Cobetia amphilecti: LCW13_03070
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Entry
LCW13_03070 CDS
T07922
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
camh
Cobetia amphilecti
Pathway
camh00071
Fatty acid degradation
camh00280
Valine, leucine and isoleucine degradation
camh00310
Lysine degradation
camh00362
Benzoate degradation
camh00380
Tryptophan metabolism
camh00410
beta-Alanine metabolism
camh00640
Propanoate metabolism
camh00650
Butanoate metabolism
camh00907
Pinene, camphor and geraniol degradation
camh00930
Caprolactam degradation
camh01100
Metabolic pathways
camh01110
Biosynthesis of secondary metabolites
camh01120
Microbial metabolism in diverse environments
camh01200
Carbon metabolism
camh01212
Fatty acid metabolism
Module
camh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LCW13_03070 (fadB)
00650 Butanoate metabolism
LCW13_03070 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LCW13_03070 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LCW13_03070 (fadB)
00310 Lysine degradation
LCW13_03070 (fadB)
00380 Tryptophan metabolism
LCW13_03070 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LCW13_03070 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LCW13_03070 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LCW13_03070 (fadB)
00930 Caprolactam degradation
LCW13_03070 (fadB)
Enzymes [BR:
camh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LCW13_03070 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LCW13_03070 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LCW13_03070 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LCW13_03070 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Arm-DNA-bind_1
Motif
Other DBs
NCBI-ProteinID:
UBU49265
LinkDB
All DBs
Position
726366..728516
Genome browser
AA seq
716 aa
AA seq
DB search
MIYSGKTLTVEANQDAIALLTLDLEGESVNKLASYVLKELGEAVEAIKATADLKGLVIRS
AKEAFVVGADITEFHQMFEKDEAFLIDMNMNIHGIFNAIEDLPFPTVTAINGLALGGGCE
ITLTTDFRVMADSARIGLPETKLGIIPGWAGCVRLPRLIGADNAIEWICGGTENRADKAL
AVGAVDAVLPVAELDAAALDILARANTGELDYQARRLEKTSPLKLNAIEQMMAFETAKGF
VAGKAGPHYPAPVEAIKVIQKGAGESRERAQAIEAKTFARMALTDVAFNLVGLFMNDQVV
KKKAKGYEKQASEIKQAAVLGAGIMGGGIAYQSASKGTPILMKDINGEAIELGLKEARKL
FGKGVERGKLTTEKMAQGLSNIRPTLSYGDFGNVDLVVEAVVENPKVKASVLAELEDNVA
EDAILTSNTSTISITRLAESLKRPENFCGMHFFNPVHRMPLVEVIRGEKSSDAAIAATVA
YARQMGKTPIVVNDCPGFLVNRVLFPYFGGFSLLVEKGADYQRVDKVMEKFGWPMGPAYL
LDVVGMDTAVHANAVMAEGFPDRMARDGKTAIQVMYDNKRLGQKNDLGFYRYEEDRKGKP
KKLADDEAQALVAQVVSETREFSDEDIIARMMVPLCMETIRCLEDDIVGSPAEADMALIY
GIGFPPFRGGALRYVDAMGVAEFVALADSLADELGPLYRPTEALRERAKRGEAFYS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctattcaggcaaaacgctaaccgtcgaggccaatcaggacgccatcgccctgttg
accctcgatcttgaaggcgaatcggtcaacaagctggccagctacgtactcaaggagctg
ggagaggcggtcgaggccatcaaggcgacggccgatctcaaggggctggtcatccgctcc
gccaaggaagcgttcgtggtcggtgccgacatcaccgagttccatcagatgttcgagaag
gatgaagccttcctcatcgacatgaacatgaacatccatggcatcttcaatgccatcgag
gatctgccgttccccaccgtcactgccatcaatgggctggcgctgggcggcggctgcgag
atcaccctgaccaccgatttccgggtcatggccgacagcgccaggatcggcctgccggaa
accaagctcggcatcatcccgggctgggcgggctgtgtacgactgccgcgtctgatcggg
gcggacaacgccatcgagtggatctgtggtggcaccgagaaccgtgccgacaaggcgctg
gcagtgggcgccgtcgatgccgtcctgccggtggccgagctggatgcggcggcactcgac
attctggcgcgtgccaataccggcgagctggactatcaggcgcgtcgtctcgagaagacc
tcgccgctcaagctcaatgccatcgagcagatgatggccttcgagaccgccaagggcttc
gtggccggcaaggccggtccgcactatccggcgccggtggaggccatcaaagtcatccag
aagggcgcgggggaatcgcgtgagcgtgcccaggccatcgaggccaagaccttcgccagg
atggcgctgaccgacgtggccttcaatctggtcggcctgttcatgaacgatcaggtggtc
aagaagaaggccaagggttacgagaagcaggccagcgagatcaagcaggccgccgtgctg
ggggccggcatcatgggcggcggcatcgcctatcagagcgccagcaagggcacgccgatc
ctgatgaaggacatcaacggcgaggctatcgaactgggcctgaaggaggctcgcaagctg
ttcggcaagggggtcgagcgcggcaagctgaccaccgagaagatggcgcagggcctgtcc
aacatccgcccgacgctgtcctacggtgacttcggcaatgtggacctggtcgtcgaggcg
gtggtcgagaatcccaaggtcaaggcctcggtgctggccgagctcgaggacaacgtcgcc
gaggacgccatcctgacctccaacacctcgaccatctccatcacgcggctggccgagtcg
ctcaagcgtcccgagaacttctgcggcatgcacttcttcaacccggtgcaccgcatgccg
ctggtcgaggtcatccgtggcgagaaatccagcgatgcggccatcgccgcgaccgtcgcc
tatgcccgccagatgggcaagacgccgatcgtcgtcaacgactgcccgggctttctggtc
aaccgcgtgctgttcccctacttcggtggcttcagcctgctggtcgagaagggcgccgac
tatcagcgcgtcgacaaggtgatggagaagttcggctggccgatgggtccggcctacctg
ctggatgtggtcggcatggataccgcggtgcacgccaatgccgtgatggcggaaggcttc
ccggaccgcatggcgcgtgacggcaagaccgccatccaggtgatgtacgacaacaagcgc
ctcggccagaagaacgatctgggcttctaccgctacgaggaagaccgcaagggcaagccg
aagaagctggcagatgatgaggctcaggcgctggtggcacaggtcgtcagcgagacgcgc
gaattctccgatgaagacatcatcgcgcgcatgatggtgccgctgtgcatggaaaccatc
cgctgcctggaagacgacatcgtcggcagcccggccgaggccgacatggccttgatctac
ggcatcggcttcccgccgttccgtggtggcgcactgcgctatgtcgacgccatgggcgtg
gccgagttcgtcgcactggccgacagcctggccgatgagctggggccgctgtatcgcccg
accgaggcgctgcgcgagcgcgccaagcgtggcgaagccttctactcctga
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