Crassostrea angulata (Portugese oyster): 128184965
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Entry
128184965 CDS
T09348
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4-like isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128184965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
canu03032
]
128184965
03036 Chromosome and associated proteins [BR:
canu03036
]
128184965
03400 DNA repair and recombination proteins [BR:
canu03400
]
128184965
Enzymes [BR:
canu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
128184965
DNA replication proteins [BR:
canu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128184965
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
128184965
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
128184965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
HSP70
VWA_3
VWA
BRCT_2
VIT_2
Actin
VWA_2
BRCT
PTCB-BRCT
Nucleoporin_FG
PARP_reg
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
128184965
NCBI-ProteinID:
XP_052710581
EnsemblRapid:
LOC128184965
LinkDB
All DBs
Position
5:8361770..8404461
Genome browser
AA seq
2416 aa
AA seq
DB search
MEGVLAGCQIVLDLSTSVGFKKKQEVRSTITQNGGVISYIVTKKSTHVVLNDAEKADVSY
KCKIAAKFRIPVVSLDFIFDCISQGKLLDTDNYLLVGKTKAQEFSSGKISAGKSELRSDG
KKKKTISTFNPKSVKAWKEKDKNMPAFDEESEVAKFAMFQKYDKKSNSTQFGVLEIHALT
RVTAFDNKDPPPRFCVCSHSGSVEDLQDKGDGGSKEYRFVQTSEEALSVYSALYKQMKDP
PSSMNVCHKPPCQNIGTKQFQKLILEYGMEETELSAPVAELMQHIWREAGGEIEQVLSSP
LQSIKLDQVEKATAILTHMKESQSDNSKLQALFDEFYTALPHRPQYRTTSFSMSWLARKL
DLCQLIKDVVSVSEATNWSTRGNAEAQYKALRCQISHVSGGLPRQVLDILNLKQGEEMRI
QNVYAIHRPSESEKFRSDLSSRPLFHASNAENFVGILSRGLLMPKVVVDDYGGKRTDPGM
LGHGIYFASSASTSIKYSKPSKTRNTRMMLVSQVALGTTLDVYKHQRDLTEPPSGYHSVH
GVAATEGVESEFQDDEFVVYNTDQQMLSYLVEFTIGSEIPVEISVEKEALEREETLSESS
IDISDVHDVTDPLTKVKAGLVSNDDTPVTLLEAHIRAKLIDLAGEVVVLQEYHNNSDQAL
EAKYVFPLDDMAAVCGFEAFINGKHIVGEVKEKETAHREYKRAVQEGHGAYLMDQDEETP
EVFTVSVGNLPPGAVVVIKITYVTELQVDGDLINFRLPGSVAPWKQKYVDAPEFKDKDWD
TVQVGNTCCSVQVYVDMPFDIRSLECPTHKVLSKRTATKAVVEIPDESDQTLEDGFQLLI
GLAEIHVPRMWVESDEGESQACMLTFYPEFEADEESEVEVILMIDSSNSMKDSSHRDAKK
AALLVLHLMDPTWRFNVVSFGTAFTELFPLSQPASKFNVQTAKQHIQKLQANQGNTELYR
PLHSYYLLKPESSTRNIFLFSDGYINNDEDTLAKVSQNSQHTRIFTMGISSVANRHLLKA
ISRVGAGSYEFYDSKFKSKWEDKVRSQLQKAAQPVLTSVSVDWRHDDQHPAPIQAPEQIT
ALFSSSRQVIYGFVDNCYMATLKAKIGGQEISTVVSTSDLSVTKGKMLHRLTAKGVIRDW
EDGVLSPDRTSHEVKKMNLKQYVIELSKRYSIVTSLTSFVAIEKREKDEVIPDSFPDVGD
LLIKEDVDMLKYLSWDNEADTTSYEEDTSSEEGTSSGDEEEEEKEEYAEELYSLECMVNY
EMEEVGDSYEEFFDGGGGGGGTEKIESTEGCSMLSDDDEEDDLQPIVMDMGSLFMKAGFA
GDDTPRAEFETTVGRPRHQGVMVGMGQKDAYVGKEATGSKPIAGKVLKGKSPADKAQDKV
VLLGKMSSERTKKKLAGKEKSYSKVCSSDESDVDDLGFNLFGDDDDDDDYERPQSFKSTG
KISSIIGQPLSAKNLRVDTFKPPEVQLQSAPSSMSGLALPGVMRGGVSSRKVHGNVSKGA
VPAEKSKGVGYGASESSLSDLTKTGFGRLSPQPTQEISEQSLFGSGFEVPPPEQSRDFQF
GPSSQTGQPSAPADPVFGSSTAGFGARPMMASQAMGGSLFGSGFGAPPSEQSRGFRFGPS
