Capnocytophaga endodontalis: CBG49_03845
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Entry
CBG49_03845 CDS
T04940
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
capn
Capnocytophaga endodontalis
Brite
KEGG Orthology (KO) [BR:
capn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
capn03009
]
CBG49_03845 (rimO)
Enzymes [BR:
capn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CBG49_03845 (rimO)
Ribosome biogenesis [BR:
capn03009
]
Prokaryotic type
ribosomal protein modification factors
CBG49_03845 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
CCDC22_CC
Motif
Other DBs
NCBI-ProteinID:
ASF42286
UniProt:
A0A1Z4BLX0
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All DBs
Position
804446..805756
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AA seq
436 aa
AA seq
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MRTRSIKKNTINVVTLGCSKNVYDSEVLMGQLKAGGKEVVHEKEGNIVVINTCGFINNAK
EESINTILDYVQQKEAGLVDKVFVMGCLSERYKPDLEKEIPDVDQYFGTSELPALLKVLG
ADYKHELIGERLTTTPKNYAYLKISEGCDRPCSFCAIPLMRGAHISTPIDDLVTEAEKLA
AKGVKELILIAQDITYYGLDLYKKRALADLLRALVKVEGIEWIRIHYAFPTGFPMDVLEV
MKTEPKICNYLDIPLQHISDKILTSMKRGTTQEKTTKLLKKFREAVPEMAIRTTLIVGYP
GETEEDFQKLKDFVKAMRFDRLGCFTYSHEENTTAYELTDDVPEEVKLQRANEIMELQSQ
ISWELNQEKVGKTFRCLIDRKEGNYFVGRTEYDSPDVDNEVLINAKKHYVKIGDFTDVKI
IEAADYDLYGEPVAIC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacaagatcaataaaaaagaatactatcaatgtggtaacccttggttgctctaaa
aacgtgtatgacagcgaagtgctaatggggcagttaaaggctggtggtaaggaagtagta
cacgaaaaagaaggtaacatagtggttatcaacacttgtgggtttatcaacaacgccaaa
gaagagagcatcaacactatattggactatgtacaacaaaaggaagcaggattagtggat
aaagtctttgtaatgggttgcctctccgaacgttataaacccgatttagaaaaagaaatc
cccgatgtcgatcaatattttggaactagtgaattgcccgctctgctcaaagttctcggc
gccgactataaacacgaactcataggtgaacgactcaccactacacctaaaaattacgca
tatcttaaaatatccgaaggatgcgaccgcccttgcagtttttgtgctataccactaatg
cgtggcgctcatatctctacccccattgacgatttggtaaccgaagccgaaaaactcgcc
gccaaaggggtgaaggaactcattctcatcgctcaagatatcacttattacggcttagac
ctttataaaaaacgcgctcttgccgacctattgcgcgccttggtaaaagttgaagggatt
gagtggatacgcattcactacgccttccccacaggcttcccgatggacgtgcttgaggtg
atgaaaaccgagcctaagatatgtaattatttagatatcccactgcaacacatttccgat
aagattctcaccagtatgaaacgcggtaccacccaagagaagactaccaagctcctcaaa
aaattccgcgaagcagtccccgaaatggcaatccgcacaaccctaattgtaggttaccct
ggcgaaaccgaagaagatttccaaaaactaaaagattttgttaaagcaatgcgttttgat
cgccttggttgttttacctatagtcacgaagagaataccacagcctacgagttaaccgac
gatgtccccgaagaagtaaaactacaacgtgccaatgaaattatggaattacaatcgcaa
atatcgtgggaattaaaccaagagaaagtaggtaaaaccttccgttgcctcatcgaccgt
aaagaaggcaactatttcgtaggacgcaccgaatacgactcccccgatgtcgacaacgag
gtactcatcaacgctaaaaaacactatgttaaaataggcgattttactgatgtgaagatt
atagaggctgccgactacgatttgtacggagagcccgtcgcaatttgttaa
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