Capsicum annuum (peppers): 107847746
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Entry
107847746 CDS
T04646
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107847746
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cann01009
]
107847746
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107847746
03036 Chromosome and associated proteins [BR:
cann03036
]
107847746
Protein phosphatases and associated proteins [BR:
cann01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107847746
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107847746
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107847746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EZ
PDS5
Adaptin_N
SCD
Cnd1
CLASP_N
Motif
Other DBs
NCBI-GeneID:
107847746
NCBI-ProteinID:
XP_016547691
LinkDB
All DBs
Position
11:3404616..3413368
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDWFVPLVKRLAAGEWFTARVSACGLFHIAYSSAPEMLKAELRSIYSQLCQDDMPMVR
RSAASNLGKFAATVESAYLKSDIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGIGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LDMTTSPHYLYRMTILRAISLLAPVMGSEITCSKLLPVVVTATKDRVPNIKFNVAKVLQS
LIPIVDHSVVEKTIRPSLVELAEDPDVDVRFYANQALQSIDNVMMSG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggccatggtagatgagccattgtacccaatagcggtgttaattgatgaacttaagaat
gatgatatccaattgaggttaaattctattaggaggttatcaactattgcacgcgcactt
ggtgaggaaagaaccaggaaggagttgattccatttttgagtgaaaacaatgacgacgat
gatgaagtgttgcttgcaatggcggaagaactgggtgtttttattccttatgttggaggc
gtggagcatgctcatgttcttctcccacctctagagaccctttgtactgttgaagagacc
tgtgtgagggataaagccgtggagtcattgtgtagaattggatcccagatgagggagagt
gatttggttgattggttcgtccctcttgtgaagaggttggcagctggtgaatggttcaca
gctagagtttctgcatgtgggctctttcatattgcttactctagtgccccagagatgttg
aaggcagaacttcggtctatttacagccaattgtgtcaagacgatatgcctatggtgcga
aggtcggctgcctcaaacttggggaagtttgctgctacagttgaatctgcctacctcaag
agtgatatcatgtcaatatttgatgatcttactcaggatgatcaggattctgtgcgctta
ttagccgttgagggatgtgctgcacttgggaagctactggagccccaagattgtgtggca
catatcctgcctgtcattgtcaacttctctcaggacaagtcatggcgcgtccgatacatg
gttgctaatcagttgtacgaactatgtgaagctgtagggcctgagcccactaggacggat
ttggtgcctgcctatgtccgtttgcttcgagataatgaagctgaagttcgcatagctgct
gcagggaaagtcaccaaattctgtcggattcttagtcctgagcttgctattcagcatatt
cttccctgtgtgaaggaattatcatcagactcttcacagcatgtcagatctgctttggct
tctgttataatggggatggctcctgttttgggcaaggatgcaaccattgaacatcttctt
ccaatatttctatcccttctgaaggacgagtttcccgatgttcgcctgaacatcattagc
aagcttgatcaagtcaatcaggtgattggaattgatttactatcccaatctctgttgcca
gctattgttgagttggcagaggacaggcattggcgagtccgtcttgcaataatagaatac
attcctctattggcaagtcagttgggaataggattttttgatgataaacttggcgccctt
tgtatgcaatggttacaggacaaggtttattcaatcagagatgctgctgctaataactta
aagcgtcttgcagaagaatttggtccagagtgggcaatgcagcatattattcctcaggtc
ttggatatgactaccagtccacattatttgtaccgaatgactattcttagagcaatttca
ttgcttgcacctgtaatgggctctgagatcacttgctcaaagttgctgcctgtggttgtt
actgccactaaggatagagtgcccaacattaaatttaacgtggcaaaggtgttgcaatcc
cttatacctattgttgaccactcggtggtggagaaaaccattcgccccagtttagtagag
ctagctgaagaccctgatgtcgatgttcgcttttatgccaatcaagcacttcagtcaatc
gataatgtgatgatgtcaggctag
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