Kaistella antarctica: NCTC13489_01513
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Entry
NCTC13489_01513 CDS
T06886
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cant
Kaistella antarctica
Brite
KEGG Orthology (KO) [BR:
cant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cant03009
]
NCTC13489_01513 (rimO)
Enzymes [BR:
cant01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NCTC13489_01513 (rimO)
Ribosome biogenesis [BR:
cant03009
]
Prokaryotic type
ribosomal protein modification factors
NCTC13489_01513 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
VEH99392
UniProt:
A0A3S5EUS8
LinkDB
All DBs
Position
1:complement(1645881..1647182)
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AA seq
433 aa
AA seq
DB search
MRTKSVGKKKINIVTLGCSKNVYDSEVLMGQLQANGKEVVHEDKGDIVVINTCGFIDNAK
EESINTILEYVEAKNRGEVEQVFVTGCLSERYKPDLIREIPDVDQYFGTRDLPLLLKHLG
ADYKHELVGERMVTTPRHYAYLKISEGCDRPCSFCAIPLMRGKNISTPIENLVIEAEKLA
KKGVKELILIAQDLTYYGLDIYKKRALGDLLLRLVKVEGIEWIRLHYAFPTGFPEDVLEI
IRDEPKVCNYIDIPLQHINSDLLKAMKRGTSHEKTNALLAKFRQMVPDMAIRTTLIVGFP
GETEERFQEMKEWVREQRFDRLGCFTYSHEENTTAYVLEDDVPQEVKEARVEEIMELQSQ
ISWEKNQERIGKLYRCIFDRKEGNYFVGRTEFDSPDVDNTVLVSAENTYLSIGEFAEIRI
TSAEEFDLYGELI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgaaatcagtaggaaaaaagaaaatcaatatcgtaactcttggatgttccaaa
aatgtctacgattctgaagtcttgatgggacaattacaagccaacggaaaagaagtagta
cacgaagataaaggcgatatcgtggttattaatacgtgcggtttcatcgataatgcaaaa
gaagaaagcatcaatacgattctcgaatatgtagaggcaaaaaatagaggcgaagtagag
caggttttcgttacaggttgtctgtccgagagatacaagccagatttaatcagagagatt
cctgatgttgatcaatatttcgggacacgggacttacctttattattaaagcatttaggt
gcagattataaacacgaattggtaggtgaaagaatggtgaccacgccaagacattatgct
tatttaaagatttctgaaggttgcgaccgtccatgttcattttgtgcaattccattaatg
agaggaaaaaatatttccacaccaattgaaaacttagtgattgaagctgagaaattagcc
aagaaaggagttaaagaattaatcttaattgctcaggatttaacctattacggtttagat
atctataagaaacgtgccttaggagatttacttttgcgtttggtgaaagtagaaggaatt
gagtggattcgtttacattatgctttccctacaggtttccctgaagatgttttagagatc
atcagagatgaaccaaaagtttgtaactatatcgacattcctttacagcacatcaattct
gatttgttgaaagctatgaaacgtggaacttctcatgaaaaaacaaatgcattattagcc
aaattcagacagatggttccagatatggccatcagaacgacgctgattgttggtttccca
ggcgagaccgaagaaagattccaggaaatgaaagaatgggttcgggagcaaagattcgac
cgtttaggttgcttcacctattcccatgaagaaaacacgacggcttatgttttagaagac
gatgttcctcaagaagtaaaagaagccagagtagaagagatcatggaattacagtctcag
atttcttgggaaaaaaaccaggagagaatcggaaaattgtaccgttgtattttcgatcgt
aaagaagggaattatttcgtaggacgaactgaattcgattcaccagatgttgacaataca
gttttagtttctgccgaaaacacctatttatcgattggagaatttgccgaaattagaata
acttctgcggaagagttcgatttgtacggagagttgatttaa
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