KEGG   Capsicum annuum (peppers): 107853094
Entry
107853094         CDS       T04646                                 
Name
(RefSeq) nuclear-pore anchor isoform X1
  KO
K09291  nucleoprotein TPR
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107853094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cann03019]
    107853094
Messenger RNA biogenesis [BR:cann03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107853094
SSDB
Motif
Pfam: TPR_MLP1_2 ATG17_like KNOX2
Other DBs
NCBI-GeneID: 107853094
NCBI-ProteinID: XP_016553591
LinkDB
Position
6:complement(140495296..140504526)
AA seq 2058 aa
MPLFISDEEYERCAQDAVVVAAKADEFIRDLYNQLENVKAQADAASITAEQTCSVLEQKY
VSLSSEHSSLQLQYTQLNSSFEQRLSELSKVQAEKQQAYLQSIGKDGDVDRLSTEVSELR
KTKRQLMELVEQKDLEISEKNSTIKSYLDKIVNLTDVAANREVRICDLETEVSHCQASCS
RLLQEKELVERHNAWLNDELTAKVNGLMELRKAHSELETDLSAKLADAEKKFNECDRSLK
RKEEQVREMELKFTSLEQDLLSSKDVATAKEEQMSGEIATLNKLVELYKESFEEWSKKAG
ELEGVIKALETHGNQTENDYKEKLEKEVSAKKELMEEVACLKDKLAKSEAELKKGEDTLK
LLPLRYFSSESLPNPVEAGDTVEDDRMVVPSLPIGVVSGTALATSLLREGWSLAKMYIKY
QEAVDALRHEQLGRKQAQDVLERVLREIEEKAGVILDERAEHERLEDAYSVLSEKLQHSL
SQQDTLERNIQEFNADMRRRDRDYAVAQAEIVDLQEQVTVLLKECRDLQFRGGSVGPKND
DSLVSKSLIMFGAESNADDLGRLLSYKDINGLVEQNVQLRGLVRSLTDQIESRESELKEK
YEKELQKHIDEATSQVNAVLEKADEQDTMIKSLHASVAMYKKLFEERPLVSSDTQSHKSA
EVGRQEVMLLPDSSHEVLGRAQERAFERVKSLEEESSRLRSEIISLRSERDKSALEAQFA
RDKLDRYMKDFEIQREEHNAVITRNVEFSQLIVDYQKKLRESYESLNATEELSQKLKMEV
SILKDEKGMLINAEKRASDEVRNLSQRVHSLQVHLDTLQSTENVRDEARAAERKKQEEYI
KLIEKEWAEAKKELQEQRDSVRNLIPEREDALKNALRQIEEMRKELASTSHSVAAAEARA
VVAEARSADLEEKLQASQKKVSERANEGGPSSSTEIFEYMHSAEEVKRLREEVQVNKNHM
LQYKSIAQANEEALKQMELAYENLKIEADRVKKSMEEEALSLRKHVNELESECNLKSIEA
ASATAGKEEAVVAALAEISSLKEESSVKMTQISNFEAQITALKDDLDKVHQRWRGAQDNY
ERQVILQSETIQELTRTSQSLAALQEESSELRKLSDILKSENNALKAKWEEELSVLEVSK
TEAEKKYAEANEQNKILLDRLEGLHIKLAEKDRVSSGVSSGSTVAETDDGLMNIVNYLRR
SKEIAETEISLLRQEKLRLQSQLENALRRAEVAEASLNSERENSRAQVLSEEEFKSLQLQ
VRELNLLRESNLQLREENRHNVEECQKLRQAAQKMKTEMEDLEKLLNERQADVEACRKEI
EMLKLDKEKLERRVSELVERYKSFDLEEYASLKEAASQMQMNLREKDAELEKIKKAMSEQ
QNLVSNLEQDLTRSRAELSQRESRINEILQAEASLRSEIDKHRRLIAQIKKRAESLSKEK
DRADNLSKEKDDLARENQALSKQLEDAKQGKRAADVADEQALKDKEKEKNSRIQGLEKIT
DRLREELNRQKEEFNKEKTKRVKIQKAIGESFETVTQQRANLLDDLDKHKQALKMLTDEV
EKIRQTKDSQTEGTSVDQLLSGTHLEDFTAAYLLAVDDFDRVVRNEIGASGATDTSAPDA
