Cercocebus atys (sooty mangabey): 105573890
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Entry
105573890 CDS
T07242
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
caty
Cercocebus atys (sooty mangabey)
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caty04040
]
105573890 (SCN11A)
Ion channels [BR:
caty04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105573890 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
105573890
NCBI-ProteinID:
XP_011889628
Ensembl:
ENSCATG00000040001
LinkDB
All DBs
Position
Unknown
AA seq
1790 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTSDSLAAIEKRIAIQKEKDKSKDKTGEVPHLRPQLDLKASR
KLPNLYGDIPRELIGKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNSIRS
LAIRVSVHSLFSMFIIGTVIINCVFMATGPAKNSNSNNTDIAECVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSIVIGIAIVSCIPGITIKLLSLRTFRVFRALKAISVVSRLK
VIVGALLRSVKKLVNVIILTFFCLSIFALVGQQLFMGSLNLKCISRDCKNISNLEAYDHC
FEKKENSTEFKMCGIWRVNSSCSKQYECNHTKINPDYNYTNFDNFGWSFLAMFRLMTQDS
WEKLYQQTLRTAGLYSVFFFIVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAEIEAKEKM
FQEAQQLLKEEKEALVAMGIDRSSLTSLETSYFTPQKRKLFGNKKRKSFFLRESGKGQPP
GSDSDEDSQKKPQLLEQTKRLSQNLSLDHFDEHRDPLQRQRALSAVSILTITMKEQEKSQ
EPCLPCGENLASKYLVWNCCPPWLCIKKVLRTVMTDPFTELAITICIIINTVFLAMEHHK
MEPSFEKMLNTGNLVFTSIFMAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFADVVNIF
QNTSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ
LFGHRFNSQKSAKLCNPTGPTVSCLRHWHMGDFWHSFLVVFRILCGEWIENMWECMQEVN
ASSSLCVIVFILITVIGKLVVLNLFIALLLNSFSNEERNGNLEGQARKTKVQLALDRFRR
AFCFVRHTLEHFCHKWCRKQKLPKQKEVTGGCAAQSKDIIPLVTEMKRGSETQEELGILT
SVPKTLGIRHDWTWLAPLAEEEDDAEFSGEDNAQPITQPEAEQQAYELHQENEKPTSQGV
QNVEIDMFPEDEPHLTIQDPRKKSDVTSILSECSTIDLQDGFGLLPEMVPEKQPERCLPK
GFGSCFPCCSMDKRKPHWVIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLK
DQPKIQELLNCTDIIFTHIFILEMVLKWVAFGFGKYFTSAWCCLDFIIVIVSVTTLINLK
ELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVHFFS
GKFGKCINGTESVINYTIIANKSQCESGNFSWINQKVNFDNVGNAYLALLQVATFKGWMD
IIYAAVDSREKEQQPEFESNSLGYIYFVVFIVFGSFFTLNLFIGVIIDNFNQQQKKLGGQ
DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDVVTSQIFDIIIISLIILNMI
SMMAESYDQSKAVKSTLDHLNWVFVVIFTLECLIKIFALRQYYFTNGWNLFDSVVVLISI
VSTMISTLESQEYIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIG
LLLFLIMFIYAILGMNWFSKVNPESGIDDIFNFKTFSGSMLCLFQISTSAGWDSLLSPML
RSKESCNSSSENCHLPGIATSYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGED
DFDIFYEVWEKFDPEATQFIEYSALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGDRLH
CMDILFAFTARVLGGSDGLDSMKAMMEEKFMETNPLKKLYEPIVTTTKRKEEERCAAVIQ
KAFRKYMMKVTKGDQGDQSDLENRPHSPLQTLCNGDLPSFGVAKGKVHYD
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtaatctttccagatgagcggaatttccgccccttcact
tctgactctctggctgcaattgagaagcggattgccatccaaaaggagaaagataagtct
