Capsicum annuum (peppers): 107853094
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Entry
107853094 CDS
T04646
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107853094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107853094
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107853094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ATG17_like
KNOX2
Motif
Other DBs
NCBI-GeneID:
107853094
NCBI-ProteinID:
XP_016553591
LinkDB
All DBs
Position
6:complement(140495296..140504526)
Genome browser
AA seq
2058 aa
AA seq
DB search
MPLFISDEEYERCAQDAVVVAAKADEFIRDLYNQLENVKAQADAASITAEQTCSVLEQKY
VSLSSEHSSLQLQYTQLNSSFEQRLSELSKVQAEKQQAYLQSIGKDGDVDRLSTEVSELR
KTKRQLMELVEQKDLEISEKNSTIKSYLDKIVNLTDVAANREVRICDLETEVSHCQASCS
RLLQEKELVERHNAWLNDELTAKVNGLMELRKAHSELETDLSAKLADAEKKFNECDRSLK
RKEEQVREMELKFTSLEQDLLSSKDVATAKEEQMSGEIATLNKLVELYKESFEEWSKKAG
ELEGVIKALETHGNQTENDYKEKLEKEVSAKKELMEEVACLKDKLAKSEAELKKGEDTLK
LLPLRYFSSESLPNPVEAGDTVEDDRMVVPSLPIGVVSGTALATSLLREGWSLAKMYIKY
QEAVDALRHEQLGRKQAQDVLERVLREIEEKAGVILDERAEHERLEDAYSVLSEKLQHSL
SQQDTLERNIQEFNADMRRRDRDYAVAQAEIVDLQEQVTVLLKECRDLQFRGGSVGPKND
DSLVSKSLIMFGAESNADDLGRLLSYKDINGLVEQNVQLRGLVRSLTDQIESRESELKEK
YEKELQKHIDEATSQVNAVLEKADEQDTMIKSLHASVAMYKKLFEERPLVSSDTQSHKSA
EVGRQEVMLLPDSSHEVLGRAQERAFERVKSLEEESSRLRSEIISLRSERDKSALEAQFA
RDKLDRYMKDFEIQREEHNAVITRNVEFSQLIVDYQKKLRESYESLNATEELSQKLKMEV
SILKDEKGMLINAEKRASDEVRNLSQRVHSLQVHLDTLQSTENVRDEARAAERKKQEEYI
KLIEKEWAEAKKELQEQRDSVRNLIPEREDALKNALRQIEEMRKELASTSHSVAAAEARA
VVAEARSADLEEKLQASQKKVSERANEGGPSSSTEIFEYMHSAEEVKRLREEVQVNKNHM
LQYKSIAQANEEALKQMELAYENLKIEADRVKKSMEEEALSLRKHVNELESECNLKSIEA
ASATAGKEEAVVAALAEISSLKEESSVKMTQISNFEAQITALKDDLDKVHQRWRGAQDNY
ERQVILQSETIQELTRTSQSLAALQEESSELRKLSDILKSENNALKAKWEEELSVLEVSK
TEAEKKYAEANEQNKILLDRLEGLHIKLAEKDRVSSGVSSGSTVAETDDGLMNIVNYLRR
SKEIAETEISLLRQEKLRLQSQLENALRRAEVAEASLNSERENSRAQVLSEEEFKSLQLQ
VRELNLLRESNLQLREENRHNVEECQKLRQAAQKMKTEMEDLEKLLNERQADVEACRKEI
EMLKLDKEKLERRVSELVERYKSFDLEEYASLKEAASQMQMNLREKDAELEKIKKAMSEQ
QNLVSNLEQDLTRSRAELSQRESRINEILQAEASLRSEIDKHRRLIAQIKKRAESLSKEK
DRADNLSKEKDDLARENQALSKQLEDAKQGKRAADVADEQALKDKEKEKNSRIQGLEKIT
DRLREELNRQKEEFNKEKTKRVKIQKAIGESFETVTQQRANLLDDLDKHKQALKMLTDEV
EKIRQTKDSQTEGTSVDQLLSGTHLEDFTAAYLLAVDDFDRVVRNEIGASGATDTSAPDA
SLFGSVVPGPAATPPPPASSLTSTPAVGKAVEERRLAISKITSETRKPPRKLVRPRITKP
