Cygnus atratus (black swan): 118253899
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Entry
118253899 CDS
T09349
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04020
Calcium signaling pathway
cata04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118253899 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118253899 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118253899 (GRIN2C)
Ion channels [BR:
cata04040
]
Ligand-gated channels
Glutamate (ionotropic)
118253899 (GRIN2C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
118253899
NCBI-ProteinID:
XP_035414661
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Position
18:6233315..6242885
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AA seq
1329 aa
AA seq
DB search
MGRVPAPALLLLLVLGCSAAFNDILLPGPEEPVVNVAVVFGGTSYPLHIRSRLSPQSFLD
MPVEIHPITVIVNDTNPSTLLTHICNVLASHKIHGIVFEDNVGTEAVAQILDFLSSQTQV
PVISISGGSAVVLTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNI
FLDVIRAFTDASYFGWELQDVLTFEMSQERSGSRTQRLLRQLDAQVLIAYCSREEAEFLF
AMAEQAGLVGPGYVWIVPSLAVGNMELPPASFPVGLISVVTESWKLSLRQKVRDGVAIIA
MGAASYFRAHGFLPDMGRDCRAPATTVTNSSFYRHLLNVTWEHRDLSFNEGGYLVRPTMV
VISLNQHRLWEMVGKWEHGIIHMKYPVWPRYGAFLQPVVDNRHLTVATLEERPFVIVENT
DPSTGVCVRNTVPCRKQTNASARTRAHISLWCFSGDGLADPYTKLCCKGFCIDILKKLAK
TVKFSYDLYLVTNGKHGKIVRGVWNGMIGEVYYQRADMAIGSLTINEERSEIVDFSVPFV
ETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNQNLT
SGKRPGGPSFTIGKSVWLLWALVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANL
AAFMIQEQYIDTVSGLSDRKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYN
QRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDS
RWKRAIDLALLQFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMG
LSLLVFAWEHLVYWKLRHNVPKSHKLDFLLAISRGIYSCFSGVQTLPSPRRAPTPDVTAS
SAQANVLKMLQAAKEMVSTASVGGSLEHATRTIEDWSSRSEHLQTTFSLRTPQLVVQNST
GTHRGLSSGLAPVERPGRAHAPKGAPPGLPLPIPVDSRLPGEEKRRGASERVPRVLHPLK
FQGGCAGDKARRGCVVGSLPHLLAKTAPEEDFGEHMVMGNHIGAPIATPTSPRELPLPDI
YREHKRGGRLPNTPLLYGDRGHQGSGTVPQLLPTLETRREVGNPSLPPACAHSSFPKATR
TCRAEREHPSHRASTARASWERGEKHQATALLRCGAHPPAAHTDIPDLFPEAEAAHSCGP
HCPEAAGRLVGTGRALRLPVAQLPSYREACRQKPRGTACAPYTYMDSYAHLPIYLGHLSR
GSPPPREHPGVLGGGRGSGRWDGACRGWGRRGEPGFLRAVGPERLAARGVMSPCAGGSWR
RVSSLESEV
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagtgccggcacccgctctgctactgttgctggtgctgggctgctcggccgcc
ttcaacgacatcctgctgcccggccccgaggagccagtggtcaatgtggccgtggtgttc
gggggcacatcctacccgctgcacatccgctcccgcctgagcccccagagcttcctggac
atgcccgtggagatccaccccatcaccgtcatcgtcaacgacaccaaccccagcaccctc
ctcacccacatctgcaacgtcctggccagccacaagatccacggcatcgtcttcgaggac
aacgtcggcacggaggcggtggcccagatccttgacttcctctcctcccagacccaggtc
cccgtcatcagcatcagcggcgggtctgcagtggtcctcaccccgaaggagcccggatcg
gccttcctgcagctgggcgtctccatcgagcagcagatccaagtgatcttcaaggtgctg
gaggaatacgactggggctccttcgccgtcatcaccagcctctacccgggctacaacatc
ttcctggacgtcatccgcgccttcacagacgccagctactttggctgggagctgcaggac
gtgctcacctttgagatgagccaggagcggagcggctccaggacgcagcggctcctgcgg
cagctcgatgcccaggtgctcatcgcctactgctcgcgggaggaggctgagttcctcttc
gccatggccgagcaggccggcctcgtggggccgggctacgtctggatcgtgcccagcctg
gcggtgggcaacatggagctgccgcccgcctccttccccgtcggcctcatcagcgtggtg
acggagagctggaaactcagcctgcggcagaaggtgcgggacggggtggccatcatcgcc
atgggggcggccagctacttccgagcccacggcttcctcccggacatgggacgggattgc
