Cygnus atratus (black swan): 118245370
Help
Entry
118245370 CDS
T09349
Symbol
TRMT2B
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA (uracil-5-)-methyltransferase homolog B
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cata03016
]
118245370 (TRMT2B)
Enzymes [BR:
cata01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
118245370 (TRMT2B)
Transfer RNA biogenesis [BR:
cata03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
118245370 (TRMT2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_11
Ubie_methyltran
Methyltransf_15
Methyltransf_23
Methyltransf_4
Methyltransf_32
Methyltransf_12
PrmA
Cons_hypoth95
UPF0020
AviRa
mRNA_G-N7_MeTrfase
TPMT
PCMT
N6_N4_Mtase
DREV
Motif
Other DBs
NCBI-GeneID:
118245370
NCBI-ProteinID:
XP_035397398
EnsemblRapid:
ENSACYG00000001566
LinkDB
All DBs
Position
13:complement(11115618..11124227)
Genome browser
AA seq
479 aa
AA seq
DB search
MALCRTLSLMCRRLRQLLSTQCALLSSLPGRDCSLLVEKRAEKWKKRNAGEGCSLPGSSW
EERLADAATPLWRLPYQEQLQVKYENQRKVLQTLTSRLQELGVDVQKPGELCCPLRPVVP
SPITNGYRNKSTFSVNQGPDGNPKTVGLYVGTGRARNIVCVRADHVKNVPPKHKQVAQCY
EEFIRRSPLDSCILFHEGGHWRELVVRTTSHGHTMAIVTFHPQKLGQEALATQKALLKEF
FTSGPGAGCGLTSLYFQESTMTRCSHEQSPFQLLYGEPHIFEDLLGLKFRISPDAFFQVN
TSGAETLYQAVGELSQADRDTVLLDVCCGTGTIGLSLARRVSKVIGIEIVEKAIEDARWN
AAFNGISNCEFHSGKAEAALPQLLCSWEDTRPLVAVVNPSRAGIHYRVVRAIRNCKAIQR
LLYISCKPEGEATRNFLELCCPPDPGKKLVGEPFAPVLAIPFDLFPHTVHCELVLLFSR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccctgtgccgcacgctgagcctgatgtgtcggcgccttcgccagctgctgagcacg
cagtgcgcgctcctgagcagcctgcccgggcgggactgcagcctgctggtggagaagaga
gcagaaaagtggaaaaagagaaatgctggagagggctgcagcctgccaggctcctcctgg
gaagagaggttagcagacgcggcaactccactgtggagacttccctaccaggagcagctg
caggtcaagtacgaaaaccagaggaaggttttacagacactgacttcgcgtctgcaggag
ctgggtgtagatgtgcagaagcctggtgaactctgctgtcctctccgtcctgtagtcccc
tcacccatcactaatggctaccgaaacaaatctactttctctgtgaaccaaggaccagat
ggaaaccccaaaactgtgggattgtacgtgggaactggcagagcaagaaatattgtctgc
gtgagagctgaccatgtgaagaatgtacccccaaaacacaagcaggtagcccagtgctat
gaggagttcatccgtcgctcccccctggactcctgcattctcttccacgaaggtggacac
tggcgagagctcgtggtacgcaccaccagccatggccacaccatggctattgtcaccttc
cacccccagaagctgggccaggaggctctggctactcagaaggcattgcttaaggagttc
ttcacttctggacctggagcagggtgtggcttgacttcactttacttccaagagagcacc
atgacgcgctgttcccacgagcagtcacccttccagctcctttatggagaaccacacatc
tttgaagatttgctcggcctgaaatttcgcatctctccggatgcctttttccaagtgaac
acgagtggagcagaaactctgtaccaggcggtcggggagctgagtcaggctgacagagac
accgtcctccttgatgtctgctgtgggaccggcacaattggtctctctctggctcgccgt
gtgtccaaggttattggtatcgagatagtggagaaggcaatagaggatgctaggtggaat
gcagcatttaatggaatttccaactgtgagtttcacagtggaaaggcagaggctgcgtta
ccacaactgctgtgctcatgggaagatacccgaccccttgttgctgtggtgaacccatcc
cgagctgggatccattacagggttgtgcgagccatccgaaactgcaaggccatccaaagg
ctgctctacatctcctgcaagccagagggcgaagccacgaggaactttcttgagctgtgc
tgtccccctgacccagggaagaagctggtaggagagccgtttgcccctgtgttggccata
ccttttgacctgtttcctcatactgttcattgtgagctggtgctgctgttctcccgctga
DBGET
integrated database retrieval system
