Capsicum annuum (peppers): 107843734
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Entry
107843734 CDS
T04646
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03030
DNA replication
cann03410
Base excision repair
cann03420
Nucleotide excision repair
cann03430
Mismatch repair
cann03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107843734
03410 Base excision repair
107843734
03420 Nucleotide excision repair
107843734
03430 Mismatch repair
107843734
03440 Homologous recombination
107843734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cann03032
]
107843734
03400 DNA repair and recombination proteins [BR:
cann03400
]
107843734
Enzymes [BR:
cann01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107843734
DNA replication proteins [BR:
cann03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
107843734
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
107843734
MMR (mismatch excision repair)
DNA polymerase delta complex
107843734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
107843734
NCBI-ProteinID:
XP_016543594
LinkDB
All DBs
Position
10:complement(215780830..215807994)
Genome browser
AA seq
1089 aa
AA seq
DB search
MNNGKSRKRSAQAAEETPSPQPPQKHHAAMEEEDLDEDVFLEETLLQYEEDSAVLRELEE
SHALNERLQKWKRPPLSQAYVSHTQSISFQQLEIDYIIGDSHKELLPTSSGQAAILRIFG
VTKEGNSVCCHVHGFEPYFYISCPPGMGPDDISRFHQVLEGRMRESNRNSNVPKFIRRIE
VVQKRSIMYYQQHVSQPFLKIVVALPAMVTSCRGILDRGIQIEGLGMKSFLTYESNILFA
LRFMIDCNIVGGNWIEVPVGKYKKAAKNLSYCQLEFDCLYSDLISHSPEGEFSKMAPFRI
LSFDIECAGRKGHFPEPTQDPIIQVANLVTLQGQGQPLIRNVMTLKSCSPIVGVDVMSFD
TEKEVLLAWRNLIREVDPDIIIGYNICNFDLPYLIRRAEVLGMAEFPVLGRIRNSRVRVK
DATFSSRQHGTRESKEITIEGRVKFDLFQAVQRDYKLSSYSLNSVSAHFLNEQKEDVHHS
IISDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQS
IKVLSQLLRKAKQKNLVIPNAKQAGSEQGTFEGATVLEARTGFYEKPIATLDFASLYPSI
MMAYNLCYCTLVTPEEVRKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA
KADLKEATDPRVKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEH
TKKLVEDKFTVLGGYEHNAEVIYGDTDSVMVQFSVPTVEEAMKLGREAADYISGTFIKPI
RLEFEKIYYPYLLISKKRYAGLLWTNPDKHDKMDAKGIETVRRDNCLLVKNLVTECLYKI
LVDRDIPGAVQYVKNTIADLLLNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRD
AATAPGIGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDAQYYLDNQISKPLLRIFE
PILKNASKELLKGDHTRAISVPTPSNSGIMKFAKKQLTCIGCKIPLSGSDRTICNHCKGR
EAELYCRSVANVAELENLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA
KTQLDRWNF
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacggcaaatcacggaagcgatcggcgcaggctgcggaggagacaccgtcacct
cagccgccgcaaaaacaccacgccgcaatggaagaagaagacctagacgaagatgttttc
ctcgaagagacattgcttcagtacgaagaagattcagctgtccttcgcgaactcgaagag
agtcatgcgcttaacgagcgtcttcagaagtggaaacgtccgccgctttctcaagcttac
gtctctcatacacaaagcatatcgtttcagcagctggaaattgactacattattggagac
agccataaagaattgctgcctacttcttctggtcaggctgccattttaagaatctttggg
gtcaccaaggaaggaaatagtgtctgttgtcatgtacatggatttgaaccatacttctat
atcagctgccctcctggaatgggccctgatgatatctcccgttttcaccaagttcttgag
