGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPTGSTLLI
DRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGIPKREFTRESIASKVAATAQAQWPVH
AVITNSTYDGLLYNTNWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIF
ETQSTHKMLAALSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASIETAAAMLRGNS
GRRLINRSVERALHFRKEVQRLREESDGWFFDIWQPEEVDEAECWPVAPGEDWHGFTDAD
DDHMFLDPVKVTILTPGMDEQGKMSDEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRSYDLNLRVKNMLPDLYAEDPDFYRNMRIQELAQGIHKLIRQH
DLSGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETVTLDQLVGRVSANMILPYPPGVPLLM
PGEMITGQSRAVLDFLLMLCSVGHHYPGFETDIHGAKQDEEGVYHVRVLKTA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatcgccatcatggggccgcacggggttttttataaagatgagcccatcaaa
gagcttgagcgtgcgctgcaatcactgggatttcagattatctggccgcagaacagcgtc
gacctgctgaaatttatcgaacacaacccgcgcatctgcggggtaatttttgactgggat
gagtacagtctcgatctgtgcagcgagattaaccagctcaatgaatatttaccgctgtac
gcgtttatcaacacgcattcaacgatggacgtcagcgttcatgacatgcgtatggcgtta
tggttttttgagtatgcgctggggcaggcggaagatattgcgacgcgcattcgccagtac
accaacgagtacctcgacaatatcacgccgcccttcaccagggcgctgttcacctatgtg
aaagaggggaagtacaccttctgcacgccaggacacatggccggaaccgcctatcaaaaa
agcccggttggctgcctgttctatgactttttcggcggcaataccctgaaagcggatgtg
tcgatatcggtcactgagctgggttcgttactcgaccacaccggaccgcatctggaggct
gaagagtacattgccagaactttcggcgcagagcagagttacatggtgaccaacggcacc
tccacctcaaataaaattgtggggatgtatgccgcgccgaccggcagtacgctgctgatt
gaccgcaactgccataagtcgctggcgcatttgttgatgatgagcgacgtggtccccatc
tggctgaaaccgacgcgtaacgcgctcggcattctgggcggcattcctaagcgcgagttc
acgcgcgagagtattgcgagcaaggttgccgccacggcgcaggcgcagtggccggttcac
gcggtgatcaccaactcaacctatgacggtctgttgtataacaccaactggatcaagcag
acgctggatgtcccctctatccacttcgattctgcctgggtgccgtatacccactttcac
cccatttatcaggggaaaagcggaatgagcggtgaacgggtgcctggtaaggtgattttc
gaaacgcaatccacccacaaaatgctggcggcgttatcgcaggcgtcgctgattcatatt
aaaggggaatatgacgaagagaccttcaacgaagcctttatgatgcacacgtccacttcg
ccgagctatcccattgtcgcctccatcgaaacggcggcggcgatgctgcggggaaattcc
ggcaggcggttaatcaaccgctcggtggaacgcgcgctgcattttcgcaaagaggtgcag
cggttgcgtgaggagtctgacggttggttcttcgatatctggcagccggaagaggttgat
gaagcggagtgctggccggttgcgcctggtgaagactggcacggatttaccgatgccgac
gacgaccatatgtttctcgacccggtaaaagtgacgatcctgactcccggtatggatgag
caagggaagatgagtgacgaagggatccccgctgcgctggtggcaaaattcctcgatgag
cgcggcgtggtggtggagaaaaccggcccgtataacctgctgtttctctttagtatcggt
attgataaaacccgggcgatggggctgttgcgtggcctgactgaatttaaacgctcctac
gatctcaatttgcgcgtgaagaatatgctgccggatctgtatgcggaagatcctgatttt
tatcgcaacatgcgtatccaggaactggcgcaagggatccataagctcatccgccagcac
gatctttccggactgatgctgcgagcgtttgatacgttgccggaaatgatcatgacgccg
catcaggcctggcagcggcagatcaagggcgaagtcgaaacggtgactctcgatcaactg
gtggggcgcgtgtcggcgaatatgatcctgccgtatccccccggcgtgccgctgctgatg
ccgggagaaatgatcaccgggcagagtcgcgccgtgctcgatttcctgttgatgctctgt
tctgtcggccaccactatccgggctttgaaacggatattcacggggcgaagcaggatgaa
gagggggtataccacgtacgagtcttaaaaacggcatga
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