Caproiciproducens sp. NJN-50: EQM14_08135
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Entry
EQM14_08135 CDS
T05807
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
capr
Caproiciproducens sp. NJN-50
Pathway
capr03030
DNA replication
capr03430
Mismatch repair
capr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EQM14_08135
03430 Mismatch repair
EQM14_08135
03440 Homologous recombination
EQM14_08135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capr03032
]
EQM14_08135
03400 DNA repair and recombination proteins [BR:
capr03400
]
EQM14_08135
Enzymes [BR:
capr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EQM14_08135
DNA replication proteins [BR:
capr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EQM14_08135
DNA repair and recombination proteins [BR:
capr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EQM14_08135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
RNase_H_2
DNA_pol3_a_NII
tRNA_anti-codon
DEDDh_C
RUBY_RBDX
CARD
Zn-ribbon_8
DNA_pol_B_exo1
Motif
Other DBs
NCBI-ProteinID:
QAT51280
UniProt:
A0A410Q7S0
LinkDB
All DBs
Position
complement(1691771..1696078)
Genome browser
AA seq
1435 aa
AA seq
DB search
MDVSRLPEPVREGAIASLQIDSAVRTLTANVLFPALVERNVLDHVERSIVSCKPLRLSKA
CVKPTFPQASFSTDYYPSLIAELKRREASLNGTFTDSIAELKDGRLLITLKHGGGEILKT
RRVDRLLSGLIREEFGLSLAVEFGGVLAAEPGAAAFINRKIVREEARRREEITENVDSAE
RSLQQKTTPKTISVREGETLYPTIIPDSAREIYGHLPRAKPIPISKITPDIGSATIWGEI
FSVDQKATRDRQRKIYSVNVTDYTGSITLKIIEMATQCKMLDTLAKGMSVLVRGDVEYDK
YDHEIVLRPKSIATVRQVEVMDDAQEKRVELHLHSNMSAMDGVNSVSDLIRRAAKWGHKA
VAVTDHGVVQAFPDAMNTAEELKKKDQPIKILYGTEAYFVNDLVPAVKGSDNRELSGEFI
SFDIETTGLSPNADRITEIGAVRIVDGEVKDSFDTFVNPERGIPAKITELTGITDQMVRD
APSESQALRQFFEFCGKDAVLIAHNADFDTSFIRIAAGRSGFEFENTYIDTVPMCRSLLK
GIKNAKLDTVAKYLKLDPFNHHRACDDAAVLGQIFLRLVQQLKEDTGAKTVQDINSCLAG
GDIKKMKSYHMILLAKNQTGLKNLYKLISKSHLDYFYRNPRIPKSELLKYREGLIVGSAC
EAGELYRAISGAQPWSALCEIASFYDYLEIQPIGNNRFMVREGLVPDEEKIREFNRTVVR
LGEKLNLPVVATCDVHFMDPKDGDYRKILMQGLGFKDTDEQAPLYFRTTKEMLREFSYLG
KEKAYEVVVTNPNRIADGIEEIRPIPEGTFPPFIEGAEEQLTEISWTRAKELYGDPLPEL
VQKRLERELGSITKHGFSILYMIAQKLVADSVAHGYLVGSRGSVGSSFVANLAGISEVNP
LDPHYVCPNCKHSEFITDGSIGSGFDLPPKKCPVCGAEYSRDGHTIPFETFLGFDGDKTP
DIDLNFSGEYQSSAHRYTETLFGKDHVFKAGTIATVADKTALGFVKKYEEEKGLVLHRAE
ELRLAAGCTGVKRTTGQHPGGMVVVPKGKEVFDFCPVQHPANDQNSDSITTHFDFHSIHD
TICKLDELGHDVPTIYRYLEDYTGIPVMDVSMSDPQVMSLFTSTEALGVKPEDIDSQTGT
FSLPEVGTSFVRQMLLDSNPKTFSDLLQISGLSHGTDVWLGNAQELIKNGTCTISEVIGT
