Cygnus atratus (black swan): 118258319
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Entry
118258319 CDS
T09349
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata00310
Lysine degradation
cata01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118258319 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118258319 (PRDM6)
03036 Chromosome and associated proteins [BR:
cata03036
]
118258319 (PRDM6)
Enzymes [BR:
cata01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
118258319 (PRDM6)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118258319 (PRDM6)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118258319 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
118258319
NCBI-ProteinID:
XP_035422921
EnsemblRapid:
ENSACYG00000016382
LinkDB
All DBs
Position
Z:complement(64529537..64604333)
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AA seq
571 aa
AA seq
DB search
MLKPGEPGGSAFLKVDPAYLQHWQQLFPQSGQLKSAGALAQLQPPERAEPPADSLRQRPA
SLSSASSSSSSSTPSSSSTSSCAAAAAASLAGLSALPVAQLPVFAPLQSSEPPAGGAPAP
QQGKDLCGAGGTKCGERPAARFRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCAD
NRNGECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGICA
AQRIQQGTWIGPFQGVLLLPEKVQAGAIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMR
YIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDEN
LNVPSTVMEAMSRQDTLQPFNKNSKLSPATPQRSVVFPQTPCSRNFSLLDKSGSIESGFN
QISVKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCG
HCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCER
SFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggcgagcccggcggctcggcgttcctcaaggtggatcccgcctatctg
cagcactggcagcagctcttcccgcagagcggccagctcaagagcgccggggccctcgcc
cagctccagccgcccgagagagccgagcccccggctgacagcctccgccagcgcccggcc
tccctctcctccgcctcctcctcctcttcctcgtccaccccgtcttcctcctccacctcc
tcctgcgccgccgccgcggccgcgtccctggccggcctgagcgccctgcccgtcgcccag
ctgccggtcttcgctccgctgcagagctccgagcccccggccgggggagcgcccgctccc
cagcagggcaaggacttgtgcggggctggcggcaccaaatgcggcgagcgcccggccgcc
cggttccgctgcacggccgaggagctggactactacctgtacgggcagcagcgcatggag
atcatccccctcaaccagcacaccagcgaccccaacaaccggtgtgacatgtgtgccgat
aaccgcaatggcgagtgccccatgcatgggcccctccactccctgcggcgtctggtgggc
accagcagtgccgcagcagcggcccccccgcccgagatccctgagtggctgcgggacctg
ccgcgggaggtgtgcctgtgcaccagcacggtgcctggtctggcctacggcatctgcgcg
gcgcagcggatccagcagggcacctggatcgggcccttccagggagtcctgctcctgccg
gagaaggtccaagcgggagccatcaggaacactcagcatctctgggaaatatatgaccaa
gatgggacactgcagcactttattgatggcggagaacccagtaagtcaagctggatgagg
tacatccgatgtgcaaggcactgcggggaacagaacttaacagtggttcagtacaggtca
aatatattctaccgggcttgtatagatatcccacggggtacagagctattggtgtggtac
aatgacagctacacatctttctttggaatccctctccagtgcatcgcacaagatgaaaat
ttgaatgtcccttcgactgtaatggaggccatgtccagacaagacaccctacagccattt
aataaaaatagcaaactatcccctgccactccacagcgatccgtagtatttccacagact
ccgtgtagcagaaatttttctctcctggataagtctgggtccatcgagtcaggatttaac
cagatcagtgtcaaaaaccaacgagttcttgcaagcccaacttcaacaagccaactaaat
tctgagttcagtgactggcatctttggaaatgtgggcaatgttttaagactttcacccag
cggatcctcttacagatgcatgtgtgtacgcagaaccctgacaggccctaccagtgcggc
cactgctcccagtctttctcgcagccatcggagctgaggaaccacgtcgttacgcactcc
agtgacaggcctttcaagtgtggctactgcggccgggcctttgctggtgctactacactc
aacaaccacatccggacacacactggggaaaagcccttcaagtgcgagaggtgtgagagg
agcttcacacaagccacccagctgagtcgacaccagaggatgcccaatgagtgcaagcca
ataacagagagcacagaatcaattgaagtggattaa
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integrated database retrieval system