EEPSADVEMQDADETTNSRKHVTPQNVENLDNATLPTQPPIRKRLSAASTSELQDETPAT
DETCLDVAQPVPKKSKRLEAPQESTEDKSAGNVEIAESLPTMEEHDAVDETQGLKEEASD
ILLDETTLSGEQVEEPSVATNQAESQVDRTDVADDTFVSSNEVSTPDNESTFQVQQERDQ
LATDDREEGELVADPEHVGNLEGGSNLSIGSPENLEPQIDDLAGTDEDPLLTPSDTGEIE
SSQLPDDDKDDEVDATEELAESYDKLNDGDQVAAETDQAVDTVVTGEKPSSSPVDSSNSK
EGGAGENVAVETEEGKQVSPVNRSSRTINLNERAKERASIRQAAMFSSTTTRGRGRVPRG
RGGRSARGGRSQISGPQG
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtttatatcggacgaggaatacgaacggtgtgcgcaagacgccgttgtggta
gcggcgaaagccgatgaattcatccgtgatttgtacaatcaactggaaaatgtgaaagcg
caggctgatgctgcatctattactgctgaacagacttgttccgtccttgaacagaaatac
gtttcgctttcgtcggagcactcttcgcttcaattgcagtacactcaactgaattcgtcc
tttgagcaacgtctatctgaactctctaaagtacaggctgagaagcagcaagcttatctc
caatctattgggaaggatggagatgtggaccggttatcaacagaggtttcagaactccgg
aaaacaaagagacaattgatggaattggtagagcagaaagacttggagatcagtgagaaa
aattccactatcaaaagctatcttgataagatagttaacttgactgatgttgctgcaaat
agggaagtgcggatctgtgacttggagactgaagtatcacattgtcaggcttcttgttcg
cgtcttttgcaggagaaggagcttgttgagaggcataatgcatggcttaatgacgagtta
acggctaaggtcaatggactcatggagctgcgtaaagctcattctgagcttgagactgat
ctgtctgccaaacttgctgatgccgagaaaaaatttaacgagtgtgataggtctttgaag
agaaaagaggaacaagtgagagaaatggagttaaagttcacttctttagagcaagattta
ctttcctccaaggatgtagcaactgcaaaagaggagcaaatgtctggtgagattgcaacg
ttaaacaagcttgtggagttgtacaaggagagctttgaggaatggtctaaaaaggcagga
gaacttgaaggagtaattaaagctttggagactcatggaaaccaaacagagaatgattat
aaagagaagcttgagaaagaggtatctgcaaagaaagaattaatggaggaggttgcatgt
ctgaaagataagcttgcaaaaagtgaagcggagttaaaaaagggagaagatacattgaag
ctccttcccttgagatatttttcgagtgaatcattgccaaacccagttgaagctggtgac
acggttgaggatgatcggatggtcgttcctagtttgcctattggtgttgtgtcgggaacc
gcattagccacttcacttcttcgggagggttggagtctggctaagatgtacatcaaatat
caggaagctgttgatgcgttacgacatgaacaattgggaagaaaacaagctcaagatgta
ttggagcgagtgctccgtgaaatagaggagaaagctggagttatcttggatgagcgagca
gaacatgaaagattggaagatgcttattctgtgctaagtgaaaaactgcagcattccctc
tctcaacaggatactttagagaggaatattcaggaattcaatgctgatatgagaaggcgt
gaccgtgattatgctgttgctcaggcggagatagttgacctccaagaacaggtgacagtg
cttttaaaggagtgtcgtgatttacaattccgtggtggatctgtgggacctaaaaatgat
gattccctggtgtcaaaatctttaattatgtttggtgctgaatctaatgccgatgatctt
ggaagactgttgagctacaaggacataaatggtctggttgaacaaaatgtccagctaaga
ggcctagttcgcagccttactgaccagattgagagcagagagtcagagttgaaggagaag
