Caproiciproducens sp. NJN-50: EQM14_14480
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Entry
EQM14_14480 CDS
T05807
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
capr
Caproiciproducens sp. NJN-50
Brite
KEGG Orthology (KO) [BR:
capr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
capr03009
]
EQM14_14480 (rimO)
Enzymes [BR:
capr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EQM14_14480 (rimO)
Ribosome biogenesis [BR:
capr03009
]
Prokaryotic type
ribosomal protein modification factors
EQM14_14480 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QAT50877
UniProt:
A0A410Q6G5
LinkDB
All DBs
Position
complement(2967123..2968469)
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AA seq
448 aa
AA seq
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MAYSVGLVNLGCPKNQVDAELMLAILRKAGYELKQDAGEADVAIVNTCGFIDAAKQESIG
EILELARKKAEGRVKAIVVTGCLAERYREQILCELPEVDAVAGIGANSNIAQVVRQALGG
GKTELFPEKTALPLCGERSLLTPDYTAYLKIAEGCDNRCSYCAIPAIRGPYRSRPMEEIE
REARGLAESGAKEIILIAQDTSRYGYDRYHKLMLSELLRRLCRVEGLEWIRFLYAYPDSI
TDELLQTMAEEEKIVKYLDLPLQHCSARVLKAMRRAGDRGSLTALMGKIRDAVPGVTLRT
TLIAGFPGETEAEFDELCGFVRDVRFERLGCFAYSREEGTAAASLPDQLDEEEKRRRAEF
IMELQMGIMQEQGEALMGKTLRVLTEGCDREEGLCYGRSAADAPDIDGRVWFSSRGKPGP
GRFVNVKITDCIDGDPAGHAVGNQEESL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattcagtgggactcgtcaatctcggctgccccaaaaatcaggtcgacgcggag
ctgatgctcgcgattctgcggaaagcgggctatgaactgaaacaggacgcgggggaagcg
gacgtcgcgattgtcaacacctgcgggtttatcgacgcggcaaagcaggaatccatcggc
gaaatcctggagcttgcgcggaaaaaggccgaggggcgcgtcaaagcgatcgtcgtgacc
ggctgcctggcggagcgctaccgggagcagattctctgcgagctgccggaggtggacgcg
gtcgcgggcatcggggcgaacagcaatatcgcccaggtggtccggcaggcgctgggcggc
ggcaaaacggagctgtttccggaaaagacggcgctccctctttgcggagagcgcagcctg
ctgaccccggactacacggcttacctgaaaattgcggaggggtgcgacaaccggtgctcc
tactgcgcgatcccggcgattcgcggcccgtaccgctcccgcccgatggaggagatcgaa
cgggaagcgcgcgggcttgctgagagcggggcaaaagaaatcatcctcatcgcacaggac
acgtcccgttacggatatgaccggtaccataaactgatgctgtcagagcttctgcgccgg
ctttgccgcgtcgaagggctggaatggatccgtttcctctatgcttaccccgattccatc
acggacgagcttcttcagaccatggcggaggaggagaaaatcgtcaaatatctggacctt
ccgctccagcactgcagcgccagggtcctcaaagcgatgcggagggccggggaccgcgga
tccctgaccgccctgatgggtaaaatccgggatgccgtgcccggggtgacgctgcgcacg
acgctgatcgccgggttccccggcgaaacggaagcggagttcgacgagctttgcgggttt
gtccgggacgtccggtttgagcgcctcggatgctttgcctattcgcgggaggaggggacc
gcggcggcctccctgccggatcagctggacgaggaggagaaacgccgccgcgcggaattc
atcatggagcttcagatgggaatcatgcaggagcagggagaagcgctcatggggaaaacc
cttcgggtgctgacggaaggctgcgaccgggaagagggactctgctacggaaggagcgcg
gcggacgcgccggacatcgacggaagggtctggttctcttctcgcggaaaaccgggaccg
ggccggtttgtcaatgtgaaaatcacggactgcatcgacggcgatccggccgggcacgcc
gtcgggaatcaggaggaatcgctatga
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