cgggcgcctgccaccaccgtgaccaacagcagcttctaccggcacctcctcaatgtgacg
tgggagcaccgggacctctccttcaacgagggtggctacctggtccgccccaccatggtg
gtgatctcgctcaaccagcaccggctctgggagatggtggggaaatgggagcatggcatc
atccacatgaagtacccggtgtggccccgctatggcgccttcctgcagcctgtggtagac
aaccggcacctgacggtggccacgctggaggagcggcccttcgtcatcgtggagaacacc
gaccccagcactggcgtctgcgtgcgcaacaccgtgccctgccgcaagcagaccaacgcc
tccgccaggacccgggcccacatttccttgtggtgtttcagtggtgatggcctggcggac
ccctacaccaagctgtgctgcaagggcttctgcattgacatcctgaagaagctggccaag
acggtgaagttctcctacgacctctacctggtgaccaacggcaagcacggcaagattgtc
cgtggggtgtggaacggcatgatcggggaggtgtactaccagcgcgccgacatggccatc
ggctccctcaccatcaacgaggagcgctccgagatcgtcgacttctccgtgcccttcgtg
gagaccggcatcagcgtgatggtggcgcggagcaatggcaccgtctcaccctccgccttc
cttgagccctacagcccggccgtgtgggtgatgatgttcgtgatgtgcctcaccgtggtg
gccgtcaccgtcttcgtgtttgagtacttcagccctgtcggctacaaccagaacctcacc
agtggcaaaaggccgggcggtccctccttcaccatcggcaagtcggtgtggctgctgtgg
gccctggtcttcaacaactccgtgcccatcgagaaccccaagggcaccaccagcaagatc
atggtgctcgtctgggccttcttcgccgtcatcttccttgccagctacacggccaacctg
gccgccttcatgatccaggagcagtacatcgacactgtgtcggggctgagcgacaggaag
ttccagaagccgcaggagcagtacccccccttccgcttcggcacggtccccaacggcagc
acggagaggaacatccgcagcaactaccctgacatgcacacccacatggtgaagtacaac
cagcgctctgtggaggacgccctcaccagcctcaaaatggggaagctggatgccttcatc
tacgacgcggcggtgctcaactacatggcgggcaaggacgagggctgcaagctggtgacc
atcggctcggggaaggtgttcgccaccacgggctacggcatcgccctgcagaaggactcg
cgctggaagcgggccatcgacctggccctgctgcagttcctgggagatggggagacccag
aagctagagacagtgtggctgtcggggatctgccagaacgagaagaacgaggtgatgagc
agcaagctggacatcgacaacatggccggggtcttctacatgctgctggtggccatgggg
ctcagcctgctggtcttcgcctgggagcacctcgtctactggaagctgcggcacaacgtc
cccaaatcccacaagctcgacttcctcctggccatcagcaggggcatttacagctgcttc
agtggggtgcagaccctgcccagccccaggcgggcgcccacgcccgacgtgacggcgagc
tcggcccaagccaacgtgctgaagatgctgcaggccgccaaggagatggtgtcgacggcc
agcgtgggtggctcgctggagcacgccacgcgcaccatcgaggactggagcagccgcagc
gagcacctccagaccaccttctctctcaggacaccccagctcgtggtgcagaacagcacc
ggcacccaccggggactctcttccggcctggcccccgtcgagaggccgggcagagcccac
gctcccaagggggcccccccggggctccccctgcccatccccgtggactcacggctgccc
ggggaagagaagcggaggggagcgagcgagcgcgtcccccgcgtccttcaccccctgaag
tttcaggggggctgtgccggggacaaagcccgccggggctgcgtggtgggcagcttgccc
cacctcctggcgaagacagcaccggaggaggattttggggagcacatggtgatggggaac
cacattggtgcccccattgccaccccaacgtcgcccagggagctcccgctgcctgacatc
tacagggagcacaagcgggggggccggctgcccaacacccccctgctctacggggatcgg
ggacatcagggctcagggacagtgcctcagctgctccccaccttggagacgaggagggag
gtgggaaacccctccctgcctcctgcctgtgcccacagctccttcccaaaagccaccagg
acttgcagagcggagcgggagcatccaagccatcgggcgagcacggccagggcgtcctgg
gagcggggtgagaagcaccaagccacggcactgctacgctgtggcgcccacccacccgct
gcccacaccgacatccccgacctcttccccgaagccgaggccgcccacagctgtggcccc
cactgccccgaggccgccgggcggctggtggggacgggacgggcgctgcgcttgcctgtg
gcacagctgccatcgtaccgggaagcgtgccggcaaaagccccgtggcactgcatgcgcg
ccctacacctacatggactcctacgctcacctgcccatctatttagggcacctctcccgt
gggtccccgccaccccgtgagcaccctggggtgctggggggcggccggggctcagggcgc
tgggacggagcctgcagaggctgggggaggcgcggggagccgggctttctgcgggcagtg
gggccggagaggctggcggctcgcggggtgatgagcccctgcgccggcgggtcctggcgg
cgggtctccagcctggagtcagaggtgtga
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