Carnobacterium sp. PL17GRE32: FPV25_01830
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Entry
FPV25_01830 CDS
T06316
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
carn
Carnobacterium sp. PL17GRE32
Pathway
carn03030
DNA replication
carn03430
Mismatch repair
carn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
carn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPV25_01830
03430 Mismatch repair
FPV25_01830
03440 Homologous recombination
FPV25_01830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carn03032
]
FPV25_01830
03400 DNA repair and recombination proteins [BR:
carn03400
]
FPV25_01830
Enzymes [BR:
carn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPV25_01830
DNA replication proteins [BR:
carn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FPV25_01830
DNA repair and recombination proteins [BR:
carn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FPV25_01830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
HHH_3
DEDDh_C
T2SSK
Na_Ca_ex_C
YhfH
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QEM53750
UniProt:
A0A9W7VR51
LinkDB
All DBs
Position
407509..411828
Genome browser
AA seq
1439 aa
AA seq
DB search
MSESKEALFQALLGQIHWNDENTAIQNGWLENVVVHTKSRLWQFKIGLPTRIDAATFLTF
EEHLKKGFDHVGAVDFSIEVADQSQPANQAVLDYWPIIVNRSGISNGIAKATFQGQLPSF
ENNRYYIRVDNQPLKQLIQENYLEVIKQNYQMVGFPKVPFEIIIDDETAKDRRDVFVERA
NELAEQQQEMAKKAAEKQKEMAVAGNNGQAIKVDKIQLGKHIPVDDKLRAMNTYVEEQRF
VSMEGVVFDVEVKILKTGRRILNAKISDYSSAFLIQMFSRTDEDIAIFDAIRKGMWLRVR
GDLQMDDRFARDLVLNVRDLEQITKAKRQDNADKKRVELHVHTNMSMLDATNSISDFTNQ
AKDWGHTAIAVTDHATLQAYPEASGTAKSTGLKMIYGVEANIVDDGVPIAYNPDHIELKE
ATYVVFDVETTGLSAIYDNIIELAAVKMQNGNVIDTFEEFINPGRPLSATIIDLTGITDA
MLANTRTEKEVITDFREWVGDAILVAHNASFDMGFIDTAYNRHGFDKSHNAVIDTLEMSR
FLHPNLKSHRLNTLAKRYNVALEQHHRAVYDAETTGALAWIFIKEAATDHEIFYHDELNK
DVGKGDAYKQGRPFHAILLAKNQTGLKDLFKLVSASNIDYYYRVPRIPRSLLSSHRENLL
VGSACAGGEVFEALMQKGKVEAEQKAGFYDYLELQPKAVYKPLILDELIQDEETLEKIMK
DMLEIGESVNKPVVATGDVHYLNEEDKLYREILINSIKSNRTKNFPEAHFRSTEEMLREF
AFLGEETAYQIVVENSNAIADSIEFVEPLKDKLYTPTIEGAEQELTDMSFEKAHEIYGKE
LPEIVEARLDKELKSIISNGFSVIYLISQKLVKKSNDDGYIVGSRGSVGSSFVATMSGIT
EVNPLAPHYVCPNCHYSHFFTDGSVGSGFDLPDKPCPECGTNLDKDGQDIPFETFLGFKG
DKVPDIDLNFSGEYQARAHAYTKVLFGDDHVFRAGTIGTVADKTAFGYVLGYDQDKNLNL
RKTEKEFLAKGATGVKRTTGQHPGGIIVIPENMDVYDFTPIQFPADDVESEWKTTHFDFH
SIHDNVLKLDILGHDDPTMIRKLQDLSGINPTEIPIDDPEVYELFNGTEVLGVTKEQIYS
NTGTLGIPEFGTRFTRQMLEATKPSTFAELLQISGLSHGTDVWLGNAEVLVREKGLPLSE
