Capsicum annuum (peppers): 107854243
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Entry
107854243 CDS
T04646
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107854243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107854243
Enzymes [BR:
cann01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107854243
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
107854243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
107854243
NCBI-ProteinID:
XP_016554730
UniProt:
A0A1U8F5N3
LinkDB
All DBs
Position
7:complement(2298175..2321772)
Genome browser
AA seq
1389 aa
AA seq
DB search
MKRREETIQVTKQPYIEDVGPRKIKSIQFSLFSESEILKQAEVEVFKAAYYESTKKPIPN
GLLDPHMGPPNKNGHCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS
SILLNDKERREYLKNMRNPKTEFLKKSYLQKKVVQRCTAMTTGQKTVACSNCGYMNGMVK
KGQIKILHERGNRFLDEPNAAIAHKREIRSSVSVPPELDPKTVYSLFKNMSDEDCELLYL
SDRPEKLLVTSIPVPPISIRPSVFVDGGTQSNENDISERLKKIIFANAGLLEEMSDPNPY
SRSLNLWINLQMEVAQYINSDVRGVPVQMQATTPLSGFTQRLKGKQGRFRGNLSGKRVEY
TGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRH
PDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR
TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQD
FLTSSFLITRKDTFYDRASFTLICSYMGDAMDPIDLPTPAFIKPVELWTGKQLFGVLLRP
YSKMRVYVNLTVTEKSYSGKEETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVL
LRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGETLVKQKQGEIDRNYKKCEDC
IQQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALHWRNSPLIMSQCGSKG
SPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEF
FFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGM
DPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICGIVNERLSYHDMSPEGGCSE
AFRASLSDFLIKNLAETLKKLREVLLLGEEQYAGDGREYLENIALNISGITKKQLQVFLN
TCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA
AKNITTPIITAKLLSSSNLTVARMIKARIEKTLLGQVAKSIKIVMASRLASIVISLDMET
IQVSQLCIDAYTVKQSILTSKLKVKEHQVKVLNPRKLEVFPHADKDKLHFELHRLKNKLP
SVVVKGITMVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHI
MEVQQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEILGITRHGVQKM
KDSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQVEL
NYQSDPMIS
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaagagaagagacaattcaagttactaaacaaccttacattgaagatgttggt
cctagaaaaataaaaagcattcaattttctctcttctcggagtctgaaattttgaaacaa
gctgaggttgaagtcttcaaagcggcttattatgaatctactaaaaaacctattccaaat
ggcttgttggacccccacatggggcctccaaacaagaacggacattgtgaaacatgtcat
ggtaactttagagagtgtccaggtcattacgggtacttggttcttgctctaccagtttat
aatgttggatatttaggcaccgtcgtggacattttgaagtgcatatgcaagtgctgctcc
tcgatacttctgaatgacaaggagcgtcgagaatacttgaagaacatgagaaatccgaaa
actgagtttttgaaaaagagttacctgcaaaaaaaggtcgttcaaaggtgtactgccatg
acaactggtcagaaaactgtcgcatgttccaattgcggatacatgaatggtatggtgaaa
aagggtcaaataaaaatcttacatgaacgaggaaatcgtttcttggacgagcctaatgca
gctatcgctcacaagagagagatccggtcctctgtcagtgtccctccagaacttgaccca
aaaacagtttactccctttttaagaatatgtctgatgaggattgtgagttactctacctc
agtgatagaccagaaaaactccttgttacaagtattccagtgccaccaatatcaattcgc
ccttctgtatttgtggatggtggaacacagagcaatgagaatgacatttcggagaggctt
aagaaaattatttttgcaaatgctggtcttctcgaagagatgtctgatcccaatccttac
agtaggagtctgaatctttggattaatctgcaaatggaagttgcacaatatataaacagt
gatgttcgtggagtgccagtacagatgcaagcaactacaccactgagtggtttcactcaa
cgtcttaaaggaaagcagggacgattccgtggaaatctctctggaaagcgtgtggaatat