aaagacaagacaggagaagtaccccatcttcggcctcagcttgacctaaaggcctccagg
aagttgcccaatctctatggcgacattcctcgtgagctcataggaaagcccctggaagac
ctggacccattctacagaaatcataagacatttatggtgttaaacaaaaagaggaccatc
taccgcttcagtgccaagcgtgccttgttcatttttgggcctttcaattcaatcagaagt
ttagccattagagtctcagtccattcattgttcagcatgttcataatcggcactgttatc
atcaactgcgtgttcatggctacagggcctgctaaaaacagcaacagcaacaatactgac
atcgcagagtgtgtcttcactgggatttatatttttgaagctttgattaaaatattggca
agaggtttcattctggatgagttttctttccttcgagatccatggaactggctggactcc
attgtcattggaatagcgattgtgtcatgtattccaggaatcaccatcaaactgttgtcc
ctgcgtaccttccgtgtgttcagagctttaaaagcaatttcagtagtttcacgtctgaag
gtcatcgtgggggccttgctgcgctctgtgaagaagctggtcaatgtgattatcctcacc
ttcttttgcctcagcatctttgccctggtaggtcagcagcttttcatgggaagcctgaac
ctgaaatgcatctcgagggactgtaaaaatatcagtaacctggaagcttatgaccattgc
tttgaaaagaaagaaaattcgactgaattcaaaatgtgtggcatctggagggttaacagt
tcctgttccaaacaatatgaatgtaaccacaccaaaattaatcctgactataattatacg
aattttgacaactttggctggtcttttcttgccatgttccggcttatgacccaagattcc
tgggagaagctttatcaacagaccctgcgtactgctggactctactcagtcttcttcttc
attgtggtcattttcctgggctccttctacctgattaacttaaccctggctgttgttacc
atggcgtatgaggagcagaacaagaatgtagctgcagagatagaagccaaggaaaaaatg
tttcaggaagcccagcagctgttaaaggaggaaaaggaggctctggttgccatgggaatt
gacagaagttcacttacttccctcgaaacatcatatttcaccccccaaaagagaaagctc
tttggtaataagaaaaggaagtccttctttttgagagagtctgggaaaggccagcctcca
gggtcagattctgatgaagattcccaaaaaaagccacagctcctagagcaaaccaaacga
ctgtcccagaatctatcactggaccactttgacgagcatagagatcctctccaaaggcag
agagcactgagtgctgtcagcatcctcaccatcaccatgaaggaacaagaaaaatcacaa
gagccttgtctcccttgcggggaaaacctggcatccaaatacctcgtgtggaactgctgc
cccccgtggctgtgcattaagaaggtcctgagaactgtgatgactgatccatttactgag
ctggccatcaccatctgcatcatcatcaacactgtcttcttggccatggagcatcacaag
atggagcccagttttgagaagatgttgaatacagggaatttggttttcactagcattttt
atggcagaaatgtgcctaaaaatcattgctctcgatccctaccactactttcgccgaggc
tggaacatttttgacagcattgttgctcttctgagttttgcagatgtagtgaacatcttt
caaaatacaagctggccattcttgcgttccttcagagtgctcagggtcttcaagttagcc
aaatcctggccaactttgaacacgctaattaagataatcggcaactctgtcggagccctt
ggaagcctgactgtggtcctggtcattgtgatctttattttctcagtagttggcatgcag
ctttttggccataggttcaattctcaaaagagtgcaaaactctgtaacccgacaggcccg
acagtctcatgtttacggcactggcacatgggggatttctggcactccttcctagtggtg
ttccgcatcctctgcggggaatggatcgaaaatatgtgggaatgtatgcaggaagtgaat
gcatcgtcatcattgtgtgttattgtcttcatattgatcacggtgataggaaaacttgtg
gtgctcaacctcttcattgccttactgctcaattcctttagcaatgaggaaagaaatgga
aacttagaaggacaggccaggaaaactaaagtccagttagcactggatcgattccgccgg
gctttttgtttcgtgagacacactcttgagcatttctgtcacaagtggtgcaggaagcaa
aagttaccgaagcaaaaagaggtgacaggaggctgtgctgcacaaagcaaagatatcatt
cccctggtcacagagatgaaaaggggctcagagacccaggaggagcttggtatactaacc
tctgtaccaaagaccttgggcatcaggcacgactggacttggttggcgccacttgcagag
gaggaagatgatgctgaattttctggtgaagataatgcacagcccatcacacaacctgag
