Capsicum annuum (peppers): 107877504
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Entry
107877504 CDS
T04646
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X2
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107877504
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cann01001
]
107877504
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107877504
03036 Chromosome and associated proteins [BR:
cann03036
]
107877504
Enzymes [BR:
cann01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
107877504
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107877504
Protein kinases [BR:
cann01001
]
Serine/threonine kinases: Other
TAF1 family
107877504
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107877504
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
107877504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
ubiquitin
TBP-binding
Rad60-SLD
zf-CCHC_6
Ubiquitin_5
HTH_3
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
107877504
NCBI-ProteinID:
XP_016579649
LinkDB
All DBs
Position
7:complement(496280..521240)
Genome browser
AA seq
1856 aa
AA seq
DB search
MGYEAGGTSRDGRDEDDDEEYEEAGGGNRFLGFMFGNVDYSGDLDVDYLDEDAKEHLAAL
ADKLGSSLTEIDLSVKSPQASADAAEQDYDEKAEDAVDYEDIDEQYEGPEVQTVTEEDLL
LPKKDYFSTEVSLTTLENRASVFDDENYDEDDNDEEKEQEVVENTAEAQSTPGKGEYNND
ASVLLHGEKVPEEVISTDAPESSEDLQEDEPLALEEPVDSQSSMPLPVLCVEDGVAILKF
SEIFALHKPRKKAEKRERRCSVPKDKHKAMDTLDSVEEDEVTLLRGSYEEFPWLRMSHVH
HDSSLMLLDNEPGTVQETDDLKPKIEKKDSCCSAEPMKENLPMDLSTDWSSPNCPEFYPL
DQQDWEDRIIWDNSPPLSDNTAESCEISEPDYEALTDKQLDVEAESQSFQSEKEIEPHEK
SHSSFFSCSVSVEPFDSKQPSRHLDSSLSEGRYHPQILRLESRLNAVRQKSTDTPKDEAT
DESLSSDASRRFSKLTLQNRDILEESWVDNIIWEPDQSFPKPKLIYDLQDEQMLFEVLDN
MDGQQLLHHAGAMTTTGLIKPNDGDSAELYGLSDLSGSFNIANDKFYLNRKSTQQLKSHS
KKRTAHGLKVLHSIPALKLQTMKAKLSNKDIANFHRSRALWYPHDNEVVLKEQRKLPTQG
PMKIILKSLGGKGSKLHVAAEETISSLKSKASKKLDFKLSESVKIIYCGKELEDDKSLSA
QNVPPNSVLHLVRTRIHLLPRAQRLPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEER
PLLLGNVGMGARLCTYYQKLSPNDQQGTLMRSGNTGLGSVLTLDSADKSPFLGDIKPGCS
QSSLETNMYRAPIFQQKVSSTDYLLVRSTKGKLSIRRIDRIDVVGQQEPHMEVTSPGSKG
VQTYIMNRLLVYMYRQFRAIEKRGSRPFIRADELSAQFPSLSEAFLRKRLKHCADLQRRS
NGQFQWVMRFNFRIPSEEELRRMVSPESVCAYESMQAGLHRLKRLGITRLTHPTGLSAAM
NQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGF
SYVRTTTKAPISNAISKKKAVVAKGSTVTGTDADLRRLSMEAAREVLLKFNVPEEQIAKL
TRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQN
LSAVDGEENESDAEANSDLDSFAGDLENLLDAEDFEDGEEGSHEPKRDNVDGVKGLKMRR
RPFQAQVEEEIEDEAAEAAELCRMLMDDDEADRKKKKKDKAMGEQVGFIPDIRYSFVTES
IDRGKKPQIFAKPSLKSDGPFALDFGGNQKEAEGFSIKRTPPSKVKPKKKFDVMDAGLFN
KKVKILGDGIKPLKEKKSARDSFVCGACGQLGHMRTNKNCPKYGEDVEARAEITDLEKTT
GKSLSSTDHLDQPQIFSKKVIQKNGTKNVMLDAHEDDNSSSKAKVLKVKCSSTDKLPDKP
TPATSVNSEIPVTSDAETGTVPPPMKFNKIKFSNKMRAEDVSNEAHKSSIVVRPPAESAD
SHRSKKIVIKQLKDSSSMDEGFLDGNGGMEFRKTKKINELSYFGQQEREYFYEEALGRKR
MDDKRLWEEEERRMAVKQREERNKMYERQKALEEQEKLAAIESYQDAIRREREEEERLKE
KKKKKKKPEIRDDYFDDFLPRRNDRKIPDRDRSVKRRQTFESGRHARDHAPPKKRRRGGE
