KEGG   Crassostrea angulata (Portugese oyster): 128183641
Entry
128183641         CDS       T09348                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
canu  Crassostrea angulata (Portugese oyster)
Pathway
canu03020  RNA polymerase
canu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:canu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    128183641
  09124 Replication and repair
   03420 Nucleotide excision repair
    128183641
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:canu03021]
    128183641
   03400 DNA repair and recombination proteins [BR:canu03400]
    128183641
Transcription machinery [BR:canu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     128183641
  RNA polymerase III system
   RNA polymerase III
     128183641
  RNA polymerase I system
   RNA polymerase I
     128183641
DNA repair and recombination proteins [BR:canu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      128183641
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 128183641
NCBI-ProteinID: XP_052708704
EnsemblRapid: LOC128183641
LinkDB
Position
5:46029032..46032782
AA seq 128 aa
MADDEHDVDNFDDDIDDDDEPLDEAVETQDDGDPIDILPADQATQAVEPQKRITTPYMTK
YERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRFLPDGSFEDWG
IDELLMTE
NT seq 387 nt   +upstreamnt  +downstreamnt
atggcggacgatgaacacgatgtcgacaactttgatgacgatattgatgatgatgacgaa
cctcttgatgaagcagtggaaactcaagatgatggtgacccaattgacatcctcccagct
gatcaagcaactcaagctgttgagccccaaaaacgaatcacaaccccatacatgaccaaa
tatgagcgtgcaagagtcttaggaacaagggcactgcagattgctatgtgtgcacctgta
atggtggaattagaaggagagactgacccactactgattgccatgaaagaactcaaagcc
aggaaaatccccattattattcgccgatttctccctgatggaagttttgaggactgggga
atagatgaactcttgatgacagagtga

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