Capnocytophaga sp. H2931: CGC52_07750
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Entry
CGC52_07750 CDS
T05889
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
capq
Capnocytophaga sp. H2931
Pathway
capq03030
DNA replication
capq03410
Base excision repair
capq03420
Nucleotide excision repair
capq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC52_07750
03410 Base excision repair
CGC52_07750
03420 Nucleotide excision repair
CGC52_07750
03440 Homologous recombination
CGC52_07750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capq03032
]
CGC52_07750
03400 DNA repair and recombination proteins [BR:
capq03400
]
CGC52_07750
Enzymes [BR:
capq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC52_07750
DNA replication proteins [BR:
capq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CGC52_07750
DNA repair and recombination proteins [BR:
capq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CGC52_07750
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGC52_07750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
DUF1198
HHH_5
HHH
Pro-kuma_activ
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ATA75313
LinkDB
All DBs
Position
1797670..1800474
Genome browser
AA seq
934 aa
AA seq
DB search
MSKKRLFLLDAYALIFRGYYAFIKNPRVNSKGLNTSAILGFMNSLFDVIKKERPDHLAVA
FDKGGSVDRLELFTDYKANRDETPEAIRIAVPYIQQILRALHIPIIEKEGYEADDIIGTL
AKQAEKQDYQVFMVTPDKDYAQLVSENIFVYRPARMGNDVEIWGVDQVREKFEVERPDQV
IDFLGMMGDAVDNIPGLPGVGEKTAKKLLADFGSMENLLANTDKLKGKLRENIEKNAEKG
LLSKKLATIILDVPVQFDETDFELSQPDMEAVTKIFEELEFRQLLQNLIKTYQTTASATK
QIEAPSDLFSSETAPVVVQGNLFATEHISERKNIQNTPHFYQLVDTPMACKILIQNILQQ
KEVCFDTETTNLDSLEAELVGIAFSWSAGKGYYVPFPENQQQTSKQLEIFRPFFENEHIT
KVGQNLKYDIKVLHNYGVEVKGLIFDTMIAHYLINPDMRHNMDVLAETYLNYTPVSIESL
IGKKGKNQLSMRQVSLHDQKEYAVEDADITWQLKEVFEEKLKSSKVDELYYNLEAPLIQV
LTKMELEGIRLDTDFLKELSAGLDDDIATLEKAIATEAGEEFNLASPKQLGDILFEKLKI
AKNPKKTKTGQYATSEEVLSAFADKHLIVSNILEWRQLQKLKSTYVDSLPNEVNPKTGRV
HTTYMQSVAATGRLSSNNPNLQNIPIRTERGQQVRKAFVPRDEQHVLLAADYSQIELRII
AALSEEQNMIQAFLNKEDIHRSTAAKVFNVPIEAVTREQRSHAKTVNFGIIYGVSAFGLS
NQTDLSRTESKELIETYYATYPNLRAYINKQIFFAQQHGYVETVLGRRRYLPDIHSRNQV
VRGAAERNAINAPIQGSAADIIKIAMIRIQNRLEKEQFRTKMLLQVHDELVFDVPLDELE
AVKSAIQYEMENAFSLTVPLVVDLGVGKNWLEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaaaagactatttctattagatgcttatgcgttgattttcagaggatattac
gcatttatcaaaaatccacgagtcaattccaaagggctcaacacctcagctattttgggg
tttatgaactcgttgtttgatgttataaaaaaagagcgtccagaccatctggcggtggca
ttcgacaaaggaggaagtgtcgaccggttggaattatttacggactataaagccaatcgg
gatgaaacccctgaggctattcgtatagcagtgccttatattcaacagattttgagagct
ttgcacattcccatcatcgaaaaagaaggttatgaagccgatgatattattggaaccctt