ggtaggatgagagagtcgaataggaacagcaatgtccctaagtttatccgccgcatcgaa
gtggttcagaaaaggagcatcatgtattaccaacagcatgtgtcacagccttttctcaag
attgtagtggcattgccagcaatggttaccagttgccgtggtattctcgatagaggtatt
caaattgaagggcttggtatgaagagctttctgacttatgaaagtaatattctttttgct
cttcgcttcatgattgactgcaatattgttggtggaaactggattgaagttccggttggg
aaatacaagaaagctgcaaagaatctctcctattgtcaattagagtttgattgtctatat
tctgacttgatcagccattctcctgaaggagaattttcgaagatggctccctttcgcata
ttgagttttgatattgaatgtgctggtcgtaaagggcactttcccgagcctacacaagac
cctattattcaagtggccaatctggttaccttacagggacagggtcagccattaattcgg
aatgtgatgacccttaagtcatgctcacctatagttggggttgatgttatgtcctttgac
acagaaaaagaagtattgctggcttggaggaaccttatccgtgaagtggaccctgatata
ataattggatataatatctgcaactttgatttgccgtatctcatcaggagagctgaagtc
ttagggatggcagaatttcctgtgcttggacgcatcagaaacagcagggttcgtgtaaaa
gatgcaaccttttcttcaagacagcatggaacaagggaaagtaaagaaataacaatcgaa
gggagagtcaaatttgatttatttcaggctgtgcagagggattataagctaagttcttac
tcactaaattctgtctcagcacattttcttaacgagcagaaagaagatgtccatcattca
attatatcagatcttcaaaatgggaactcagaaactaggaggcggcttgctgtatattgt
ctaaaggatgcttatctcccacaacggcttttggataaattaatgttcatttataactat
gtggagatggctcgagtcactggtgtacctatatcttttcttctatcaagagggcaaagc
attaaggtgctttctcaacttttaaggaaggcgaagcaaaagaatcttgtcataccaaat
gcaaaacaggctggatcggaacaaggaacatttgagggcgcaacggttttggaggcccga
actggtttttatgagaagccaattgcaacattggattttgcatctctatatccatcaatt
atgatggcatataatttatgttactgcacgctggtaactcctgaagaggttcgcaaactg
aacctccctccagagtgcgtcaacaagaccccttctggtgaaacatttgtcaagtcaaat
ttacagaagggaatacttccggaaattcttgaagagctattagctgctcgtaaaagagca
aaagcagatttaaaggaagcaacagatcctcgagtcaaagctgtcttagatggccgtcag
ctggctttgaagatcagtgcaaattctgtgtatgggtttactggagctactgttggtcaa
ttaccatgtttagaaatatcttcaagtgttactagctatggtcgacagatgattgagcac
acaaaaaagcttgtggaagacaagtttacagtacttgggggctatgaacacaatgctgag
gttatatatggagatacagattccgtgatggtgcaatttagtgtgcctactgtggaagag
gctatgaaattgggcagagaagctgctgattacattagcgggacatttatcaaaccaata
agactagaatttgagaagatttattacccatatctgttgatcagcaagaagagatatgct
ggccttttatggacaaatccggacaaacatgacaaaatggatgctaaagggattgaaact
gttcggagggataattgtctcttagtcaagaaccttgtaactgagtgtctttataaaata
ctagtagacagagatattcctggtgctgttcaatatgtcaagaatactatcgcagatctt
ctgctgaaccgcatggatctgtctcttttagttattactaagggtctgacgaaaactgga
gatgattatgaagtaaaggcagcacatgttgaacttgcagagcgaatgcgcaagcgagat
gctgctactgcacctggtattggtgatagagtaccttacgtcataattaaagctgccaaa
ggtgccaaggcatatgaaaagtcagaggaccctatatacgtgttagagaacaacatacct
atagatgctcaatactatcttgataatcaaattagtaagccacttttgaggatttttgag
ccaatactgaagaatgcaagtaaagagcttcttaagggagatcacacaagagccatctca
gttccgaccccttcgaacagtggtattatgaaatttgccaagaagcaactcacttgcatt
ggatgcaaaataccactcagtggctctgatcgaacgatctgcaatcactgcaaaggaaga
gaggccgaactttattgcagatccgtggctaatgtggctgaactagagaatctttttggg
aggctatggacacaatgccaagaatgccaaggctctctccatcaggatgttctatgtact
agtcgagactgcccaatcttttatcggaggaagaaggctcagaaagacatggctgaagct
aaaactcaattagatcggtggaacttctga
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integrated database retrieval system