VIGCRDDIMVYLIHRGLPESDAFQIMEKVRKGKGLSDEHKAIMREYDVPEWYMDSCEKIK
YMFPKAHAAAYVLNAMRVAWFKVKHPIWYYCAYLSVRASDFDLVSMSNGKESTKAKINEI
NAKGMEASTKEKQLLTVLEIVNEMWERGFTLKMVDINKSHATEFIIEEDNTLIAPFRAID
GLGTNVAKSIVAAREESPFLSKEDLQTRGKVSKSLIEYMTENHVLDGLPDQNQLSLFDF
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatctaaagaagccttatttcaggccttattaggacaaattcattggaacgat
gaaaacacggctatccaaaatggttggttagaaaatgtcgtggtccacaccaaatcacgg
ttgtggcaatttaaaattggcttaccaacacgtatagatgccgcgactttcttaaccttt
gaagaacacttgaaaaagggtttcgaccatgttggggcagtggacttttcaattgaggtt
gctgaccaaagccaaccagcaaatcaagctgtcctagactactggccaatcatagttaac
cggtctggtatttcaaacgggattgctaaagccactttccaagggcaattaccctcattt
gaaaataaccgctactatattcgcgtggacaatcaaccattaaaacaactcattcaagaa
aactaccttgaagttatcaaacaaaattaccaaatggtcggatttcctaaggtgccgttt
gaaattattatcgatgatgaaacggccaaagaccggcgtgatgtctttgtagagcgggcc
aatgaattagctgaacaacaacaagaaatggccaaaaaagcagctgaaaaacaaaaagaa
atggctgttgctggcaataatggtcaagcaattaaagtggacaaaattcaattaggcaaa
catatccccgttgacgacaaattaagagccatgaatacttacgttgaagaacaacggttt
gtatccatggaaggtgtagtcttcgatgttgaagttaaaatattaaaaaccggccgtcgc
attttaaatgccaaaatttcggattatagctcagcattcttaattcaaatgttttctaga
acggatgaagatatcgccatttttgacgccatccgcaagggtatgtggttgcgagttcgc
ggtgatttgcaaatggatgaccgttttgcccgtgacctagtcctaaatgttcgcgacttg
gagcaaattaccaaggctaaacgccaagataatgctgacaagaagcgggttgaattacac
gttcacaccaatatgtccatgttggatgcgactaattcaatttccgatttcaccaaccaa
gctaaagattggggacatacagctattgcggtcactgaccatgcaaccctgcaagcttat
ccagaagcatcagggacggctaaatccactggtttgaaaatgatttacggtgttgaagcc
aatatcgtggatgatggcgtccctatcgcctacaatccggaccatatcgaattaaaagaa
gcaacctatgtcgtattcgatgtggagactactggattatcagctatttacgataacatt
atcgaattagcggccgttaaaatgcagaacggtaatgtgattgatacttttgaggagttt
attaatccaggacgaccactctcggctactattattgatttaacggggattactgacgcc
atgttagccaatacccggactgaaaaagaagtgattacggactttagagaatgggttggg
gacgctattttagtggcccacaatgccagctttgatatgggctttattgatacagcttac
aaccgacatggttttgacaagtcccataacgccgtaatcgataccttagaaatgtctcgt
ttcttgcatccaaacctgaaatcgcatcgtttgaataccttggccaaacgctataatgtg
gccctagagcagcatcaccgggctgtatatgatgcggaaaccacaggtgccttagcctgg
atttttatcaaagaagcagccactgaccatgagattttctaccatgatgagttgaacaaa
gatgttggtaaaggggacgcctacaagcaaggtcgaccattccacgccattttgctggct
aaaaaccaaacagggttaaaagacctattcaaattggtatctgcgtcaaatatcgactat
tattaccgagtacctcgaattccgcggtcactcttatctagtcatcgagaaaacttgcta
gtcggttcagcctgtgcaggcggtgaagtatttgaagctttaatgcaaaaagggaaggtt