VGLSNILEEIVETLKSNVNVSYLFLKPVTRKEAPDYHKYVKRPMDLSTIKEKARKLEYKN
RGQFRHDVAQITINAHLYNDGRNPGIPPLADQLLEICDYLLEENDSILAEAESGIE
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgggctatgaagctggtggtacatcccgtgatgggcgtgatgaagatgatgatgaggaa
tatgaggaagctggtggcggtaaccgatttttgggatttatgtttggaaatgttgattac
tctggtgatctcgatgttgactaccttgacgaggacgccaaggagcatcttgctgcttta
gctgacaagcttggttcgtctctgacagagatagatttgtcggtgaagtccccacaagca
tctgcagatgctgctgaacaagattatgatgagaaggcagaggatgctgtagattatgag
gacattgatgagcaatatgaaggacctgaggtacaaactgtgaccgaagaggacctatta
ttgccgaagaaggattatttttcaacagaagtctctttaactactttggagaatcgtgct
tctgtttttgatgatgaaaactatgatgaggatgataatgacgaggagaaggaacaggag
gtggtagagaatactgctgaagctcaatctactcctggaaaaggagagtataacaatgat
gcttcagtgcttttgcatggggagaaggttccagaagaagttatatccacagatgctccc
gaatctagtgaagatcttcaggaggatgaacctcttgctttggaagagccagttgatagt
caaagctctatgcctctacctgttctttgtgtagaagatggggtggcaattctgaagttc
tctgaaatttttgccctccataaacctcggaagaaagcagagaagagggagcggcgttgc
tctgttcctaaagacaaacacaaggccatggacacgctggatagtgttgaagaagatgaa
gttacattactgagagggtcctatgaagagtttccttggttgagaatgtcccatgtacat
catgatagttctttaatgttgctggataatgaaccaggaacagttcaagagactgatgac
ttaaagccaaaaatcgagaaaaaggattcttgttgtagtgctgaaccaatgaaagaaaat
ctaccaatggatctttctactgattggagctcacctaattgtcctgagttctatcccctt
gaccagcaagattgggaggatagaattatttgggataattctcctccattgagtgataat
actgctgagagttgtgagatttctgaacctgattatgaagcattgactgataaacaactg
gatgtggaggctgagtctcaaagtttccagtcagaaaaagaaatcgaaccccacgagaaa
agtcatagctcctttttttcttgcagtgtttctgtggagccttttgattcaaaacaacct
tcacgacatctggatagttcattatcagaaggaagatatcatcctcagattttgagatta
gagtctcgcttgaatgcagttaggcaaaagagcacagatactccaaaggatgaagctact
gatgaaagcctcagtagcgatgcctcaaggcgatttagcaagcttacattacaaaataga
gatatactggaggaatcttgggtggacaacattatttgggaaccagatcaatcctttccg
aagccaaagctcatatatgatcttcaagacgaacaaatgcttttcgaagttttggataac
atggatggccaacagcttctgcatcatgctggagcaatgaccacaactggtttaataaag
cccaatgatggtgattctgctgagttatacggtcttagtgatttatccgggagtttcaat
attgccaatgacaaattctatctgaacagaaagtcaactcagcaactaaagtcacattca
aagaaacgcactgcacatggtcttaaagttctgcattcaatacctgctcttaagctgcag
acaatgaaggctaagctaagcaataaagacatagcaaattttcatcggtcaagagcttta
tggtatccccatgacaatgaggtggtacttaaggaacagagaaagttgcctacacaaggg
ccaatgaaaatcatattgaagagcttgggtggcaaaggaagtaaacttcatgtagcagca
gaggagaccatttcttcccttaagtcaaaggcgtccaagaagcttgatttcaaactgtct
gagtcagtgaagataatttattgtgggaaggagcttgaagatgataaatctctttctgca
caaaatgtgccaccaaactctgtgctgcatcttgttcgtacaaggatacatttgttgcct
agggcacaaaggcttcccggtgagaacaagtctctgcgtcctcctggggcatttaagaaa
aaatctgatctttccgtgaaagatggccatgttttcctaatggaatactgtgaggagaga
cctttgctccttggaaatgttggaatgggtgcacgattgtgtacttattaccaaaaatta
tctccaaatgatcagcaaggcaccttgatgcgcagcggaaatactggattggggagtgtg
ctcacacttgattctgctgataaatcccccttccttggggatataaaacctggttgcagc
cagtcatctctcgaaacaaatatgtatagggcaccaatatttcagcagaaggtctcatca
actgattatttgttggttcgctcaacaaagggtaaactgtccataaggcggatagacagg
attgatgtcgtagggcaacaggagcctcacatggaggtaacctctcctggatcaaaaggt
gttcagacctacataatgaacaggctattggtatatatgtatcgtcaatttcgtgctatt
