Cygnus atratus (black swan): 118254271
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Entry
118254271 CDS
T09349
Symbol
SPAM1
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata00531
Glycosaminoglycan degradation
cata01100
Metabolic pathways
cata04142
Lysosome
Module
cata_M00076
Dermatan sulfate degradation
cata_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
118254271 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118254271 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
cata02042
]
118254271 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
cata00536
]
118254271 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cata00537
]
118254271 (SPAM1)
Enzymes [BR:
cata01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
118254271 (SPAM1)
Bacterial toxins [BR:
cata02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
118254271 (SPAM1)
Glycosaminoglycan binding proteins [BR:
cata00536
]
Heparan sulfate / Heparin
Enzymes
118254271 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cata00537
]
Enzymes
118254271 (SPAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
118254271
NCBI-ProteinID:
XP_035415273
EnsemblRapid:
ENSACYG00000008591
LinkDB
All DBs
Position
1:complement(23474468..23479944)
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AA seq
572 aa
AA seq
DB search
METLRQIQSFGIRVTCMYPIASGMVFATVLVSCCSSLNIRARPLISNSPFLSIWNAPTEL
CTERTGVHLDMTFFSLIGSTLKTSIGQNITLFYPDRLGYYPYKNEITGEAFNGGLPQLLQ
LENHLKKAKEDIQFYIPSDEQFGLAVIDWENWRPVWIRNWGSKDIYRQESIELVQQRDVS
LSEAEARTIAKMEFEAAAKSIMLESLKLGIAMKPKRLWGYYLYPDCYNYDYKQNPHNYTG
TCLDIEIARNNELNWLWEKSTALYPSVYLETALRSSRNAQLFVRNRVREAIRVSYVSNST
YPLPVFVYTRPVFTDVYEEYLSQDDLVNTIGESAALGASGIVIWGDMNLTQSKNTCKTLD
NYLRRTLTPYLINVTMAARICSQVLCQDSGACARKKWNSSDYLHLNPENIVIRMTKDGKY
TLQGQPAFQDLQTFIEKFDCHCYAGHTCEPRVNINDIQYLHACISEDICIQISSNSLSNI
EASDEKILSNRTVFSLTSQSKVTLSTHPEIEAFQPDIGNNILHITAAEYNTVTAATIYDV
EANDTRTFSSSSPYKIRMFNLLCLILIFRTLI
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggaaactctaagacaaatacaaagttttggaatccgtgttacttgtatgtatcccata
gcatccggtatggtgttcgccactgttctagtttcttgctgctcatctctgaacataaga
gctcgtccacttatttctaattcaccattcctttctatctggaatgctcctacagaactt
tgtactgaaaggactggagtgcatctggatatgacatttttttctctcattggaagcaca
ttgaagacatccatcgggcaaaatattactctattctacccagacaggcttggttattat
ccttacaaaaacgaaatcacaggagaggcattcaatggaggactcccccaactcttgcag
ctggagaatcatttaaaaaaagccaaagaggacattcagttctatattccttcagatgaa
cagtttggattggctgtcattgactgggaaaactggagacctgtgtggataaggaattgg
ggatcaaaagacatttatagacaggaatccattgaacttgttcagcagagagatgtaagt
ctatcagaagctgaagccaggactatagctaaaatggaatttgaagctgcagcaaaatct
attatgttggagtctttgaagctgggcatagcaatgaaaccaaaacgtctatggggatac
tacctttacccagactgttataactatgactacaaacaaaacccacataattatacagga
acctgtttggatattgaaatagcaagaaataatgagcttaattggttgtgggagaaaagc
acagcactttatccatctgtctatctagagacagccttaagatcttccagaaatgcccaa
ctctttgttcgcaacagagttcgagaagccattagagtttcgtatgtctccaattctact
tacccccttccagtttttgtatatacacgaccagtgttcacagatgtctatgaggaatat
ctctctcaggatgacctggtaaataccattggagaatctgctgcactgggtgcttctgga
attgtgatctggggcgatatgaatttaacacaaagtaagaacacctgtaagactctggac
aactaccttaggaggactttgactccttacctcatcaatgtcacaatggcagccagaatc
tgtagccaagtattatgccaagattctggtgcctgtgcacggaaaaaatggaattccagt
gactatcttcacttgaaccccgagaatattgtcattcgaatgacaaaagatggaaaatac
actttacaggggcaaccagcatttcaggatctacaaacattcatagaaaaatttgactgc
cactgttatgcagggcacacttgtgaacctcgagttaatatcaatgacatccaatacctc
catgcttgcatttcagaagatatttgcattcagatatcctcaaattcactttctaatata
gaagcttctgatgaaaagatcctgtctaacaggaccgtattttcacttacctctcagagt
aaggtgacattatctacacatcctgaaatagaagccttccaacctgacattggaaataat
attctccatataactgctgcagaatataacactgtcacggctgccactatatatgatgta
gaagcaaatgacactcgtactttcagtagttcttcaccctataaaataaggatgtttaat
ctgctctgtttaattctgatttttagaaccttaatataa
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