QRGQPSAPAGPVFGSSTAGFGARPMMASQAMGGSLFGSGFGAPPSEQSKGFGFGSSLPMV
QSSAPPVPMFGSSAGFGVPQQAAMGGSLFGSGYGAPPLEQLNGFGFGSSMEQPSPPGASS
FGSSPAGFGVQQQTFGGSLFGSGGRAMPQIYSLQSDMSSSGFGFGVPRNRSQPASPPPPP
AAPPLPPPPPVGQSRGIGFEVSPRNEMIPCGPEIISRMQGATEGGLPPAAPPPPPPLHPQ
SSPPAPSPPAPLHSSLLRTQFMPPPPQSSPPHPPKPRQLLQQQIQRGKILKKASPIIRPA
SFCANIALSEPILESQQEITPLLDLEVDELLPDLYQRRLAAPPSPPPISRKKSESPTPLS
QQSESDSVRAVKPRLKKKKLKKEFTMARDAEISDAISYTEEEQDAKKKPSGEFILKQYLA
SPDRKARGRSMVRRSFTGKPKQSSSENEMTTLLLLDVTPLPLGVEDADGNFIEIVPRNTT
IPCRKSQAFTCTDADQTMADIRVYEGCYKEAKKNNFLGNLQIENIGGTTVGSTWVTVTID
IDANGIVTVTVNDLESVSLGSFTVNAEKRKLSREQIENMIENADNVQFPGKISPRRFRLP
ALPSGLTEKALDDINSYGIGTSVSNIRKRSPNLSLSSLRSVFNIQQNNLWKLDESLEETF
GIDTKKCRDILQRAGLHSLGQKVSEESIEILSSALALVLIYKVIAPELFPMDFSNPITIA
TAFLMGAKKLDGMTAVGDILPLLKKSVDTYIAKRQKYDWVCSMLELGHSWEEAACKMLGY
TQSSVRDPGPVYIPVM
NT seq
7251 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgtgttggcagggtgccagatcgtcctggacctcagcaccagtgtcggcttc
aagaagaaacaggaagtcaggagtaccatcacacaaaatggaggagtcatctcctacata
gtaaccaagaagagtacccatgttgtgctgaatgatgcagagaaagcagacgtcagctat
aaatgtaaaattgccgcaaagttccgcatccctgtggtttcgctggattttatttttgac
tgtatcagtcaagggaagctactggacacagacaattaccttctggtcgggaaaacaaaa
gcacaggaattcagctcaggcaaaatatcagctgggaaatctgagttgaggtcagatgga
aagaaaaagaaaactatttctacttttaacccaaagtctgtgaaagcatggaaggagaaa
gacaaaaacatgccagcatttgacgaagaaagcgaggttgcgaagtttgccatgtttcag
aaatatgacaagaaatcaaacagcacacagtttggtgttttagagattcacgctctcacc
agagttactgcctttgacaacaaggaccccccaccgagattctgcgtttgttctcactcc
ggaagtgtagaggatttacaggataaaggagacggtggaagcaaggagtaccgcttcgtg
cagacgtcagaggaggccctgagtgtgtacagcgccctctataaacagatgaaggatccc
ccgagtagcatgaatgtctgtcacaaacctccctgtcagaatattggaaccaaacagttc
cagaagctgatactggagtatgggatggaagagacagagttgtctgcccctgtggcagag
ttgatgcagcacatttggcgggaggcagggggagagatcgagcaagtcctgagtagtcca
ctgcagtccatcaaactggaccaggttgagaaggctacagccattttgacccacatgaag
gagagccaatcagacaacagcaaactccaggctctgtttgatgagttctacacggccctc
cctcaccgacctcaatacaggacaaccagcttctccatgtcatggctggccaggaaactt
gacctatgtcagctaatcaaggacgtagtgtcagtaagtgaggccacgaattggtcgacg
cgaggcaatgccgaggctcagtacaaggccctcagatgtcagatatcccacgtatcagga
ggcctacccagacaggtcctagatatcctcaacctgaaacaaggggaagaaatgagaatt
cagaatgtatatgccatacatcggccctcagagagtgagaaattccgctcagacctgagt
tccaggccgctgtttcatgcctccaatgcagaaaactttgttggaattctttccagaggt
ctcctaatgccaaaggtcgtcgttgatgactacggaggaaagagaactgatccaggaatg
ctgggacatgggatctattttgcaagctctgcaagtacgagcataaaatactcgaaacca
agtaaaaccagaaacacacggatgatgcttgtcagccaggtggcactaggaaccacactg
gacgtgtacaaacatcagcgggacctaacagaaccacccagtggctaccatagtgtccat
ggggtggctgccacagagggggtggagtctgagttccaggatgatgagtttgttgtgtac
aacacagaccaacaaatgctgagttatctcgttgagttcaccattggcagtgagattcct
gtggagatatctgttgaaaaagaggctttagaaagggaggaaactttgtcagagagcagt
attgacatcagcgacgtacatgatgtcacagacccattgacaaaggtcaaggccggcttg