gaaaaacgcggttcacgtcctttcatccgtgcggatgagctgtctgcacagtttcctagc
ttgtcagaggcctttcttaggaaaaggctcaaacattgtgctgatttgcagagaagatca
aatggacagttccaatgggttatgaggttcaattttcggataccatctgaggaggaattg
aggaggatggtttcgccagaaagtgtatgtgcatatgaaagcatgcaagctggcctccat
aggcttaagcgcctaggtattacgcggcttactcatcctacaggtctatcagctgcaatg
aaccagctcccagatgaagcaattgctttagctgctgcatcacatattgaaagggaactt
caaatcacaccttggaacttgagtagcaattttgttgcctgcacaaaccaggatagagaa
aatattgagcgtctggaaattactggtgttggtgatccatctggtcggggattagggttc
agttatgtccgcaccactactaaggcaccaatatcaaatgcaatctccaagaaaaaagca
gttgttgccaaagggtcaacagtaacaggcactgatgcagacttacgaagactgagcatg
gaagctgcacgggaggttcttctcaagtttaatgttccagaggagcagattgctaaacta
acaaggtggcaccgaattgctatgattcgcaagctttctagcgagcaagctgcatcaggt
gttaaggttgatccaacaacaataagcaaatatgctcgtggccagcgcatgtcctttttg
cagctgcagcagcaaactagagaaaagtgtcaggagatttgggaccgacaagtccaaaat
cttagtgcagttgatggtgaagaaaatgagagtgacgctgaagcaaacagtgacctagac
tcatttgccggtgacttggaaaatcttcttgacgctgaggatttcgaggatggagaggag
ggtagtcatgagccaaaacgtgataatgtagatggagtcaaaggactcaagatgagacgg
cgcccctttcaggctcaggtggaagaggaaattgaggatgaggcagctgaagctgcagaa
ttatgccgcatgctcatggatgacgatgaagctgatcggaagaagaaaaagaaggacaaa
gccatgggggaacaagttggttttataccagatataagatacagttttgttactgaaagc
attgatcggggtaaaaaacctcagatattcgctaagccaagcctcaagtctgatgggcca
tttgcattggatttcggtggaaatcagaaggaggctgaaggtttttctattaaaagaact
ccacctagcaaggtgaaacccaagaaaaagtttgatgttatggacgctggattgtttaat
aagaaagttaaaatattaggggatggaataaagcccctgaaagagaagaagtcagcaaga
gacagctttgtctgtggagcctgtggtcagcttggtcacatgagaactaataagaattgt
cccaagtatggggaagacgtggaggcacgagcagaaattactgatctggaaaagactaca
ggaaaatctctgagttctactgatcacttggatcagcctcagatcttctcaaagaaagtc
atccaaaaaaatggaacaaagaatgtgatgctcgatgcacacgaggatgataattccagt
tcaaaggccaaagttctaaaggtcaaatgtagctcaactgataagcttcctgataaacct
actcctgctacctcagttaattctgagataccagtcacttcggatgctgaaactggaact
gtaccaccccccatgaaatttaataaaatcaagttctcaaataagatgagagctgaggat
gtttccaatgaagctcacaagtcttccatagtggtaaggccaccagcggagagtgcagac
tcacatcgcagcaagaaaattgtaattaagcagcttaaggactcctcaagtatggatgaa
ggcttcctggatgggaacggtggcatggagttcagaaagacgaagaaaatcaatgaattg
tcgtacttcgggcagcaagagagggaatacttctatgaagaggctttaggaaggaaaaga
atggacgacaaacgattatgggaagaggaggagaggagaatggctgtgaagcagagagaa
gaaagaaacaagatgtatgagcgacaaaaggcattagaggagcaggagaaattagcagcg
attgaaagctatcaagatgccataagaagagagagggaagaagaagaacgtctaaaggag
aagaagaagaaaaagaagaagcctgaaataagagatgattactttgatgattttcttccc
agaagaaatgacagaaagataccagatcgagacagatctgtgaagcggaggcaaactttt
gagtccggaaggcatgctagagaccatgcaccgccaaaaaagcgccgaagagggggagag
gttggtttgtcaaatattttggaagaaattgttgagacactgaagtcaaatgtgaatgta
tcgtacctcttcttgaagccagtgactcgaaaggaagctccagattatcacaagtatgta
aagcgtcctatggacctatctacaatcaaagagaaagccaggaaactggaatataaaaac
cgcgggcaattcaggcatgatgtggcacagatcaccatcaatgcacatctgtacaatgat
gggcggaacccaggtattcctccccttgcagatcagcttctagagatttgtgactacttg
ctcgaagagaatgattccatcttagctgaagctgaatctggcattgagtga
DBGET
integrated database retrieval system