tatgagaaagagcttcagaagcatattgacgaagctacttcccaggtgaatgcagtactg
gaaaaagcggatgagcaggatacaatgattaaatcactccatgcatctgtggcgatgtac
aaaaaactctttgaagagcgtccacttgtttcttctgatactcaatcacataaatcagca
gaggttggaaggcaggaagtgatgcttttacctgattcttcacatgaagttctagggaga
gcacaagaacgggcttttgagcgtgtaaaatctcttgaagaagagtcgtcaagattacgg
agcgagataatttctcttcggtctgagagggataagtcagctctggaagcacagtttgct
cgagataaacttgacagatatatgaaagattttgaaatccagagagaggagcataatgct
gtcatcacgagaaacgttgagttctcacagttgatagttgactaccagaagaagctgcga
gaaagttatgagtcattgaatgctacggaggaactttctcaaaagctaaaaatggaggtg
tctattctaaaggatgaaaagggtatgttgataaacgccgaaaagagagcttcagatgaa
gtacgtaatttgtcacaaagggtgcatagtttgcaggtccatttagatacattgcagagt
acggagaacgtccgtgatgaggcaagagctgctgagaggaaaaagcaagaagagtatatt
aagctcattgagaaagaatgggctgaagctaagaaagaattgcaagagcagcgtgatagt
gttcgaaaccttatacctgagcgagaagatgctctgaagaatgcattgaggcaaattgag
gaaatgaggaaggaattagctagcacttcacattctgtggctgctgctgaagctagagct
gttgttgctgaggcacgatctgctgatttagaggaaaaattgcaagcttcgcaaaaaaag
gtttctgaaagagctaatgaaggtggtccttcctcctctactgaaatttttgagtacatg
cactctgctgaagaagttaaaagactcagagaggaggtgcaggttaacaaaaatcacatg
ctgcaatataaaagcatagctcaggcaaatgaagaagcattgaagcagatggaattggcc
tatgagaacctcaaaatagaagctgatagagtgaaaaaatcaatggaagaggaagcatta
tcgcttaggaagcatgttaatgagcttgagagtgaatgtaatttgaagtcaattgaagca
gcttctgcaactgcaggaaaagaagaagctgttgttgctgctttagctgaaatatccagt
ctaaaagaagaaagctctgttaagatgacacaaatttcgaatttcgaggctcaaataact
gctttgaaagatgatttggacaaagtgcatcaaagatggcgtggcgctcaagataattat
gagagacaagtaatcctgcagtcagaaacaattcaagaactcactagaacatctcaatct
ttggcagccttacaagaagaatcatctgagctccgtaaattgtcagatattctgaaatcc
gaaaataatgcattgaaggccaagtgggaggaagaattgtcggtgctagaggtatcaaaa
actgaagctgagaagaaatacgcggaggctaatgagcagaacaaaatattactggaccgg
cttgagggtttgcacattaaattggcggagaaggaccgtgtatcttcaggtgtatcttct
ggaagcacagtggctgagactgatgatgggttgatgaacattgtgaattatctaagacgg
tccaaggaaattgcagaaacagaaatttctttgctgagacaggaaaaacttaggttgcaa
tcgcagctcgagaatgctctgaggagagcagaggtagcagaagcatcacttaattctgag
cgagagaattcaagagctcaggttttaagtgaagaggagtttaaatcactgcagcttcag
gttagagaactgaacttacttcgtgaaagtaacttgcaattgagagaggagaacaggcac
aatgttgaagaatgccagaaacttcgccaagctgcccagaagatgaaaactgaaatggag
gatctggagaagcttctcaatgaaagacaagctgatgtagaagcttgtaggaaagagatt
gaaatgctgaagctggataaagagaagcttgagaggagggttagtgagttggttgagagg
