Cygnus atratus (black swan): 118247409
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Entry
118247409 CDS
T09349
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cata03016
]
118247409 (TRDMT1)
Enzymes [BR:
cata01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
118247409 (TRDMT1)
Transfer RNA biogenesis [BR:
cata03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
118247409 (TRDMT1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
118247409
NCBI-ProteinID:
XP_035401269
EnsemblRapid:
ENSACYG00000015046
LinkDB
All DBs
Position
2:21749545..21780207
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AA seq
404 aa
AA seq
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MAALRVLELYSGIGGMHQALRESCTSAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGI
TLKEFDRLSFDMILMSPPCQPFTRIGLQGDVSDPRTKSFLYILDILPRLQKLPKYLLLEN
VKGFESSSARNELLRTLETCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLHQEPFFFHAPG
QILTRFPDLEDKIQDLEELCKDKVVDKVCESSSLPSGEKSLDSNVGPHCSSKKSLPKGAF
LFKLETAEEIAKKHNQDNDSSIQMLEDFLEEENEEMSRYFLAPKFLVRYAFLLDIVKPTC
RRSTCFTKGYGHYVEGTGSVLQTAVDVQLESVFKHIENLPEEEKLMKLSTLKLRYFTPRE
IANLHGFPPEFGFPDKVTVKQCYRLLGNSLNVHVVAKLISVLLG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcgggtgctggagctgtacagcggcatcgggggcatgcaccaggccctg
agagaaagctgcacatctgcagaagttgttgctgctgttgatgtgaacactcttgccaac
gaagtttataagcacaactttcccagcacaccactatgggcaaagacgattgagggcata
acactgaaagaatttgacagattatcttttgatatgattttgatgagccctccttgtcag
ccatttacaagaattggcctacaaggtgatgtatctgatccgcggacaaagagctttctc
tatattcttgatattctcccaaggctccagaagcttccaaaatacctacttttagaaaat
gttaaaggatttgaatcctcttctgcgagaaatgaacttttgcgaacactagaaacatgt
ggatttaagtatcaagaatttctcctatctccaacttgtcttggcattcccaattctagg
ctgcggtattttctaattgcaaagcttcaccaagagccatttttctttcatgctcctggt
cagatattgacaagattcccagatctagaagacaagattcaggatctagaagagttatgc
aaggacaaagttgttgataaagtgtgtgaatctagttctttgccttctggagagaagagt
ctggattcaaatgttggtcctcattgcagcagcaagaagagtttaccgaaaggggccttt
ctttttaagcttgaaacagcagaagaaattgcaaagaaacataatcaggacaatgattcc
tctattcaaatgctagaagatttcctggaagaggaaaatgaagaaatgagtcggtatttc
ttagcacccaaattcttggtgcgctacgctttcttattagacattgttaaacccacttgc
cggagatccacctgctttacaaaagggtatggacactatgtagaagggacaggctcagtt
ctgcagacagcagtggatgtacagctcgaatcagtgtttaaacacattgaaaacttacct
gaagaagagaagcttatgaaactgtcaacactaaaactgaggtattttactccgagagaa
atagcaaatctacatggattccctccagaatttggctttcctgacaaagtaacagtgaaa
caatgctaccgtctcctgggaaatagcctcaacgtacatgtggtggcaaaattgatttct
gttctgcttggataa
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