Cygnus atratus (black swan): 118245317
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Entry
118245317 CDS
T09349
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118245317 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cata01001
]
118245317 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118245317 (TAF1)
03036 Chromosome and associated proteins [BR:
cata03036
]
118245317 (TAF1)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
118245317 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118245317 (TAF1)
Protein kinases [BR:
cata01001
]
Serine/threonine kinases: Other
TAF1 family
118245317 (TAF1)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118245317 (TAF1)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
118245317 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Ribosomal_L44
zinc_ribbon_12
Motif
Other DBs
NCBI-GeneID:
118245317
NCBI-ProteinID:
XP_035397262
EnsemblRapid:
ENSACYG00000000922
LinkDB
All DBs
Position
13:complement(11251205..11283864)
Genome browser
AA seq
1916 aa
AA seq
DB search
MSDSESEEEADGGRAEPFSLAGFLFGNINEAGQLEGDSVLDKESKKHLAGLGALGLGNLI
TEITASEDDSPEADGAHLDEEGWVKSTEDAVDYSDINEVAEDESRRYKQAMGSLQPVRRP
DEDEDDYDADCEDIDSKLMPPPPPPPVPGKKEDEKDAASTVSEDGDGIILPSIIAPSSAA
SDKVDFSSSSDSESEMGPQEARQAESKEGKLTLPLAGIMQRDATKLLPSVTELFPEFRPG
KVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELAQEVQIQEGEVVVESGMEGKSPWEYEF
AAPPPPEQCLSDDEITMMAPVESKFSQSTGDTDKVTDTKPKVAEWRYGPAQLWYDMLGIP
EDGSGFDYGFKLKEKTEQEVKGQADERDGELMDEKDDLLADEHFLMVTQLQWEDDVIWNG
EDVKHKGTKTQRASLAGWLPSSMTRNATAYNAQQGLNRSGSLLNPPIPLAQKPSVAGVLG
IAKGKEKQAPEQQVSLDEDKPWYSIFPIDNEELVYGRWEDNIIWDDQAMETYLDPPVLTL
DPNDENIILEIPDEKEEMTLNSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVK
DPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRQFHRPPLKK
YSFGALSQPGPHAVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAE
YSEENAPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQA
FENNLFRAPIYLHKMPETDFLIIRTRQGYYVRELVDIFVVGQECPLYEVPGPNSKRANTH
IRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWW
VLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMK
IDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQ
PVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEG
PMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEEMGK
NIENMLQNKKTSSQLSREREEQERKELQRMLLGEDSGNDKERGKKDRRDKKGLSSGASAN
SHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPSVIDAYCRIRTTKDE
EFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLK
CGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKI
VLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMV
TLSSILEGIINDMRDLPNTYPFHTPVNPKVVKDYYKIITRPMDLQTLRENVRKRQYPSRE
EFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDD
QVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDLETICKNISKHKYQ
NRETFLDDVNLILANSIKYNGPDSQYTKTAQEIVNICYQTLAEYDEHLTQLERDISTAKE
AALEEADLESLDPMTPGPYTPQMRQGRGRLGEEDSDVDIEGFDEDDDGKPKTPAPEVEDA
DGDLADEEEGSAQQPQASVLYEDLLMSDGEDDDDGSDEEGDNPFSSIQLSESGSDSDVET
NPVRPKQPHVLQENTRMGMDNEESMMSYEGDGGETSQVMEDSNISYGSYEEPDPKSNTRD