tataagagttttgacctggaagaatatgcaagtctgaaagaagctgcttcacagatgcag
atgaatctgagagaaaaggatgcagaactggagaaaatcaagaaggccatgtctgagcag
cagaatctggtatctaacttagagcaagatctcactaggagcagagcagaattgagtcag
agagaatcgagaattaatgagattttgcaagctgaggcctcactgagatccgaaattgat
aaacatagaaggttgattgctcaaataaagaagagggcagaaagcttatcaaaggaaaaa
gatagggcagacaatttatcaaaggaaaaggatgatttggctagagagaatcaagctctc
tccaaacagttggaagatgctaaacaagggaaaagagctgctgatgttgcagatgaacag
gccttgaaagataaagagaaggagaagaactccagaatacaggggcttgagaagatcacg
gaccgtcttagagaagagttgaatcgtcaaaaagaagagtttaataaagagaaaacaaag
cgcgtgaagattcaaaaggcaataggtgaatcgtttgaaactgtgactcagcaacgagcc
aatctattagatgatctggacaagcataagcaggctctgaagatgcttactgatgaagtt
gagaagataaggcaaaccaaagacagtcaaacagagggcacgtcagtggatcaactactt
tctgggacccacttagaggattttactgctgcatatcttctagctgtagatgactttgac
cgggttgtacgtaatgagatcggagcttctggtgctactgacacttctgctccagatgct
tctctatttggctctgttgttccaggtccagcagctacgcctcccccaccagctagctcg
ttgacttccactcctgcagtaggaaaagcagtagaagaaaggagacttgctatatcaaag
ataacctcagaaactcgtaaaccaccaaggaagttggttcgacctcgcatcacaaagcca
gaagaaccttcagctgatgtagaaatgcaagatgcggatgaaaccactaacagcaggaag
catgtgacacctcaaaatgtagaaaatctagataatgccacattaccaactcaaccacca
attcgcaagcgcctatctgcagcatctacctcagaattgcaagatgagactcctgccacg
gatgaaacctgcttagatgtggctcaacctgtgcctaagaagtctaaacgtctagaggca
cctcaagaaagcactgaagacaaatctgctggtaatgtagaaattgcagaatctctgcct
actatggaggaacatgatgctgtagatgaaacccagggtttgaaagaggaagccagtgat
attttgttagatgagaccacactttctggggagcaggttgaagagccgtcagttgcaaca
aatcaggctgagtcacaggttgatagaacagatgttgcagatgatacttttgtcagttcg
aatgaagtatctaccccagataatgaatcaacatttcaggtgcaacaagagagagatcag
ctagcgacggatgacagggaagagggagagctagttgctgatcctgaacatgttggaaat
ctcgagggaggtagcaatttatcaattggaagcccagaaaatttggaacctcagattgat
gacttagctggtacggatgaagaccccttgcttactccatcagacaccggggagatagaa
tcttcccagctcccagatgatgataaggatgatgaggttgatgcgacagaagagctagct
gaaagttatgataagttgaatgatggtgaccaggttgctgcagaaactgatcaggctgtg
gatactgttgttactggtgagaaaccatcaagcagcccagttgatagtagcaattcaaaa
gaagggggggcgggtgaaaatgttgctgttgaaacagaagaagggaaacaggtttcacct
gtcaataggagctcaagaaccataaacttaaatgaaagggctaaagaaagggcttccatt
aggcaggctgctatgttttcctctacgacgacaagaggccgtggtcgagttcctcgtggt
cgtggtggtcgcagtgctcgtggcggtcgcagtcaaatctctggtccacagggttaa
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integrated database retrieval system