RDSIMTYLLHKGLEPKMAFKIMEITRKGKAPKLLTEDYIQAMKDHGVPQWYIDSCMKIKY
MFPKAHAAAYMISTLRLGWYKVHRPVEYYAAYFTVRGEDFDGALVMQGREAVRRKMSEIA
MKGKEASAKEESAYSTLQIVNEMLARKIEVLPLDLHRSDAKKFLVEDGKIRLPFLSLSGV
GEAAANSLAEAGKKGPYISVDDLQGRSKVSKSVIETFETAGVLKDLPKSSQMSLF
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atagatgtttcacggctgccggaaccggtccgcgaaggggcgatcgcttccctccagatt
gattcggccgtcaggacgctcacggccaacgtcctttttccggccttggtggagcggaac
gtactggaccatgtggaacgcagcattgtttcctgcaagccgctccggctctccaaagcc
tgcgtgaaaccaacctttccgcaggcttctttttcaaccgattattatccgagcttgatt
gccgaattgaaacgccgggaggcgagcctgaacggaacttttacggattccattgcggaa
ctgaaagatggcaggcttctgatcactttaaaacacggcggcggagagattctgaagacc
cgccgcgtggatcggcttctttccggactgatccgcgaggagttcggactcagccttgcc
gttgaattcggcggtgttctggcggctgaaccgggggccgccgcgttcatcaatcggaag
atcgtgagggaagaggcgcgccgcagggaagagattacagaaaatgtggattcggcggag
cgttcccttcagcaaaaaacgaccccaaaaaccatcagcgtaagggaaggggaaaccctt
tatccgaccatcattccggacagcgccagggaaatttacggacatctgccgcgcgccaag
ccgatcccgatttccaaaatcacgcccgatatcggaagcgccaccatctggggcgaaatc
ttttccgtcgatcagaaggcgacccgggacaggcagcggaaaatttattccgtcaacgtg
acggattacaccggttccattacgctgaagatcatcgagatggcgacccaatgcaaaatg
ctggacacgctggccaaagggatgtccgttttagttcgcggagatgtggaatacgataaa
tacgaccatgagatcgtcctccggcccaagagcatcgcgacggtcaggcaggtggaagtg
atggatgacgcgcaggaaaagcgcgtggaactgcatcttcactccaacatgtccgcaatg
gacggggtcaactccgtgtccgatctgatccgccgggcggcaaaatgggggcataaggcc
gtcgccgtgaccgaccacggcgttgtgcaggcgtttccggatgcgatgaacaccgcggag
gaattgaaaaagaaagatcagccgatcaaaattctctacggcacggaagcctattttgtc
aacgatctggtgccggccgtcaagggcagcgacaaccgggagctttcgggcgaattcatt
tccttcgatattgaaacgacgggactgagccctaacgccgaccgcattacagaaatcggc
gcggtccgcatcgtggacggagaagtcaaagattccttcgacacgtttgtcaatccggaa
cgcggcatccccgcgaaaatcacggagctgaccggaattacggatcaaatggtgcgggac
gctccgtcggagtcccaggctctgcggcaattttttgaattctgcggaaaagacgcggtg
ctgattgcccacaacgcggatttcgacacatcctttatccggattgccgccgggcggagc
ggatttgaatttgagaacacctacatagacaccgttccgatgtgccgctcccttttaaag
gggatcaaaaacgcgaagctggacaccgtcgcgaaatatctgaagctcgacccgttcaac
caccaccgcgcctgtgacgacgccgcggtgctcgggcagatttttttaaggctggttcag
cagctcaaagaggataccggcgcgaaaacggtgcaggatatcaatagctgccttgccggc
ggggatatcaaaaaaatgaaatcctaccatatgattctgctggcaaaaaaccagacaggc
cttaaaaatctatacaagctgatttccaaatcacacctggattatttttatcgaaatccc
cggattccgaagtctgaattattgaaataccgtgagggccttatagtcggcagcgcctgt
gaagccggtgagctttacagagcgatttccggcgcgcagccgtggtccgccctgtgcgaa
