Cygnus atratus (black swan): 118254276
Help
Entry
118254276 CDS
T09349
Name
(RefSeq) hyaluronidase-1-like
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata00531
Glycosaminoglycan degradation
cata01100
Metabolic pathways
cata04142
Lysosome
Module
cata_M00076
Dermatan sulfate degradation
cata_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
118254276
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118254276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
cata02042
]
118254276
00536 Glycosaminoglycan binding proteins [BR:
cata00536
]
118254276
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cata00537
]
118254276
Enzymes [BR:
cata01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
118254276
Bacterial toxins [BR:
cata02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
118254276
Glycosaminoglycan binding proteins [BR:
cata00536
]
Heparan sulfate / Heparin
Enzymes
118254276
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cata00537
]
Enzymes
118254276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
DL-JAG_EGF-like
JAG1-like_EGF2
EGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
118254276
NCBI-ProteinID:
XP_035415280
EnsemblRapid:
ENSACYG00000008413
LinkDB
All DBs
Position
1:complement(23540804..23549588)
Genome browser
AA seq
478 aa
AA seq
DB search
MVLWIKWLAVTALLAVAGAQLRKQAQAPLLLHKPFIVVWNAPTEQCRLRYKVDLDLSIFD
ITSNTNETLSGSNVTIFYHTHLGYYPYYSDNGDPVNGGVPQNESIIKHLNKAKSDIDYCI
PMKKFQGLAVIDWENWRPQWDRNWGSKSIYRNKSLEMVRRQHPQWSEDKIRKVAKEEFEN
AGKSFMNNTILLAEHMRPNGLWGFYLYPDCYNYDYKEHPQTYTGKCPAIESSRNDLLLWL
WKESTALYPSVYLDYVLKSSPNALKFVHYRVKEAIRIASIARKDYVLPVFVYSRPFYAYT
FHVLTETDLVNTIGESAALGAAGVVLWGSMQYASSKESCSTVKRYIDGPLGHYVINVTSA
AKLCSKVLCKKNGRCIRKNSDSSAYLHLPPTNFKIRVRHSGRGPRLQVTGKPSLENIEAM
RQRFMCQCYQGWTGIFCELPDQRLKEHWAHIVLSRSRKQKLYVFLLGAMQLLLLYTAY
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggttctttggatcaaatggctggcagtcacagcactgcttgcagtggctggtgctcag
ctgcggaagcaggcgcaggcccccctgctcctgcacaagcccttcatcgtggtgtggaac
gcgcccaccgagcagtgcaggctgcgctacaaggtggacctggatctcagcatttttgac
attacgtccaacaccaacgagactctgagtggatcaaatgtcacaatcttctaccacact
catttgggatactatccatactactcagataatggagatcctgtgaacggaggggtgcct
caaaatgaaagtattatcaagcaccttaataaagcaaagtctgacattgactattgcata
cccatgaagaaatttcagggccttgcagtcattgactgggaaaactggagaccccagtgg
gacaggaactggggcagtaaaagcatttacagaaataaatctcttgagatggtaaggcga
cagcatcctcagtggtcagaggacaaaattaggaaagtagctaaagaggaatttgaaaat
gctggcaaaagtttcatgaacaacaccatccttctggctgaacacatgaggccaaacggt
ttgtggggtttctatctttacccagactgctacaattacgattacaaagagcatccgcaa
acatacacaggaaaatgcccagccattgagtcttcccgcaatgatctcctgctgtggctg
tggaaggaaagtactgctctctacccttcagtatacctggattatgtactgaagtcaagt
ccaaacgcactaaaatttgttcactatcgggttaaggaggcaatacgtattgcctcaatt
gctagaaaggactatgttttgcccgtttttgtttattctagaccattttatgcctatact
tttcatgttttaacagagactgatctggtcaacaccattggtgaaagtgcagctttggga
gcagctggagttgttctctggggcagtatgcaatacgccagctcaaaggagagctgttca
actgtgaaacgatatattgatggacccttgggacattatgtcattaatgtgacctcagca
gccaaactctgtagcaaagtcctgtgcaagaagaacggaagatgtatccgcaaaaacagc
gactcttccgcttacctccatttgccacccactaactttaagattcgagtccgtcactca
gggagaggcccaagattgcaggtgactggtaaaccgagcctggagaatatagaagccatg
aggcagaggttcatgtgccagtgttaccaaggatggacgggaatattttgtgagttgcct
gaccaaaggctaaaggagcactgggctcacattgtgttgagtagatcgagaaaacaaaag
ctttatgtcttcctcttaggagccatgcagcttcttctgctttatactgcatactaa
DBGET
integrated database retrieval system