actggccgaactgtcatatctcctgatccaaatttgaaaattacagaggttgccattcca
atactgatggctcgaattttaacatatcctgagcgagtttcacagcacaatatagagaag
ttaaggcaatgtgttcgtaatggaccaaataagtatcctggtgcaaagtttatcagacat
cccgatggaactgaaatatcgttgatgttctcttctagaaagcgtcatgctgatgaattg
aaatttggttatatcgttgatcgacatctagaagatggagatatagtcctgtttaacaga
cagccaagtctgcatagaatgtcaattatgtctcaccgggcaaggataatgccatggcgt
actttgaggtttaatgaatctgtatgcaacccttataatgctgattttgatggtgatgag
atgaatatgcatgtgccacaaacagaagaggcgaggacagaggctcttatgttaatgggg
gttcaaaacaatttatgcactccgaagagtggagaaattttggttgcttctacccaggat
tttctgacgtcttcctttctcattacgaggaaggacacattctatgatcgtgcttccttt
acacttatatgctcatatatgggtgacgcaatggatccgattgatttaccaactccagca
tttattaagccggttgagctttggactgggaaacaactctttggtgtgctattgcgtcca
tattcaaagatgagagtttatgtaaacctaacagtaacagaaaagagttacagtggaaaa
gaggaaacaatgtgcccaagtgatggatttgtttatttccgaaatagcgaactgatcagc
gggcaacttgggaaggctacattaggaaacggaaataaagatggtttgtactctgttctg
ttgagagactacaagtcccatgctgctgcaacatgcatgaatcggcttgcaaagttaagt
gctcggtggattggaaatcatggattttccataggtattgatgatgtcacacctggggaa
accttagttaagcaaaaacaaggagagattgatagaaattacaagaaatgtgaagattgt
attcaacaatttaatgaaggaaagcttgctgtacaaccaggctgtgatgctgcgcagact
ctggaggctgaagtaactatgtcgctgaataaagttcgtgacgacataggaaaaatttgt
atgaaagcactacactggaggaatagtcctctaatcatgtcacagtgtggttcaaaagga
tccccaattaacattagtcagatgattgcgtgtgttggtcagcagtccgttggtggccgt
cgtgctcctgatggattcatagatcgaagtcttcctcattttccgttcaaatcaaaattt
ccagctgctaaggggtttgtagctcattccttttttgacggtttatcagcaactgagttc
ttttttcacacaatgggaggaagagaagggcttgttgatacggcggtcaaaactgctgac
accggatacatgtctcgtcgacttatgaaagctttagaggatcttgccgtttattatgac
agcactgtacgaaatgctagcgcatgtatagttcagttcatgtatggtgatgatggcatg
gatccttcacagatggaagagaagaaaggacgtcctctgaactttagcagattatttatg
aaagttaaggcaacatgtcctcctggaggtgagaagagtttgtcttactcagaaatctgc
gggatagtcaatgaaaggctctcatatcatgatatgagtcctgaaggcggttgctcagag
gcattccgtgcttcgctgtcagattttttgattaaaaatttagctgaaactttgaaaaaa
ttacgggaagtactattattgggtgaagagcagtatgcaggggatggccgtgaatatctt
gagaacattgcgttaaacatatctggtattactaagaagcaactacaggtgttcctcaac
acgtgcatctctcgatatcacctaaaaagactagaatctggaactgcaattggtgcaatt
ggagctcagagtatcggggagcctgggacacagatgacgctaaaaacctttcactttgct
ggagttgcaagcatgaatgttacacttggagttcctcgaataaaagaaatcataaatgca
gcaaaaaatatcacgactcctattattacggcaaaacttctgtcctcttctaatttgact
gtcgcaaggatgattaaagcccgtattgaaaaaactcttttggggcaggtggctaagagt
ataaagattgttatggcatctcgattagcatcaattgttatttcacttgatatggagaca
attcaggtgtcacaactgtgtattgacgcttacaccgtcaagcaatcgattttgacttca
aaattaaaagtgaaggaacatcaagtaaaagttttgaatcccaggaagctagaagttttt
cctcacgctgataaagataaactgcatttcgaactgcaccggctgaaaaataagcttcct
tccgttgttgtgaagggtattactatggttcaaagggccgtggtgaacaaggaacagcaa
aaggatcgtaaaagtgatgtcaaaggagaaacatacgaattgcttgtcgaaggtactggt
ctcctagccgtaatgggcattgaaggagttgatggacgtaatacaaagagcaatcatata
atggaggtgcagcaaactctaggcattgaagcagcacgggtctcgattatcgatgagatc
aattataccatgtcaagtcatggaatgacaatcgacttgcggcacatgatgcttcttgca
gatctgatgacgtataagggtgaaatcctgggtataactagacacggcgttcagaaaatg
aaagatagcgtactgatgttagcttcgtttgagaagacaactgaccacctgtttaatgca
tccgtaaatggaagggatgataagatagaaggcgtcagcgaatgtatcatcatgggaata
ccaatgcagataggcactgggatgtttaaacttcggcaatgtgttgagcaggtcgagctg
aattatcaatccgatcctatgatatcctag
DBGET
integrated database retrieval system