SLFGSVVPGPAATPPPPASSLTSTPAVGKAVEERRLAISKITSETRKPPRKLVRPRITKP
EEPSADVEMQDADETTNSRKHVTPQNVENLDNATLPTQPPIRKRLSAASTSELQDETPAT
DETCLDVAQPVPKKSKRLEAPQESTEDKSAGNVEIAESLPTMEEHDAVDETQGLKEEASD
ILLDETTLSGEQVEEPSVATNQAESQVDRTDVADDTFVSSNEVSTPDNESTFQVQQERDQ
LATDDREEGELVADPEHVGNLEGGSNLSIGSPENLEPQIDDLAGTDEDPLLTPSDTGEIE
SSQLPDDDKDDEVDATEELAESYDKLNDGDQVAAETDQAVDTVVTGEKPSSSPVDSSNSK
EGGAGENVAVETEEGKQVSPVNRSSRTINLNERAKERASIRQAAMFSSTTTRGRGRVPRG
RGGRSARGGRSQISGPQG
NT seq 6177 nt   +upstreamnt  +downstreamnt
atgccgttgtttatatcggacgaggaatacgaacggtgtgcgcaagacgccgttgtggta
gcggcgaaagccgatgaattcatccgtgatttgtacaatcaactggaaaatgtgaaagcg
caggctgatgctgcatctattactgctgaacagacttgttccgtccttgaacagaaatac
gtttcgctttcgtcggagcactcttcgcttcaattgcagtacactcaactgaattcgtcc
tttgagcaacgtctatctgaactctctaaagtacaggctgagaagcagcaagcttatctc
caatctattgggaaggatggagatgtggaccggttatcaacagaggtttcagaactccgg
aaaacaaagagacaattgatggaattggtagagcagaaagacttggagatcagtgagaaa
aattccactatcaaaagctatcttgataagatagttaacttgactgatgttgctgcaaat
agggaagtgcggatctgtgacttggagactgaagtatcacattgtcaggcttcttgttcg
cgtcttttgcaggagaaggagcttgttgagaggcataatgcatggcttaatgacgagtta
acggctaaggtcaatggactcatggagctgcgtaaagctcattctgagcttgagactgat
ctgtctgccaaacttgctgatgccgagaaaaaatttaacgagtgtgataggtctttgaag
agaaaagaggaacaagtgagagaaatggagttaaagttcacttctttagagcaagattta
ctttcctccaaggatgtagcaactgcaaaagaggagcaaatgtctggtgagattgcaacg
ttaaacaagcttgtggagttgtacaaggagagctttgaggaatggtctaaaaaggcagga
gaacttgaaggagtaattaaagctttggagactcatggaaaccaaacagagaatgattat
aaagagaagcttgagaaagaggtatctgcaaagaaagaattaatggaggaggttgcatgt
ctgaaagataagcttgcaaaaagtgaagcggagttaaaaaagggagaagatacattgaag
ctccttcccttgagatatttttcgagtgaatcattgccaaacccagttgaagctggtgac
acggttgaggatgatcggatggtcgttcctagtttgcctattggtgttgtgtcgggaacc
gcattagccacttcacttcttcgggagggttggagtctggctaagatgtacatcaaatat
caggaagctgttgatgcgttacgacatgaacaattgggaagaaaacaagctcaagatgta
ttggagcgagtgctccgtgaaatagaggagaaagctggagttatcttggatgagcgagca
gaacatgaaagattggaagatgcttattctgtgctaagtgaaaaactgcagcattccctc
tctcaacaggatactttagagaggaatattcaggaattcaatgctgatatgagaaggcgt
gaccgtgattatgctgttgctcaggcggagatagttgacctccaagaacaggtgacagtg
cttttaaaggagtgtcgtgatttacaattccgtggtggatctgtgggacctaaaaatgat
gattccctggtgtcaaaatctttaattatgtttggtgctgaatctaatgccgatgatctt
ggaagactgttgagctacaaggacataaatggtctggttgaacaaaatgtccagctaaga
