KEGG   Carassius auratus (goldfish): 113038604
Entry
113038604         CDS       T07313                                 
Symbol
polq
Name
(RefSeq) DNA polymerase theta isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
caua  Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:caua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caua03400]
    113038604 (polq)
Enzymes [BR:caua01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     113038604 (polq)
DNA repair and recombination proteins [BR:caua03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    113038604 (polq)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 zf-NOSIP
Other DBs
NCBI-GeneID: 113038604
NCBI-ProteinID: XP_026051945
Ensembl: ENSCARG00000070135
UniProt: A0A6P6IW25
LinkDB
Position
21:14270837..14285291
AA seq 2623 aa
MTTSTTRKIYLGQHRIVKTKGLIIADEKPHRQSSRLHQACSSATDISENRRYNEPKENQN
KQWMAGDPTLAMDVEILQAIDELGPEVLKFKKDENFQQTESASLKKTSEFPQNICEQQVQ
NGENINPSSPGSALSPTERRRTRTQAKKENDWRDLAQKLLFSETKMTEAGGRARGHEIKC
DKEYSSPQKIINSMKKTPKVANSKQKLNFRRDTSPNDSLSTSKDYILFSPTHMAAAKERS
MLHQQRSMKNLSVSVLTPPPGLDLSVLGDATLPDAAQSIHMGRPADQSDKLLLSNWGLPN
LVLEKYQSLGVQRMFEWQAECLTLGKVLEGQNLVYSAPTSAGKTLVSELLILKRVLETRQ
KAMFILPFVSVAREKMFYLQNVFQEAGVRVEGYMGNTSAAGGFSALDVAVCTIEKANGLI
NRLIEEDKLNLLGIVVVDELHMVGDSGRGYLLELLLTKIQYIGQKNTARGSVQNASAGVQ
IVGMSATLPNLDLLAHWLNAELYSTNYRPVPLMEWVKIGTNVYDGSMNLIRQFTPALPVK
GDDDHIVSLCFETVQDGHSALLFCPSKNWCEKLADSIGREFYNLHHKEMQSGSGVQSISL
NQEGLQDVVAQLKRAPAGLDQVLQRTVPWGVAFHHAGLTFDERDILEGAFRQGYIRVLAA
TSTLSSGVNLPARRVIIRTPVFNGHLLDILTYKQMVGRAGRKGVDTIGESVLVCKEAERA
KGISLIQGTLKPISSCLVKREGEGVTTSMLRAILEIIVGGVASSPQDVRMYASCTLLAAS
IAAEQPREEEAETEARNKGAIEACIEWLMDNEFIHIQTEGDVERYCPTHLGSATLSSSLS
PPEALGIFADLQRAMKGFVLENDLHILYQITPVYVDWTTIDWYQFFCLWEQLPSAMKRVA
EMVGIQEGFLARSVGGKLIAKTEKQRRQMAIHKRFFTTLVLHELISEEPLGAVAKKYGCS
RGQLQSLQQSASTYAGMVTVFCNRLGWHNLELLLSQFQSRLSFGVQRELCDLVRISLLNA
QRARTLHSSGFVTVAEVARADVPELEKALRKAIPFKSSRQAVDESEAEAQERKSMRCIWV
SGKKALTEREAAQQIVAEAQLLLQQDLALLGVEWNPASLATKTQLDSHSTEESANEKPLP
SMSRCPELEEGQNITNVDKQKLLVGENSDSCSHPPLRTLEITTNSEKPVDIDSGVSSADC
QPAKKCEQQSSTLHKVLKSINAKDKGCQNTQTAESSDCSSKSLQKKIGHNTCIKSACNSG
SDHRVSPVSKRRRMDVVDADALPTVSESKTPPLISKDPKLISNVEELCFNKPETDCKIDK
DKVNIQPFTAGLNQVIESKTHSYDPKKGGETQNVTAKKCTSKTKHLTQNKKRETVTHSFG
TTSSRDETVQVKHDLVCCSVKLSKLSSPDLYTNGMEEFGDSFQLDTQTEKMLQGDDGIGN
LNILKESNKHVDSESERKVINKSSFLENVNQDQNKDPVNGLSPHKIGLATEFKPKYNISL
TDSQLENILNYSNQVTEEESSSNKPAEQRENHESSDQITDNSFNRSSSFLFDSLYDNSIL
DAMEEAAMDRDNEEEQVVEARANSNASSPELIPERRDAVSTEDLEAIQWGESSFNLSEWG
DSLLIGEQYLDKINSAVKAGDGPRLGAEKPSYTDDIVSELHVSQSNEPLSRVSAERRQLN