gtttccaatgacgacaccccagttactctacttgaagcccatatacgagctaaattgatt
gatctggccggggaggtggtggtgttacaagagtaccacaacaacagtgaccaggccctg
gaggctaagtacgtcttcccgctggatgacatggccgccgtgtgcggttttgaggcgttc
atcaacgggaaacacattgttggggaggtgaaggagaaagagacagcccaccgggaatac
aagcgggccgtccaggaggggcatggggcgtacctcatggaccaggacgaggaaacgccg
gaggtattcacggtcagcgtggggaacctccccccgggggctgtggtggtcatcaagatc
acctatgtcacagagctacaggtggacggtgacctcatcaacttccgtctcccaggcagc
gtggcgccatggaaacaaaaatatgttgacgcaccggaattcaaagacaaggactgggat
acagtacaggtgggaaacacctgctgcagtgtacaggtgtatgtagacatgccctttgac
atccggagtctggagtgtcccacgcataaagtactctccaagagaacggccactaaggct
gtggtggaaattccagacgagtcagaccagacattggaggatggattccagcttctgatt
ggtttagcagaaatccacgttccgcggatgtgggtcgagtcggatgaaggagagtcgcag
gcatgcatgttgaccttttaccctgagtttgaggctgatgaggagtcagaggttgaggtc
atcctgatgattgacagctccaactccatgaaggactcctcccaccgtgatgccaaaaag
gctgctctccttgtgttacatctcatggatccaacatggaggttcaatgtggtctcattc
gggacagcattcacagaacttttcccattgagtcaaccagccagtaaattcaatgtacag
acagcaaagcagcatattcagaaattacaagcaaaccagggtaatactgaactctacaga
cccttacactcttactaccttcttaaaccagagagttccaccaggaatatttttcttttc
tctgatggctatatcaacaatgatgaggataccctggccaaagtttcccagaattctcaa
cacacaaggatcttcaccatgggaatcagctctgtagcaaaccgtcatcttctgaaagca
atatccagggttggagcaggttcctatgaattctatgattccaagttcaaatctaagtgg
gaagataaggttaggtcccagttacagaaagcggcccagccggtgcttacctcagtatcg
gtagactggcgccatgacgaccagcaccccgcaccaatacaagctccggaacaaatcacc
gctctgttcagcagctcacgccaagtgatctacggattcgtggacaactgctacatggct
actttaaaagcaaagattggtggtcaggagatatctactgttgtctcgacctctgacctc
agtgttactaagggcaagatgctgcacagattaactgccaagggagtgatccgagattgg
gaggatggagttctctcccctgataggaccagtcatgaggttaagaagatgaacctgaaa
caatatgtcatcgagctgagcaagaggtactccattgtgacctcactgaccagctttgta
gccattgaaaaacgagaaaaggatgaggttatcccagattctttcccagatgttggggat
ttactgatcaaagaggatgtagatatgctgaaatacctttcctgggacaatgaggcagat
acaacttcctatgaagaggacacatcatcagaagaaggcacatcatcaggagatgaagaa
gaagaagaaaaagaagaatatgcagaggaattgtattcattagaatgcatggtaaattat
gagatggaagaagtgggagattcctatgaagaattttttgacggaggaggaggtggagga
ggaacagagaaaattgaaagtactgagggttgttcaatgttgtctgatgatgatgaagaa
gacgaccttcaacccatagtgatggacatgggctctctcttcatgaaggcggggtttgct
ggcgacgacacccctcgggccgagtttgagaccacggtagggcgacccaggcaccagggg
gtcatggtgggcatgggacagaaggatgcctatgttggaaaggaggccacaggttccaaa
cctatagctgggaaagttttaaaaggaaagtcaccagctgataaggcccaagataaagta
gtgttgcttggcaaaatgtcatcagaaaggacgaaaaagaagctagctggtaaagaaaaa
agttacagtaaagtttgcagtagtgatgaatcggatgttgatgatctcggatttaatttg
tttggtgacgacgatgacgatgacgactatgagaggccgcaaagttttaaatctacaggc
aagatatctagtataattggacaaccactgtctgcaaaaaatttaagagtggatactttt
aagccaccagaggtacaactccaatcagctccttcttcaatgtctggattggcattaccc
ggtgtgatgagagggggcgtttcttccagaaaggtacatggaaatgtgtctaaaggagca
gttccagcagagaaatccaaaggagttggttatggggcatctgaaagctctttatctgat
