Carnobacterium sp. CP1: NY10_200
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Entry
NY10_200 CDS
T04230
Name
(GenBank) tRNA SU 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
carc
Carnobacterium sp. CP1
Pathway
carc00730
Thiamine metabolism
carc01100
Metabolic pathways
carc01240
Biosynthesis of cofactors
carc04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NY10_200
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
NY10_200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carc03016
]
NY10_200
Enzymes [BR:
carc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
NY10_200
Transfer RNA biogenesis [BR:
carc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NY10_200
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
NAD_synthase
tRNA_Me_trans
DUF6859
Motif
Other DBs
NCBI-ProteinID:
ALV20823
UniProt:
A0A0U3MU36
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All DBs
Position
156138..157355
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AA seq
405 aa
AA seq
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MQYDEVMVRYGELSTKGKNKKSFINKLVQNVKFALHDFDELKIHGGRDRMHLTLNGADSE
VVLERLKPIFGIQNFSPVMRLERDMEQVKKTAVAMVQELYTEGKTFKISTRRSDHEFELD
TNDINQLLGAEVLKHVEGITVQVKKPDIDLRVEIRKEGFFLSSQTILGAGGLPVGSSGKG
MLMLSGGIDSPVAGYLTMKRGVEVEAVHFHSPPYTSPRALQKAKDLTSKLAAFVGSVQFI
EVPFTEIQEEIKKSIPEGYLMTVTRRMMMRITDRIREERRGLAIINGESLGQVASQTMHS
MIAINDVTTTPVIRPVVSMDKNEIIEIAQKIDTFELSIQPFEDCCTIFAPPAPKTKPDVE
KTRKYEARLDVEGLIQRAMEGLVISKIKVGDTLEEQQKEAFSDLL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacgatgaagtaatggttcgctatggcgaattgtccactaaaggaaaaaataaa
aaatcttttatcaataaattagtacaaaacgtgaaatttgctttacatgactttgatgag
ctaaaaattcatggcggtcgcgatcggatgcatttgacgttaaatggtgcagatagcgaa
gttgttttagaacgattgaaaccaatttttggtattcaaaatttttcgcctgtgatgcgt
cttgagcgtgacatggaacaagtaaaaaaaacagcggtggctatggtacaagaattgtat
acagaaggaaaaacatttaaaatttcaacacgtcgttcagatcatgagtttgaattagat
acgaatgacatcaatcaattattaggtgctgaagttcttaaacatgtcgaaggcatcact
gttcaagtgaagaagcccgatatcgatttacgcgtcgaaattcgcaaagaaggatttttc
ttgtctagtcaaacgatactaggagctggggggttgcctgtaggttcaagcggtaagggt
atgttgatgttatcaggaggaatcgattctccggtggctgggtacctaacgatgaaacgg
ggagttgaagtggaagccgttcatttccatagtccgccttatacaagtccgcgagcttta
caaaaagctaaagatttaacatcgaaattagcagcttttgtcggcagcgttcagtttatt
gaagtgccttttactgagatacaagaagaaatcaaaaagagcataccagagggatatcta
atgactgtaacacggcgtatgatgatgcgaatcacagaccgtatccgtgaagaacggaga
ggattggccattattaatggtgaatctcttggacaagtagcctctcaaacgatgcatagc
atgattgccatcaacgatgtgaccactactccggttattcgtccagttgtttctatggat
aaaaatgaaatcatcgaaattgctcaaaaaatcgatacctttgaattatctatccaacct
tttgaagactgttgtacgattttcgctccgcctgctccaaaaacaaaaccggatgtggaa
aaaacgcgtaaatacgaagctcggttagatgtagaaggcttgattcaacgtgcaatggaa
ggattagttatttcaaaaatcaaagtgggagacactttagaagaacagcaaaaagaagct
ttttctgatttgctttaa
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