SSSFHISPGMQDIFDKWSDQFLTLSEIPGQSNSTVVEPNAAAAVVEKAVASVTNSGIYQG
GPRNSKTEDFVLVPAKPVTHNDLIPPTPVSEPVTPRVKMTTSAIQSPLNVTKHRSELDPN
SISSSQKVYQSCLRTNTASDLDMSLADEGFMRLSQCQSLPASNSCSPETFSIIDVASDIR
LFHTFIKEWKTKDRFSFALACEKIDNTSVQTETVIGGKFKKPTTPVRKRKDGFFLKGYED
LVVIGISVCWGSKDAYFVSLQKELSDTDISASLAPPPLDETLTVEERLKQIKCCLGKESV
IVSYDFIHVYKTLLLACELAMRGTFEDPKIACWLLDSSSKERTLHNMVSSFATEDLLMLE
GISPGQGVQSLGIYGDSSQPGRYRAAVESVLVFRVMTQLNCLLEKDGFLDVFRKVEMPTQ
YCLALLELNGIGFSVAECEAQKHVMQAKLSALESQAYQLAGHSFSLTSPEDVAEVLFLEL
KLPPNGDLNALKNKKTLGYTRRAGARIKLSKQFSTTKDVLEKLKPLHQLPSVILEWRRIT
NALTKVVFPLQREKKWHSLLKMDRIHPVSQSHTATGRVSFTEPNIQNVPKDFEIQMPTLI
EESQPSQNGASKTWGKRLKMNRQLAPLLKVSDESPEKGMPFSVSMRHAFVPFSGGLILAA
DYSQLELRILAHLSRDRRLLHVLNSGEDVFKSIAAEWKMVDPASVDDNMRQQAKQICYGI
IYGMGAKSLGEQMGIDENDAACYIETFKSRYTGIQNFLRETVQKCGKNGYVQTLLGRKRF
LPGIKDTNVYIKSHAERQAVNTTVQGSAADIVKLATINIQRRLEAAFPGVPTSHQHPPIR
LSGRHRNQCRPSRGGFFILQLHDELIYEVAEEDVIQVIGKTSLIIACTLDCKQSSVVISL
TVMFLQVAQIMKREMESVVKLYVKLRVKVKVGPSWGKLQDLDI
NT seq 7872 nt   +upstreamnt  +downstreamnt
atgactacttcaacgacaagaaagatttatttgggacagcatcggattgtaaagacaaag
ggcttaattattgcagatgagaaaccacatagacaatcaagtcgcctgcatcaagcatgt
tcctctgcaacggatatatctgagaacagaagatataatgagcctaaagaaaaccagaat
aagcaatggatggcaggagaccccactctggcgatggatgtggaaattttacaagctatt
gatgaactgggtccagaagtcttgaaattcaaaaaagatgaaaactttcaacaaactgaa
tcagcatcgcttaaaaaaacctctgaatttccacaaaatatttgtgagcaacaagtgcaa
aatggagaaaacatcaacccttcaagtccaggctcagcgttgtcaccaacagagcgcaga
agaaccagaacacaagccaaaaaagagaacgactggagggatttggcccaaaagctattg
ttcagtgaaaccaaaatgactgaagcaggtggacgggcccggggccatgagattaaatgt
gacaaggaatattcttcacctcaaaagatcatcaactccatgaaaaaaacacctaaagta
gcaaacagcaagcaaaagttaaatttcagaagagataccagcccaaatgactctctcagc
acctccaaggactacattctgttcagtccgacacatatggctgctgctaaagagcgatca
atgttgcatcagcagagatcaatgaaaaacctttcagtttctgtgctaacccctcctcct
ggactggatctcagtgtcctcggtgatgctacactaccagatgcagcacaaagcatccat
atgggacgtcctgcggaccagtcagacaagcttttgctctctaattggggtctccctaac
cttgttctggagaaataccagagtcttggtgttcagaggatgtttgagtggcaggctgag
tgtctgaccttgggcaaagtgttggagggccagaacctggtgtattctgctccaaccagt
gcaggaaaaactctggtttctgagctgttaatcctgaagagagttttggaaacgagacag
aaggccatgttcattcttccttttgtgtctgtggctcgtgagaagatgttttatcttcag
aatgtatttcaggaggcaggggtcagagtggaggggtatatgggtaacacttcagcagcc
ggtgggttttcagctctggatgtagctgtttgcacaatagagaaagctaatggactcatc
aacagactcattgaagaagacaaattgaatcttcttggaattgttgtggttgatgagctg
cacatggttggggactcagggcgtggatatctgttagaacttttgcttactaaaatccaa
tacattggccaaaaaaacacagcaaggggttctgttcaaaatgcctctgctggtgtgcag
