Caldilinea aerophila: CLDAP_34260
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Entry
CLDAP_34260 CDS
T01797
Name
(GenBank) putative major facilitator superfamily transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
cap
Caldilinea aerophila
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cap02000
]
CLDAP_34260
01504 Antimicrobial resistance genes [BR:
cap01504
]
CLDAP_34260
Transporters [BR:
cap02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
CLDAP_34260
Antimicrobial resistance genes [BR:
cap01504
]
Gene variants
Tetracycline resistance genes
Transporters
CLDAP_34260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_2
EMP70
Motif
Other DBs
NCBI-ProteinID:
BAM01466
UniProt:
I0I878
LinkDB
All DBs
Position
complement(4265754..4266917)
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AA seq
387 aa
AA seq
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MTAKLLVDIGSQIFNPFLPVIAAGLGMSVVDLGRLVGLRSAMGIFAPVSGALADRRGYRP
VIRSALLMSAAGFLLLGMSSAPWMVALAMILSGLGIGAFVPNLQAFVSSRLPYSLRARGL
GMIEYSWALTGILGLSLIGALIAATNWRVPFFLLAAGMTGMSFVFSAMPAASRPRPKEAD
SSEARRSWRRQVIDLFVIPTNPRSAYATILAGALSYFAAMQVMIAHGAWLVRDYQLDAAA
LGMVAFVFGWFDLTASVSVSLFTDRIGKKRSVLIGILGSLVGYLLMPFLNIGVIPAVAII
GIARMFFEFNIVSHFPLLSEQAPEQRGRVMTLGAAASLVGATAAGFTGPWLLVHAGVQAL
AWSAAAIVTASLLIMLFLVQERPGSAG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaagctgcttgttgacattggctcgcagatttttaatccttttcttccggtg
attgcagctggattgggaatgagcgtcgtcgatctggggcggctggtggggttgcgcagc
gccatgggtatcttcgctccggtgagcggcgcgctggcggatcgtcgcggctaccggccg
gtcatccgcagtgcattgctgatgagcgccgccggctttctgctgcttgggatgagcagt
gcaccgtggatggtcgccctggcgatgattctctccggcctgggtatcggcgcctttgtg
ccaaaccttcaggcgtttgtcagcagccgcctgccctattccctgcgcgctcgcgggctg
gggatgatcgaatactcctgggcgttgaccgggatcctcggcctatccctgatcggtgcg
ttgattgcagcgacaaactggcgtgtccctttctttctgctggctgccggtatgacaggc
atgagcttcgtatttagcgcaatgcctgcggcttcacgccctcgaccgaaggaggccgat
tcaagcgaagcgcgcagaagttggcgccggcaagtgatcgacctcttcgtgattcccacc
aacccgcgctctgcctacgccaccattctggccggtgcgctcagttacttcgctgccatg
caggtgatgatcgcacacggcgcatggttggtgcgggattatcaactcgacgcagcggcc
ctgggcatggtggctttcgtcttcggatggttcgatctgaccgccagcgtctcggtcagc
ctttttaccgaccgcatcggcaaaaagcgcagcgtgctgatcggcatccttggctcgctg
gttggatatctgctgatgccgtttctgaacatcggcgtcattcctgccgtcgccatcatc
ggaatcgcccgcatgttcttcgagtttaacatcgtcagccactttcctttgctcagcgaa
caggcgccagagcagcgggggcgggtgatgacgctcggcgctgctgcatcgctggtgggc
gccacggcggcgggctttactggcccctggctgcttgtgcatgcaggggtacaggcgctg
gcgtggtcagcagcagcgatcgttacggcttcgttgttgattatgctgtttctggttcag
gaacgcccaggaagcgcaggatga
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