gcagaacaacaggcctatgagctccatcaggagaacgagaagcccaccagccagggagtt
caaaatgtggaaattgacatgttccctgaagatgagcctcatctgaccatacaggatccc
cgaaagaagtctgatgttaccagtatactatcagaatgtagcaccattgatcttcaagat
ggctttggattgttacctgagatggttcccgaaaagcaaccagagagatgtttgcccaaa
ggctttggttcctgctttccatgctgtagcatggacaagagaaagcctcactgggtcatt
tggtggaacctgaggaaaacctgctaccaaatagtgaaacacagctggtttgagagcttt
attatctttgtgattctgctgagcagtggggcactgatatttgaagatgttcaccttaag
gaccaacccaaaatccaagaattactaaattgtactgacattatttttacacatattttt
atcctggagatggtactaaaatgggtagcctttggatttggaaagtatttcaccagtgcc
tggtgctgccttgatttcatcattgtgattgtctctgtgaccaccctcattaacttaaag
gaattgaagtccttccgaactctgcgagcactgaggcctcttcgtgcgctgtcccagttt
gaaggaatgaaggtggtggtcaatgctctcataggtgccatacctgccattctgaatgtt
ttgcttgtctgcctcattttctggctcatattttgtattctgggagtacacttcttttct
ggaaaatttgggaaatgcattaatggaacagagtcagttataaattataccatcattgca
aataaaagtcaatgtgaaagtggcaatttctcttggatcaaccagaaagtcaactttgac
aatgtgggaaatgcttacctcgctctgctgcaagtggcaacatttaagggctggatggat
attatatatgcagctgttgattccagagagaaagaacagcagccagagtttgagagcaat
tcactcggttacatttacttcgtagtttttatcgtctttggctcattcttcactctgaat
ctcttcattggtgttattattgacaacttcaaccaacagcagaaaaagttaggtggccaa
gacatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaattaggatcc
aaaaaacctcaaaaacctattccacggcctctgaacaaatgtcaaggtcttgtgttcgac
gtagtcacaagccagatctttgacatcatcatcataagtctcattatcctaaacatgatt
agcatgatggctgaatcatacgaccaatctaaagctgtgaaatccacccttgaccatctc
aactgggtctttgtggtcatctttacattagaatgtctcatcaaaatcttcgctttgagg
caatactacttcaccaatggctggaatttatttgactctgtggtggtgcttatttctatt
gttagtacaatgatttctaccttggaaagtcaggagtacattcctttccctccgacgctc
ttcagaattgtccgcttggctcggattggccgaatcctgaggcttgtccgagctgcacga
ggaatcaggactctcctctttgctctgatgatgtcgctcccttctctgttcaacattggt
cttctactctttctgattatgtttatctatgccattttgggcatgaactggttttccaaa
gtgaatccagagtctggaattgatgatatattcaacttcaagacttttagcggaagcatg
ctgtgtctcttccagataagcacatcagcaggttgggattccctgctcagccccatgctg
cgatcaaaagaatcatgtaactcctcctcagaaaactgccacctccctggcatagccaca
tcctactttgtcagttacattatcatctcctttctcattgttgtcaacatgtacattgct
gtgattttagagaacttcaatacagccactgaagaaagtgaggaccctttgggcgaagat
gactttgacatattttatgaagtgtgggaaaagtttgacccagaagcaacacaatttatc
gaatattctgccctttctgactttgctgatgccttgcctgagcctttgcgtgtggcaaag
ccaaataaatatcaatttctagtaatggacttgcccatggtgagtggagatcgcctccac
tgcatggatattctttttgccttcaccgctagggtacttggtgggtctgatggcctggat
agcatgaaagcaatgatggaagagaagttcatggaaaccaatcctctcaagaagttgtat
gaacccatagtcaccaccaccaagagaaaggaagaggaaagatgtgctgcagttattcaa
aaggcctttcgaaagtacatgatgaaggtgaccaagggtgaccaaggtgaccaaagtgac
ttggaaaacaggcctcattcaccactccagactctttgcaatggagacttacctagcttt
ggggtggccaagggcaaggtccactatgactga
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integrated database retrieval system