atagttggtatgagcgccacactgccaaacttggaccttcttgctcactggttgaatgct
gagctgtatagtactaactatcgtcctgtgccactgatggagtgggtcaagataggcaca
aatgtctacgatggatctatgaacctgatcagacagttcaccccagctcttcctgtaaag
ggagatgatgatcacattgtcagcctctgctttgagacggtgcaggatggacactctgca
ctgctgttctgcccttcaaagaactggtgtgagaaactagcagacagcattggaagagag
ttttacaatcttcatcacaaagaaatgcagtcaggctctggagtgcagagtatatctctg
aatcaggaaggtctccaggatgttgtagctcagctcaagcgtgctcctgcaggcttggac
caggtgctccagcgaacggttccctggggggtggccttccaccatgcaggtctgacattt
gatgagagagatattctagaaggtgcttttcgtcaaggatacattagggtgctagctgcc
acctccaccttgtcgtctggtgtaaatctgcccgcccgtcgtgtgattatcagaacccct
gtctttaatggtcatttgttggacattctaacctataagcagatggtgggacgagcaggc
cgtaaaggagtggacactataggtgagagtgtgttggtctgtaaagaggctgaacgtgcg
aagggcatcagcctcatccagggcacactcaagcctatcagcagctgcctggtgaagcgg
gagggtgagggcgtcactaccagcatgctcagggccatcctcgagatcatcgttggagga
gtcgccagctcaccacaggatgtgaggatgtatgcttcttgcactcttctcgcagccagt
attgcagctgaacagccacgtgaggaagaagctgaaacagaagctcgaaacaagggggct
attgaagcctgcatagagtggctgatggacaatgagtttatacatatacagacggaggga
gatgtggagaggtactgccccacgcatctgggttctgccactctgtcctcatctttatca
cccccagaagccctggggatttttgcagatctccaaagagcaatgaaaggatttgtgttg
gaaaatgatctccatatcctctatcagataacacctgtgtatgtggactggactactatt
gactggtaccaattcttctgtttgtgggaacaactaccgtctgcaatgaaacgggtggct
gagatggtgggcatccaagaaggtttcctggcccgctccgttggtggcaaattaattgct
aaaaccgaaaagcaacgcagacagatggccattcacaaacgttttttcacaacattagtt
ctccatgaactgataagcgaagaaccacttggagctgtcgcaaagaagtacggctgtagc
cgaggacagcttcagtcacttcagcagtctgcctcaacatatgcaggtatggttacagtc
ttctgtaatcgacttggatggcacaatctagagctgcttctatcccagttccagagtcgt
ctgagttttggagtccagagggagttgtgtgatctggttcgtatttctttactaaacgct
cagagagcacgtacgctccacagctccgggtttgtcacagtggcagaggtggcaagagct
gatgttcctgagttggagaaggccctcaggaaagctatccctttcaaaagctccaggcag
gcagtggatgaaagcgaggcagaggctcaagaacgtaagagtatgcgctgcatctgggtc
agcgggaaaaaggccttgactgaaagggaggctgctcagcaaattgtggctgaggcccag
ctgctcctccagcaggatttggctcttcttggggtggaatggaacccagcatctctcgca
acaaaaacccagctagattcccattcaaccgaggaatcagccaacgaaaaaccactaccg
tctatgtcaaggtgtccagaacttgaagaggggcaaaatataaccaatgtggacaaacaa
aaattgttggtgggtgaaaattctgacagttgttcccatcctcctttgaggacattagag
atcactactaattcagaaaagccagtggatattgactccggtgtatcatctgctgactgt
caacctgctaaaaaatgtgaacagcaatcaagtacattgcataaagttctaaaatcaata
aatgcgaaagacaagggctgtcaaaatacccaaacagctgagtcatcggattgctcttca
aaatcacttcaaaaaaaaattggacacaatacctgtataaaaagtgcctgcaactctggc
agtgaccatcgtgtaagtccagtttcgaaacgtagaaggatggatgttgtggacgctgat
gcactacccacagtcagtgaatcaaaaacaccacctctaatctcaaaagaccctaaacta