TSFSSIGGYEISEEEEEEEEQRCGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggagagcgaggaggaggcggatggcgggcgcgccgagcccttctcgctg
gccggcttcctcttcggcaacatcaacgaggcggggcagctggagggggacagcgtcctc
gacaaggagtccaagaagcacctggccgggctgggggccctggggctgggcaacctcatc
accgagatcaccgccagcgaggacgacagcccggaggcggacggagcccacctggacgag
gaaggttgggttaagagcacagaagacgctgttgattattcagatattaatgaagtggca
gaagatgaaagccgtaggtataagcaggcaatgggcagcctgcagccagttcgaagacca
gatgaagatgaggatgattatgatgccgactgtgaagatattgattccaagctgatgccg
ccaccaccaccgcccccagtacctggaaagaaagaagatgaaaaggatgcagcttccact
gtatctgaagatggagacggtatcattttgccctccatcattgctccttcctctgctgcc
tccgacaaggtggatttcagcagcagctctgattctgagtcagagatgggacctcaagaa
gccaggcaggcagaatccaaggaaggcaaactcacacttcctcttgcaggaatcatgcag
cgagatgctaccaaactgttgccaagtgttacagagctcttcccggaatttcggccaggc
aaggtgctgcgtttcctccgtctctttggccctggaaagaatgttccatcggtttggcgt
agcgcccgaaggaagcgcaagaagaagcatcgggagttggcacaagaagtgcagatacag
gagggtgaagttgtagttgagagtggaatggaaggaaaatctccctgggaatatgagttt
gctgctcctccccctcctgagcagtgcctttcagatgatgagatcaccatgatggcacct
gtggaatcaaaattttcccagtcaactggcgatacagacaaagtgacagatacgaagcct
aaagtggcagaatggcgctatggccccgcacagctctggtatgacatgctgggaatccct
gaggatggcagtggatttgattatggtttcaagctgaaagagaagacagagcaggaggtt
aaaggacaggcagatgagagggatggagagttgatggatgagaaggatgatctgttagct
gatgagcacttccttatggtgacacagctccagtgggaggatgatgttatctggaatgga
gaagatgtcaaacacaaaggaactaaaacacagcgggcaagtctggcaggctggctgcca
tcaagcatgactagaaatgccactgcatacaatgcccaacaagggttgaaccgcagtggc
tctttgctcaatccacctattccactagcacagaaaccaagcgtagcaggagttctaggt
atagcaaagggcaaagagaagcaggcccctgagcagcaagtttccctggatgaagacaag
ccctggtactctattttcccaattgataatgaagagttagtatatggccgttgggaagat
aatatcatctgggatgatcaggcaatggaaacctacttggatccccctgtcttgacactt
gatccaaacgatgaaaacataattctagaaattcctgatgaaaaggaagaaatgactttg
aactctccatccaaggagaacaagaaagaatcttctctaaagaagagtcgaatcctgttg
ggaaaaactggtgtcatcaaggaagaaccacagcagaacatgtctcagccagaggtgaag
gatccctggaacctctccaatgatgagttttactaccccaaacagcaggggcttcgagga
acctttggaggcaacatcatacagcactctatcccagcagtggaacttcgccagccgttc
tttcccacccatatgggtcctatgaagctccgacaatttcatcggcctcccctgaagaaa
tactcttttggtgccctgtcccaaccaggaccccatgctgtgcaacctctgctgaagcat
ataaaaaagaaagctaagatgagagagcaggagcgtcaggcttctggcgggggtgaaatg
ttcttcatgcgcacaccacaggacctaactggcaaggatggagatcttatccttgctgaa
tacagcgaggaaaacgctcctttaatgatgcaggttggcatggcaacaaagattaaaaat
tactacaaaaggaaacctggcaaagatccgggagctccagactgtaaatatggagagact
gtttattgtcacacttctccattcctgggttctctgcatccaggccagctactgcaggca
tttgaaaacaaccttttccgggcccctatctacctacataagatgcctgaaacagatttc
ctgattatccggacacggcaaggctattatgttcgagaattagtggatatttttgtagtt
ggccaggagtgcccactttatgaagtacctggtccaaactctaaacgagccaacacccat
atcagagattttctgcaggtttttatttatcgcctcttttggaaaagtagagaccgtcct
cggagaattcgcatggaggatatcaagaaagcctttccctcacactcggagagcagtatc
cgaaagcggctaaagctttgtgctgatttcaaacgcacagggatggactcaaactggtgg
gttttaaagccagatttcagactgccaacagaggaagaaatcagagcaatggtatcccca
gagcagtgctgtgcttattacagcatgatcgcagctgagcagcgcttgaaggatgcaggt
tatggggagaaatccttctttgcaccagaagaagagaatgaagaggatttccaaatgaag