ctaacaaaaacaggatttggaaggctgtcaccacagccaacacaagaaatatctgaacaa
tcattatttggatcaggatttgaagtacctccaccggaacaatcaagagattttcaattt
ggtccatcatcacaaacaggtcagccatcagcacctgctgacccagtgtttggatcatca
acagcaggattcggagcacgaccaatgatggcatcacaggctatgggaggatcattattt
ggatcaggatttggagcacctccatcggaacaatcaagaggttttcgattcggtccatca
caaagaggtcagccatcagcaccggctggcccagtgtttggatcatcaacagcaggattc
ggagcacgaccaatgatggcatcacaggctatgggaggatcgttatttggatcaggattt
ggagcacctccatcggaacaatcaaaaggatttggatttggctcctcattacccatggta
cagtcatcagcacctcctgtcccaatgtttggatcatcagcaggatttggagtaccacaa
caggctgctatgggtggatcgttatttggatcaggatatggagcacctccattggaacaa
ttaaatggattcggatttggttcatcaatggaacagccatcgccacctggtgcttcatca
tttgggtcctcaccagcaggatttggagtacagcaacagacttttggaggatcattattt
ggatcaggaggcagagcaatgccacaaatatattcactacagtctgatatgtcttcaagt
ggttttgggtttggagtacctagaaatagatcacaaccagcttctcctcctcctccacca
gccgctcctccactacctcctccaccaccagtaggacagtccagagggattggctttgag
gtatcaccaagaaacgaaatgattccatgtggacctgaaattatatctagaatgcaagga
gcaacagaaggagggctgccaccagccgctcctcctccacctccaccactgcatccacag
tcatcaccaccagcgccttctccacctgcacctttgcattcttcacttctgcgtacacaa
tttatgcctccaccgccacagtcttctccaccacatccaccaaaaccacgtcaattattg
caacaacaaatacaacgtggaaaaatactaaaaaaagcaagcccgatcatacgccctgct
tctttttgtgcaaatatagcactatctgagccaatactagaaagccaacaggaaattacc
ccattattagatcttgaagttgatgaacttttacctgatttataccagagacgtttggca
gcacctccatctcccccgccaatttcaagaaaaaagtcggaatcacctacaccattaagt
caacagtctgagagtgattcagtgagggctgtaaaacctcgattaaaaaaaaaaaagctg
aaaaaagaattcacaatggcacgtgatgcagaaatttcagatgcaatttcatatacagag
gaagagcaagatgcaaagaaaaaaccatctggagagttcatcttaaaacagtacttagca
tcccctgatcggaaagctagaggtcgttcaatggtgaggcggtcatttacaggaaagccg
aaacaatcatctagtgagaatgaaatgacaacactgcttttactggatgtcaccccttta
cctcttggtgtggaggatgcagatggcaattttattgaaattgttccccgaaacaccacc
ataccttgcagaaaaagccaggctttcacatgtactgatgctgatcagactatggctgat
attcgagtatatgagggctgttataaagaggccaaaaagaacaacttcctgggaaatcta
cagattgaaaatattggaggcacgactgtgggcagcacttgggtcactgttaccatcgac
attgatgcaaacggtatagtgactgtgactgtaaatgacttagaatcagtcagcctgggt
tcatttactgtaaatgcagaaaagagaaaactgagccgggaacaaatagaaaatatgatt
gagaatgcagataatgtccagtttccaggcaagatttcaccaagaagattccgactacca
gcattaccaagtggactgacagaaaaagctctggacgacatcaacagctatggtataggg
acgtcagttagtaacatcaggaagaggtcccccaacctcagcctctcctctctcagatct
gtgttcaatatacaacagaacaacttatggaaacttgatgagagtttggaggaaactttt
ggaattgatacaaaaaaatgcagggacattcttcaaagagcaggtttgcactcgctaggt
caaaaagtctctgaggaaagcattgaaatcctctcctctgcactggccctggtcctcatt
tacaaagtgattgccccagagttattccccatggatttttccaatccaattacgattgcg
acagcgttcctaatgggagccaaaaagctggatggaatgacagccgtgggcgacattttg
ccgttactgaagaaatcagtggacacgtacatagccaagaggcagaaatacgactgggtg
tgcagcatgctggaattaggtcactcttgggaggaagcggcctgtaagatgctggggtat
acacaatcctctgtaagggacccaggacctgtgtacatacccgttatgtaa
DBGET
integrated database retrieval system
