Cygnus atratus (black swan): 118255082
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Entry
118255082 CDS
T09349
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cata02000
]
118255082 (SLC6A4)
Transporters [BR:
cata02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
118255082 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
118255082
NCBI-ProteinID:
XP_050570740
EnsemblRapid:
ENSACYG00000012594
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Position
20:complement(7347121..7370073)
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AA seq
670 aa
AA seq
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MEKKATSNETQLLTSKKDVSGCNEEDDCRENELLIRNPKSALRLVEDGNKVHPSQGDKEE
AAPISNGYSGVQSSGPCNGMGEVEDAQCTAPAATTTTTTTTSTTCRAEGQQQLMELEDRE
TWSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLVSSFTTELPWTSC
TNAWNTGNCTNYFSKDNVSWTLYSISPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCMTSFVSGFVIF
TVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEFPHVWSKRRELFVLGLIIICFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAVAVAWFYGITQFCNDVKEMLGFAPGWYWRVCWVAISPIFLLFVTCSFLSNP
PELRLFDYNYPYWTTVVGYCIGTSSIICIPIYMVYRLIVTPGTLKERILKSITPETATEI
PIGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggcaacgagcaatgagactcagctgctgacttccaagaaagatgtctca
ggctgcaatgaagaagacgactgcagagagaacgaacttctgatcaggaaccctaaatct
gccctgcggctagtggaggatgggaacaaagtccatcccagccagggagataaggaggag
gcagctccgatctcaaatggctattcaggggttcagagctctggtccttgcaatgggatg
ggagaggtggaagatgcccagtgcactgctcccgcagccacgaccaccaccacaaccacc
acctccaccacctgcagagctgagggccagcagcagctgatggagctggaagacagagag
acctggagcaaaaaaattgactttctactctctgtcatcgggtatgcagtggatctggga
aacgtgtggagatttccttacatatgctatcaaaacggaggaggagcattcctcattccg
tacacaatcatggccatctttggaggtattcctctcttctatatggaactagcgttagga
cagtaccacaggaatgggtgcatctcaatctggagaaaaatatgtcccattttcaaagga
attggctttgccatctgtataattgatctttacgtggcctcctactacaacaccattatg
gcgtgggccttttactacctcgtgtcctccttcacgacggagctgccgtggaccagctgc
acaaacgcctggaacacaggcaactgcacgaactacttcagcaaggacaatgtcagctgg
accctgtactccatctctcctgcagaagaattttatacccgccaagttctacaggtgcat
aggtccaatgggctggatgacctggggggcattagctggcaattgaccctctgtttattg
ttaatcttcaccattgtatacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtgtgggtgactgccacattcccatacatcatcctctttatcctgctagtgagaggtgca
actctgcctggagcctggagaggtgtcctctactacctgaaacctgactggcagaaactc
ctggccactgaggtttgggtagatgcagcagctcagatttttttctcccttggtccaggt
tttggggtcttattggcttatgccagctacaacaagttccataacaactgctaccaagac
gctctggttaccagtaccgtgaactgcatgactagttttgtgtctggatttgtcattttc
actgtgctgggatacatggctgagatgaggaatgaagatgtatcagaagttgccaaagac
actggacccagtctgctcttcattacctacgccgaggccattgcaaacatgcctgcttca
actttctttgccatcatatttttcctgatgttactcacgctgggattagacagcacgttt
gcaggactagaaggagtgattactggagtactggatgaattccctcatgtctggagcaaa
cgcagggaattgtttgtccttggtctgatcatcatttgctttttgggctcattagcaacc
ctgacatttggaggcgcatatgtggtgaagctgtttgaagagtacgccaccggcccagct
gtcctgacagtggtgttcctggaagcagttgctgtggcttggttctacggcatcacccag
ttttgcaacgatgtgaaggaaatgctcggctttgccccaggctggtactggcgagtttgc
tgggtagcaattagccccatcttccttttgtttgtcacttgcagctttctgtccaaccct
cctgagctacgactttttgattataattacccctactggaccacagtggtgggttattgc
ataggaacctcttctatcatctgcattccgatctacatggtttatcggctgatcgtcact
ccaggaacactgaaggagcgtattctgaaaagcatcactccagaaacagctacagaaatt
cctattggagacatccgcatgaatgcagtttaa
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