attgatgatgaggtgcgcacagccccgtggaacaccacacgagccttcattgctgctatg
aagggcaagtgtcttctggaagtgactggtgtagcagatcctactggctgtggtgaagga
ttttcttatgtgaagattccaaacaaaccaacgcagcagaaggatgacaaggaaccccag
ccagtgaaaaagacagtgacggggacagatgctgatctgcgtcgactttcgctgaagaat
gctaaacagcttctgcgtaaatttggagtgcctgaagaggagataaagaagctgtcccgg
tgggaagtgattgatgtggtacgcacaatgtctacagagcaggctcgttcaggggaaggt
cctatgagcaaatttgcacgtggatctcggttttctgtagcagaacatcaagagagatac
aaagaggagtgtcagcgcatttttgatttgcaaaataaggttctggaatccactgagatc
ctctcaacagacacagacagcagctcagctgaagacagtgactttgaagagatgggaaag
aatattgagaatatgttacagaacaagaaaactagttctcagctctctcgggaaagagaa
gagcaggaacgaaaggaattgcagaggatgcttttgggagaagacagtgggaatgacaaa
gagaggggcaaaaaggacaggagagacaaaaaggggctgtcttcaggagcttcagcaaac
tctcacaaagatgatgacactgcctctgtaaccagccttaattcctctgccactggccgc
cgcctcaaaatctatcgcacgtttagagatgaggatgggaaggaatatgtgaggtgtgag
acagttcgaaagccctctgttattgatgcctactgccgaatacggactacaaaggatgaa
gagttcatacgaaagtttgctctatttgatgaacagcaccgtgaggaaatgcggaaggag
cgacgtaggatccaggaacaattaagacggttaaaacggaaccaagaaaaagagaaactg
aagggccctccagaaaagaagcccaagaaaatgaaagagcgtccagacctaaaactgaaa
tgtggagcgtgtggtgcaattggccatatgaggactaataagttctgccctctttactac
caaacaaatgccccaccttctaatcctgttgcaatgacagaagagcaggaggaagagctg
gaaaaaacagtcattcacaatgataatgaagaactcatcaaagtagaaggaacaaaaatt
gtccttggaaagcaactgattgagagcgcggatgaggttcgcaggaaatcactggttctg
aagtttcctaaacagcagcttcctccgaagaagaagcggcgagtaggaacaaccgttcac
tgcgactatctgaatcgtcctcataaatccatccaccgacggcgaacagatcccatggtg
acgctgtcatccatcttagagggcatcatcaatgatatgagggatcttcctaatacatat
cccttccacacgccagtaaatccaaaagttgtcaaagattattataagattattactcgg
cctatggatttgcagacattgcgtgagaatgttcgtaagcggcaatacccatcacgggaa
gagttcagagaacacctggaactaattgtgaagaacagtgcgacatacaatgggccaaag
cactcgctgactcaaatatctcagtccatgctggacctgtgcgatgaaaagctaaaagag
aaggaagataaactggctcgattagaaaaagcaattaatcccctcctggatgatgatgac
caagtggccttttccttcattttggataacattgtcactcaaaagatgatggcagttcca
gattcttggccgtttcatcatccagttaataaaaagtttgttcctgattattacaaggtc
attgctaatccaatggatctagagaccatctgcaagaatatctccaaacacaagtaccag
aacagagagactttcctggatgatgttaacctcatccttgccaacagcattaagtacaat
gggccagacagtcagtacacaaaaacagcccaggagatcgtaaacatctgttatcagact
ttagctgagtacgatgagcacctgactcaacttgagagagacatctctactgctaaggaa
gcagcgctagaggaggcagatctggaaagtcttgatcctatgacccctggtccctatact
ccacagatgcgccaggggcgaggtaggctgggcgaggaagactctgacgtagatattgaa
gggtttgatgaggatgatgatgggaaacctaagactccagccccagaagttgaagatgca
gatggtgaccttgctgatgaagaagaaggatcagcccagcagcctcaggccagtgtcctt
tatgaagacttgctcatgtcagatggagaggatgatgatgatgggagtgatgaagaagga
gataatcctttctcgtctatccaactgagtgagagtggcagtgattcagatgtggagacc
aatccagtgagacctaaacaacctcatgttctccaagagaacacgcgaatgggcatggac
aatgaagaaagcatgatgtcttatgaaggtgatggtggggagacatctcaggttatggag
gacagtaatatcagctatggcagctatgaagaaccagacccaaaatccaacacaagagat
actagtttcagcagtattggaggatacgagatctctgaagaagaggaagaagaagaggaa
cagcgttgtggaccaagcgtattaagtcaggtccatctgtctgaggatgaggaagacagt
gaagattttcattccattgcaggagacagtgacctggactcagatgaataa
DBGET
integrated database retrieval system