gctaaacaagccgaaaaacaagattatcaggtgtttatggttactcccgataaagattat
gctcagttagtttctgagaatatattcgtatatcgccctgctcggatgggaaatgatgtc
gaaatttggggtgttgaccaagtaagagaaaaatttgaggtagaacgtccagatcaggtg
attgattttttaggaatgatgggagatgccgtcgataacataccaggattgcctggagtt
ggtgagaaaaccgcaaagaaacttcttgctgactttggtagtatggaaaacttactcgct
aataccgataaactcaaagggaaactgcgtgaaaatatcgaaaaaaatgcagaaaaagga
ctgctttccaaaaaattagcaaccattattttggatgttccagttcaatttgatgaaacc
gattttgaactgtcgcaacccgatatggaggctgttaccaaaatttttgaagagctcgaa
ttccgacaactgcttcagaatcttatcaaaacttaccagaccacagcttcagcaacaaag
caaatcgaagctccgtctgatttattttcttcggaaacagcccctgtagttgtgcaaggt
aatttgtttgcaactgagcatatttctgaaagaaaaaacatacaaaacacaccacatttt
tatcagttggtagatactccaatggcatgtaaaattcttattcagaatatattacaacag
aaagaagtctgttttgacacagaaaccacgaatcttgatagcttggaagctgaattggtt
ggtattgctttctcatggagtgcaggaaagggttattacgtacctttccctgagaatcaa
caacaaacgagcaaacaactcgaaattttccgaccattctttgaaaatgagcatattacg
aaagtaggccaaaatctgaaatatgatatcaaagtattacacaattatggagtagaagtt
aaaggattgattttcgatactatgattgctcattacctcatcaatccagatatgaggcac
aatatggatgtgttggcggaaacgtatttgaactatacccctgtctccatagaaagtctt
atcggaaaaaaaggtaagaatcagttgtcgatgcgtcaagtgtcgcttcatgaccaaaag
gaatatgctgttgaagatgctgacatcacatggcaacttaaggaagtttttgaagaaaag
ttgaaatcatcgaaggttgatgaattatattataatttggaagctcctttaattcaggtt
cttacgaaaatggaacttgaaggtattcgtttggatactgattttctcaaagagttatca
gcaggattggacgacgatatagctactttagaaaaagccattgctactgaagcaggggag
gagttcaatttggcatctcccaagcaattgggggatattctgttcgaaaaattgaaaatt
gctaaaaatcctaaaaagaccaaaacagggcaatatgccacttccgaagaggtactttca
gcatttgcagataaacatttgattgtttctaatatattagaatggaggcagttacagaaa
ttaaagtctacttatgtagatagtttacctaacgaggtaaatcccaaaacagggcgtgtc
catacaacctacatgcaaagcgttgcagctactggacgattgagtagtaataatccaaat
ttacaaaacatcccaattcgtactgaacgaggacagcaagtacgtaaggcatttgtacct
cgtgatgaacaacatgtactactcgctgcggattattcgcaaattgaattacggataatt
gctgcactaagtgaagagcaaaatatgattcaagcattcttaaacaaggaagatattcat
cgctccaccgcagctaaagtgtttaatgttcctattgaagccgttacacgcgaacaacgt
agccatgctaaaaccgtgaattttgggattatctatggagtttctgcctttggacttagc
aaccaaacggacctttcacgtaccgaaagtaaggaactcatagaaacttattatgctaca
tatccaaatttacgagcgtatatcaacaaacaaatattttttgctcagcaacatggttat
gttgagacagtgttgggacgaagacgctatctaccagatattcattcacgtaatcaggtg
gttagaggagctgctgagcggaacgccatcaatgctccaattcaaggaagtgccgccgat
attattaaaattgcgatgattcgtattcaaaaccgtttggaaaaagagcaatttcgaacc
aaaatgcttttgcaagtgcatgatgagttggtattcgatgttcccttagacgaactggaa
gccgttaaaagtgctatccaatacgaaatggaaaatgctttttcacttactgttcctttg
gtagtcgatttgggagtaggtaaaaattggttagaggctcattaa
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