ggcctagttcgcagccttactgaccagattgagagcagagagtcagagttgaaggagaag
tatgagaaagagcttcagaagcatattgacgaagctacttcccaggtgaatgcagtactg
gaaaaagcggatgagcaggatacaatgattaaatcactccatgcatctgtggcgatgtac
aaaaaactctttgaagagcgtccacttgtttcttctgatactcaatcacataaatcagca
gaggttggaaggcaggaagtgatgcttttacctgattcttcacatgaagttctagggaga
gcacaagaacgggcttttgagcgtgtaaaatctcttgaagaagagtcgtcaagattacgg
agcgagataatttctcttcggtctgagagggataagtcagctctggaagcacagtttgct
cgagataaacttgacagatatatgaaagattttgaaatccagagagaggagcataatgct
gtcatcacgagaaacgttgagttctcacagttgatagttgactaccagaagaagctgcga
gaaagttatgagtcattgaatgctacggaggaactttctcaaaagctaaaaatggaggtg
tctattctaaaggatgaaaagggtatgttgataaacgccgaaaagagagcttcagatgaa
gtacgtaatttgtcacaaagggtgcatagtttgcaggtccatttagatacattgcagagt
acggagaacgtccgtgatgaggcaagagctgctgagaggaaaaagcaagaagagtatatt
aagctcattgagaaagaatgggctgaagctaagaaagaattgcaagagcagcgtgatagt
gttcgaaaccttatacctgagcgagaagatgctctgaagaatgcattgaggcaaattgag
gaaatgaggaaggaattagctagcacttcacattctgtggctgctgctgaagctagagct
gttgttgctgaggcacgatctgctgatttagaggaaaaattgcaagcttcgcaaaaaaag
gtttctgaaagagctaatgaaggtggtccttcctcctctactgaaatttttgagtacatg
cactctgctgaagaagttaaaagactcagagaggaggtgcaggttaacaaaaatcacatg
ctgcaatataaaagcatagctcaggcaaatgaagaagcattgaagcagatggaattggcc
tatgagaacctcaaaatagaagctgatagagtgaaaaaatcaatggaagaggaagcatta
tcgcttaggaagcatgttaatgagcttgagagtgaatgtaatttgaagtcaattgaagca
gcttctgcaactgcaggaaaagaagaagctgttgttgctgctttagctgaaatatccagt
ctaaaagaagaaagctctgttaagatgacacaaatttcgaatttcgaggctcaaataact
gctttgaaagatgatttggacaaagtgcatcaaagatggcgtggcgctcaagataattat
gagagacaagtaatcctgcagtcagaaacaattcaagaactcactagaacatctcaatct
ttggcagccttacaagaagaatcatctgagctccgtaaattgtcagatattctgaaatcc
gaaaataatgcattgaaggccaagtgggaggaagaattgtcggtgctagaggtatcaaaa
actgaagctgagaagaaatacgcggaggctaatgagcagaacaaaatattactggaccgg
cttgagggtttgcacattaaattggcggagaaggaccgtgtatcttcaggtgtatcttct
ggaagcacagtggctgagactgatgatgggttgatgaacattgtgaattatctaagacgg
tccaaggaaattgcagaaacagaaatttctttgctgagacaggaaaaacttaggttgcaa
tcgcagctcgagaatgctctgaggagagcagaggtagcagaagcatcacttaattctgag
cgagagaattcaagagctcaggttttaagtgaagaggagtttaaatcactgcagcttcag
gttagagaactgaacttacttcgtgaaagtaacttgcaattgagagaggagaacaggcac
aatgttgaagaatgccagaaacttcgccaagctgcccagaagatgaaaactgaaatggag
gatctggagaagcttctcaatgaaagacaagctgatgtagaagcttgtaggaaagagatt
gaaatgctgaagctggataaagagaagcttgagaggagggttagtgagttggttgagagg