atcgcgtcgttttacgattatctggaaattcagccgatcgggaacaaccggttcatggtg
cgggaagggctggttccggacgaggagaaaatccgtgaattcaaccgcacggtggtcagg
ctgggcgaaaagctgaatctgcccgtcgtcgcgacctgcgacgttcatttcatggacccg
aaggacggggactaccgcaaaatcctgatgcagggcctcggcttcaaagatacggatgag
caggctccgctttatttcaggaccacaaaggaaatgctgcgggagttttcctatctgggc
aaggaaaaggcatatgaggtcgtcgtgacgaatccaaaccggatcgcggatgggatcgag
gaaatccggccgattccggaggggacttttcccccgttcatcgagggcgcggaggagcag
ctcactgaaatttcctggacgcgcgccaaggaactgtacggcgatccgctgcccgaactg
gtccaaaagcggctggagcgggaactcggttccatcacgaagcacggcttttccatcctg
tatatgatcgcgcagaagctggttgcggattccgttgcgcacggatatctggtcggctcg
cgcggctcggtcggctcttccttcgtcgcgaatctggcgggaatctccgaagtgaatccg
ctggacccgcactatgtctgcccgaactgcaaacacagcgagttcatcaccgacggcagc
atcggcagcggcttcgaccttccgccgaagaagtgccccgtctgcggagcggagtatagc
cgggacggccatacgatcccgttcgagacctttctcgggttcgacggggacaagaccccc
gatatcgatctgaatttttccggcgaatatcagtcgagcgcccaccgctacacggagacg
ctgttcggcaaagaccatgtgttcaaagccggaacgatcgcgacggtggccgacaagaca
gcgctcggttttgtcaagaaatacgaggaggaaaaggggctggtgctgcaccgtgcggag
gaactgcgcctcgcggcgggctgcaccggcgtcaagcgcaccacgggccagcacccgggg
ggcatggtcgttgtgccgaagggcaaggaagtttttgatttctgcccggtgcagcacccg
gccaacgaccagaactccgacagcatcacgacgcatttcgacttccattccatccacgac
accatctgcaagctggacgagctcggacacgatgttccgaccatttaccgctatctggag
gattacaccggcattcccgtgatggacgtttccatgagcgacccgcaggtgatgtccctg
ttcacctccacggaagcgctcggcgtgaagccggaggatatcgattcccagaccggcacg
ttttcgctgcctgaagtcggcaccagctttgtccgccagatgctgctcgactccaatccg
aagactttctccgaccttcttcagatttcagggctgtcccacggcacggatgtctggctc
ggcaacgcgcaggaactgatcaagaacgggacctgcacgatttcggaggtcatcggaacg
cgcgacagcatcatgacatatctgctccataaagggctggaaccgaaaatggcgttcaag
atcatggagatcacccgaaagggcaaggcgccgaagctgctgaccgaggactacattcag
gccatgaaagatcacggcgtgccccagtggtacatcgactcctgcatgaagatcaagtac
atgttccccaaggctcacgccgcggcctacatgatttcgacccttcggcttggatggtac
aaggtccaccgcccggtggaatactatgccgcttacttcaccgtgcgcggcgaggatttc
gacggcgcgctcgtgatgcagggcagggaggcggtgcggcgaaaaatgagcgaaatcgcc
atgaagggcaaagaagcctccgccaaggaggaatccgcctattccacgctgcagatcgtc
aatgagatgctggccaggaaaatcgaagtccttccgcttgacttgcaccggtctgacgcg
aagaagtttctggtggaggacggaaagatccggcttccgttcctctcgctttccggggtc
ggcgaagccgccgcaaacagccttgcggaagccgggaaaaagggaccgtatatctccgtg
gatgacctgcagggcaggtctaaagtgtcaaaatccgtcattgaaacctttgaaacggcc
ggagtgctgaaagatttgcccaagagcagccagatgtctctgttttag
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