Collimonas arenae: LT85_0330
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Entry
LT85_0330 CDS
T03512
Name
(GenBank) Tetracycline-efflux transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_0330
01504 Antimicrobial resistance genes [BR:
care01504
]
LT85_0330
Transporters [BR:
care02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
LT85_0330
Antimicrobial resistance genes [BR:
care01504
]
Gene variants
Tetracycline resistance genes
Transporters
LT85_0330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_4
Motif
Other DBs
NCBI-ProteinID:
AIY39490
UniProt:
A0A0A1F6Q7
LinkDB
All DBs
Position
complement(377411..378700)
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AA seq
429 aa
AA seq
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MTTFSTATQHKARAAAMPFIMLTVLIDMVSVGLIVPVLPALVGEFTGSQADTAFWYGAVA
FAFGLANFFGAPILGALSDRYGRRPILLLGFCGLALNFFATAFSTALWMLIVVRLIGGAM
QANAAVCNAYVADITQPEQRAKRFGMIGAMFGVGFIIGPVMGGLLGAINLRLPFIVAGSL
ALINLIYGYFVLPESLPAERRRSFSWKSANPLSSLQALSRLKTVGPLVGVVACSGLAQFI
LFTIWMLYTNLKFDWGPLQNGQALAAVGIMSVLVQGVLLNLLLKRFSPQRLAIIGLLSST
AAYLLWGMANHGWMMYAIIFANIFGPTVTAVIQSIISGATDSHNQGQTLGAVSSLNSLMA
VIAPVIGAPLLGAVSNLPKGDWRIGAPFYFCAALQCASLVLAYLHFRRQRQARTFAYLAQ
KLSSDATKA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgaccactttcagcactgcgacacagcacaaagcccgcgccgccgccatgcctttcatc
atgctgacggtcttgatcgacatggtttcggtcggtctgatcgtgccggtattgccggcg
ctggtcggcgaattcaccggctcgcaagcggacacggcattctggtacggcgccgtggcg
ttcgccttcggcctggcgaatttcttcggtgcgccgatcctgggcgcactgtccgacaga
tatggccgacgaccgatattgctgctgggattttgcggactggccttgaattttttcgcc
accgctttttcgaccgcactgtggatgctgattgtagtgcgcctgataggcggcgccatg
caagccaacgcagcagtgtgcaatgcctacgtagcggacatcacgcagccggaacaacgc
gccaagcgcttcggtatgatcggtgcaatgttcggcgtcggcttcatcatcgggccggtg
atgggcggcttgctgggagcgatcaatttacgcctgcctttcatcgtcgccggcagcctg
gccctgatcaacctgatctacggttattttgtcttgcccgaatcgttgcctgcggagcgg
cggcgcagcttcagctggaaatccgctaacccgctgtcttccctgcaagcgctgtcgcgc
ctcaaaacggttggccccctggtcggagtagttgcctgcagcggcctcgcacaattcata
ctgttcaccatctggatgctctacaccaacctcaagtttgactggggaccgctgcaaaac
ggccaggcgctggcagcggtcggcatcatgtcggtgctggtgcaaggagtattgctaaac
cttctgctcaagcgcttcagcccgcagcggctggcgatcatcggcctgctgtcgtcgaca
gccgcctacctgctgtggggaatggccaaccatggctggatgatgtacgccatcattttc
gccaacatcttcggccccacggttaccgccgtaatccaaagcatcatttccggcgcgacg
gattcgcataatcagggccagacgctaggcgcagtcagttcgctcaacagcttgatggcg
gtgatcgcgccggtcatcggcgcgcccttgctgggcgcggtatccaacctgccaaaagga
gactggcgcatcggcgcgcccttctatttttgcgcagcattgcaatgtgcttcgctggtg
ctggcgtacctgcacttccggcggcaacgccaggcacgcacctttgcgtatctggcacag
aaattgtcgtctgatgctacaaaggcgtga
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