tataagagttttgacctggaagaatatgcaagtctgaaagaagctgcttcacagatgcag
atgaatctgagagaaaaggatgcagaactggagaaaatcaagaaggccatgtctgagcag
cagaatctggtatctaacttagagcaagatctcactaggagcagagcagaattgagtcag
agagaatcgagaattaatgagattttgcaagctgaggcctcactgagatccgaaattgat
aaacatagaaggttgattgctcaaataaagaagagggcagaaagcttatcaaaggaaaaa
gatagggcagacaatttatcaaaggaaaaggatgatttggctagagagaatcaagctctc
tccaaacagttggaagatgctaaacaagggaaaagagctgctgatgttgcagatgaacag
gccttgaaagataaagagaaggagaagaactccagaatacaggggcttgagaagatcacg
gaccgtcttagagaagagttgaatcgtcaaaaagaagagtttaataaagagaaaacaaag
cgcgtgaagattcaaaaggcaataggtgaatcgtttgaaactgtgactcagcaacgagcc
aatctattagatgatctggacaagcataagcaggctctgaagatgcttactgatgaagtt
gagaagataaggcaaaccaaagacagtcaaacagagggcacgtcagtggatcaactactt
tctgggacccacttagaggattttactgctgcatatcttctagctgtagatgactttgac
cgggttgtacgtaatgagatcggagcttctggtgctactgacacttctgctccagatgct
tctctatttggctctgttgttccaggtccagcagctacgcctcccccaccagctagctcg
ttgacttccactcctgcagtaggaaaagcagtagaagaaaggagacttgctatatcaaag
ataacctcagaaactcgtaaaccaccaaggaagttggttcgacctcgcatcacaaagcca
gaagaaccttcagctgatgtagaaatgcaagatgcggatgaaaccactaacagcaggaag
catgtgacacctcaaaatgtagaaaatctagataatgccacattaccaactcaaccacca
attcgcaagcgcctatctgcagcatctacctcagaattgcaagatgagactcctgccacg
gatgaaacctgcttagatgtggctcaacctgtgcctaagaagtctaaacgtctagaggca
cctcaagaaagcactgaagacaaatctgctggtaatgtagaaattgcagaatctctgcct
actatggaggaacatgatgctgtagatgaaacccagggtttgaaagaggaagccagtgat
attttgttagatgagaccacactttctggggagcaggttgaagagccgtcagttgcaaca
aatcaggctgagtcacaggttgatagaacagatgttgcagatgatacttttgtcagttcg
aatgaagtatctaccccagataatgaatcaacatttcaggtgcaacaagagagagatcag
ctagcgacggatgacagggaagagggagagctagttgctgatcctgaacatgttggaaat
ctcgagggaggtagcaatttatcaattggaagcccagaaaatttggaacctcagattgat
gacttagctggtacggatgaagaccccttgcttactccatcagacaccggggagatagaa
tcttcccagctcccagatgatgataaggatgatgaggttgatgcgacagaagagctagct
gaaagttatgataagttgaatgatggtgaccaggttgctgcagaaactgatcaggctgtg
gatactgttgttactggtgagaaaccatcaagcagcccagttgatagtagcaattcaaaa
gaagggggggcgggtgaaaatgttgctgttgaaacagaagaagggaaacaggtttcacct
gtcaataggagctcaagaaccataaacttaaatgaaagggctaaagaaagggcttccatt
aggcaggctgctatgttttcctctacgacgacaagaggccgtggtcgagttcctcgtggt
cgtggtggtcgcagtgctcgtggcggtcgcagtcaaatctctggtccacagggttaa

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