gaagcagagcaaaaagctggcttctacgactacttggaactccaaccaaaggcagtttac
aaacctttgatcttagatgaattgattcaagatgaagaaacgcttgaaaaaatcatgaaa
gatatgcttgaaattggggaatcggtcaacaaacctgttgttgcaacaggagatgtccat
tacctaaatgaagaggataaattgtatcgggaaattttaattaattcgatcaaatctaac
cggaccaaaaacttcccagaagctcatttccgttcaactgaagaaatgttgcgagagttt
gctttcctaggcgaggaaacggcataccaaattgtcgttgaaaattccaatgccattgca
gacagcattgagtttgtggaacctttgaaagacaaattgtatacaccaacaattgaaggg
gcggaacaggaactgacagatatgtcatttgaaaaagcccatgaaatctacggtaaagaa
ctaccagaaatcgtagaggctcgcttagataaagaattgaaatctattatctccaatgga
ttctcggttatttacctgatttcacaaaaactggtgaagaaatcgaatgacgacggctat
atcgttggttcccgtgggtcagtagggtcctcatttgtagcgactatgtcagggattacg
gaagtaaatccgctggcgccgcattatgtttgcccgaattgccactatagtcatttcttt
actgatggatcggtggggtctgggttcgacttgccagataaaccttgtcctgaatgtggg
actaacttggataaagacggacaagatattccatttgaaaccttcttaggatttaaaggg
gacaaggtacctgatatcgatttgaacttctctggagaataccaagcccgcgcccatgcc
tacactaaagtccttttcggtgacgaccacgttttccgggcgggaacaattggtacagtc
gcggataaaacagccttcgggtatgtactaggttacgaccaagataagaatttaaatctt
cgtaaaaccgagaaagaattcttagccaagggtgcaacaggcgttaaacggacaaccggt
cagcatccagggggaatcattgttatccctgaaaatatggatgtatatgactttacccca
attcaattcccggctgacgacgtggaatctgaatggaagacgacccacttcgatttccat
tccatccatgataacgtcttgaaattagatatccttgggcacgatgacccgactatgatt
cgtaaattacaggatttatccggcatcaatccaaccgaaattccaatcgatgatccagaa
gtatatgaattattcaatgggacagaagttttaggtgttaccaaagaacaaatctattcc
aacactggtacattaggcattcccgagtttgggacccgatttacccgacaaatgcttgaa
gcaaccaaaccttcaaccttcgccgaactactgcaaatatccggattatcgcatggtaca
gacgtttggttaggtaatgccgaagtacttgtccgtgaaaaagggctaccgctaagtgaa
gttatcggttgtcgtgatgatatcatggtttacttaatccatcgtggtctacctgaatca
gacgccttccaaataatggagaaagttcgtaaaggtaaggggttatctgacgaacacaag
gccatcatgcgtgaatacgacgtgccggaatggtatatggattcatgtgaaaaaatcaaa
tacatgttcccgaaagcccatgccgctgcctatgtattgaatgccatgcgggtagcttgg
tttaaagtgaaacatccaatttggtactactgtgcttacttatcagtacgggcgagtgac
tttgaccttgtatccatgtcaaacgggaaagaatcgactaaggccaaaattaacgaaatc
aatgccaaaggaatggaagcttctactaaagaaaaacaattgttaacagtccttgagatt
gtaaacgagatgtgggaacgtggctttaccttaaaaatggttgatatcaataaatctcat
gcaactgaatttattattgaagaggacaatactttgattgcaccttttagagctattgac
ggtttgggtacaaacgtggccaaatctattgttgcagcacgtgaggaatcaccgttctta
tcaaaagaagacttacaaactcgtggtaaagtgtctaaatcattgattgaatacatgacc
gagaatcatgtattagatggtttaccagaccaaaaccaattatcactatttgatttttaa
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integrated database retrieval system
