Capsicum annuum (peppers): 107847829
Help
Entry
107847829 CDS
T04646
Name
(RefSeq) sphingosine-1-phosphate lyase isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00600
Sphingolipid metabolism
cann01100
Metabolic pathways
Module
cann_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
107847829
Enzymes [BR:
cann01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
107847829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
107847829
NCBI-ProteinID:
XP_016547835
LinkDB
All DBs
Position
11:complement(90348281..90356678)
Genome browser
AA seq
539 aa
AA seq
DB search
MEFRIPAWVNQYRVSANSLLSEYDPLTLLLAPLFSLLLARILQSIFLVFHERGLKATVIS
FFMSAIKLVPGVKKYIDSEKQKIVDKLQGSSNRDGWRTELPKSGLGDKVLVQMKDEKQKD
VSWQGKCSGTVYIGGNENEGHFSLINEACCMFAHTNPLHLSVFPSVVRFEAEVVAMTAAI
LGSKEKASGGQICGNMTSGGTESILLAVKSSRDYMKAKKGITKPEMIIPVSAHSAYDKAA
QYFKIKLWRVPVDKEFRADVKAIKRHINKNTVMIVGSAPGFPHGIIDPIEKLGDLATSYQ
ICLHVDLCLGGFVLPFACKLGYPVPPFDFTVQGVTSISVDVHKYGLAPKGTSVVLYRNRE
IRKNQFVAVTEWTGGLYVSPTIAGSRPGGLIAGAWAAMISLGSEGYLENTKEIMEASKRI
QKGIHDIPELFVVGRPDMSIIAFGSDVVDIFEVNDVLSSKGWHLNALQRPNSVHICVTLQ
HVPVVQIFLKDLRDSVQTQVKENPGPVNGGFAPIYGAAGKIPDRVMVQDLLVEYIDRSC
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcggattccagcatgggtgaatcagtacagagtttcagcaaattccctttta
tctgaatatgacccattaactctactacttgctcctctcttttctcttctattggctcga
attcttcaatccatcttccttgtttttcacgaacgaggactcaaagccacggttattagc
ttctttatgagcgccatcaagttggtccctggtgttaaaaagtacattgactctgagaag
cagaagatagtggataagttgcaaggttctagtaatagagatggatggagaactgagttg
ccgaagtcaggtttaggtgataaagtcctagtgcaaatgaaagatgagaaacaaaaagat
gtgagctggcagggcaaatgttcgggtaccgtctatattggcggaaatgagaatgaggga
catttttcattgataaacgaggcatgttgcatgtttgctcataccaatcctctacatctg
agtgtattcccaagtgttgttagatttgaagcagaagtggttgcgatgacagctgcaatt
cttggtagtaaggaaaaggcttctggaggacaaatttgtggcaatatgacatcagggggg
actgaaagtatattattagcagtcaaatcatcacgtgactatatgaaagccaagaaagga
atcactaaaccagaaatgataataccagtttctgcacactcagcatatgacaaggctgca
caatatttcaagatcaagttgtggcgtgtccctgttgataaagaatttcgagcagatgtt
aaagctattaagcgacatattaacaaaaacactgtaatgattgttggatcggcacctggt
ttcccccatggcataattgatccaattgagaagcttggtgatttggctactagctaccaa
atttgtttgcatgttgacctttgtcttgggggctttgtcttaccatttgcttgtaaactg
ggttacccggtacctccatttgatttcactgttcaaggagtaacctcaatctcggtagat
gtacacaaatatgggctggccccaaaaggaacaagtgttgttctgtacagaaatcgtgaa
ataaggaagaatcaatttgttgctgtcactgagtggactggtgggctttatgtttctcca
acaattgctggaagcaggcctggaggtctgatagccggggcttgggcagcaatgatatct
ttaggctccgaagggtacttggaaaacaccaaggagatcatggaggcatcaaaaagaatt
cagaaagggatacatgacattccagaactgttcgtggttggaaggcctgatatgagcatt
attgcttttggatctgacgttgtagacatatttgaagtcaatgatgtactttcgtccaaa
ggctggcatttaaatgcattgcagagacctaatagtgttcatatttgtgtgacgcttcaa
catgtaccagtagtccagatttttctaaaggatctaagagattccgtgcagactcaggtg
aaagaaaatccaggtccagttaatggagggtttgctccaatctacggtgccgcagggaag
attccagatagagttatggttcaagatctgttggtcgaatatattgacaggtcgtgctag
DBGET
integrated database retrieval system
