KEGG   Crassostrea angulata (Portugese oyster): 128178765
Entry
128178765         CDS       T09348                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
canu  Crassostrea angulata (Portugese oyster)
Pathway
canu03020  RNA polymerase
canu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:canu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    128178765
  09124 Replication and repair
   03420 Nucleotide excision repair
    128178765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:canu03021]
    128178765
   03400 DNA repair and recombination proteins [BR:canu03400]
    128178765
Transcription machinery [BR:canu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     128178765
DNA repair and recombination proteins [BR:canu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      128178765
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom DUF3716 Ogr_Delta CpXC
Other DBs
NCBI-GeneID: 128178765
NCBI-ProteinID: XP_052702044
EnsemblRapid: LOC128178765
LinkDB
Position
3:complement(1781208..1785475)
AA seq 127 aa
MDLYETHDDGPGFVGIKFCKECNNMLYPKEDKENKLLLYACRNCDYQEEATNPCIYVNKI
THEVDELTQIIGDVIADPTLPRTEDHPCPKCAHKESVFFQSHSTKAEEGMRLYYVCTNPQ
CVHRWTE
NT seq 384 nt   +upstreamnt  +downstreamnt
atggatttatacgaaacacacgacgatggtccaggttttgtgggaatcaagttttgtaaa
gaatgtaacaatatgttgtatccaaaagaagacaaagaaaacaaactgttgttatatgct
tgccgaaactgtgattaccaagaggaggcaaccaatccctgcatctatgtaaacaagatc
acccatgaagtcgatgagctgacacagattattggggacgtgatagccgacccaaccctg
ccccgaacagaggaccacccttgtcccaagtgtgcccacaaagaatccgtcttctttcag
tctcacagcaccaaggcagaggaaggcatgcgactctactatgtttgcaccaacccccag
tgtgtgcatcgctggaccgagtag

DBGET integrated database retrieval system