atatcaaatgttgaagaactttgctttaataaacctgaaactgattgtaaaatagataaa
gataaggtgaatatccagccattcactgctggactgaaccaagtcattgagtcaaaaact
cactcgtatgatccaaaaaagggaggagaaacacaaaatgtcactgcgaaaaagtgcaca
tctaaaactaaacatttaactcaaaataaaaagcgagaaacagttactcacagttttggg
acaaccagcagcagagatgaaactgtccaagttaaacatgatttagtttgttgttctgtg
aagcttagcaagcttagctctcctgacttgtacacaaatggaatggaagagtttggtgat
agttttcaacttgatacacagactgaaaagatgcttcaaggggatgatggcattggtaat
ttaaacattctcaaagaaagtaacaaacatgttgattcagaaagtgagagaaaagttatc
aacaagtcatctttcctggaaaatgtgaatcaagaccaaaacaaagacccagttaatggt
ttatcacctcataagattggcctggccactgaattcaaaccgaaatataacatctcgctt
actgatagccagttggagaatattttaaattacagtaaccaggttactgaagaagaatca
agttccaataaacctgcagagcaaagggaaaatcatgagtcctctgatcaaattactgac
aacagcttcaaccggagtagcagttttctgtttgacagtctctacgacaactcaatcttg
gatgccatggaggaggcagcaatggatcgagacaacgaagaagaacaggtggttgaagcg
cgtgccaattcaaacgcctcttctccagaactcattccggagagaagagatgcagtgtca
acggaggatctggaagcaatccaatggggggaatcatctttcaatctttcagaatgggga
gattcactacttattggagaacagtaccttgataaaattaacagtgctgtcaaggctggt
gatggcccaagattgggtgcagagaagcccagttatacagatgacattgtgtctgaacta
catgtatcacaaagcaatgagcctctttcaagggtttcagctgaaagacgccaattaaac
agttcatcatttcacatcagcccaggaatgcaggatatttttgacaaatggtctgatcag
tttttaactctatctgagattccagggcagtcaaattcaacagtggtggaaccaaatgct
gctgctgctgttgtcgaaaaagctgtagcctcagttacaaacagtggaatttatcaggga
ggtccaagaaactcaaaaacagaagattttgtgttagtcccggccaaaccagtgactcac
aatgaccttattcctcccacgccagtttctgaaccagtcacaccacgagttaaaatgacc
acttcagctatacaatcacctcttaatgtcaccaagcacaggtctgaactggatccaaat
tctatatccagttcccagaaagtttatcagtcttgtttgaggacaaacacagcatcagat
ttagacatgtctctggctgatgagggctttatgaggctttctcagtgtcagtcacttcct
gcttcaaactcctgcagtccagaaacattctccataatcgatgtggcaagtgatataagg
cttttccatacatttataaaggagtggaaaacgaaggacagattttcttttgctcttgcc
tgtgaaaagatagacaacacctcggtgcaaactgagacagttataggtggaaaattcaaa
aaacctactaccccagtgaggaaaagaaaagatggcttctttcttaagggatatgaggat
cttgttgtcattggcatatctgtatgctggggatcaaaagatgcttattttgtgtctcta
caaaaggagctgtcagacacagatataagtgccagtttagctccaccacctcttgatgag
acccttacagttgaggagcgactgaagcaaataaagtgctgcttgggaaaagaatcagtg
atagtctcttatgatttcattcatgtttacaagaccctgctacttgcatgtgagcttgct
atgcgtggcacatttgaagacccaaagattgcatgctggcttctggattcaagctccaaa
gagcgcactctccacaacatggtatccagctttgctactgaggatctcctgatgctggaa
ggaattagtcctggtcagggtgtgcagagtttaggcatctatggagattccagtcagcct
ggacgctacagagctgctgttgagtctgttctggtcttcagagtcatgacgcaactcaac
tgtcttcttgaaaaggatggtttcttagacgtattcaggaaagtagagatgcccacccag
tactgcctggcattgttggagctaaatggaattgggtttagtgttgctgaatgtgaggct
caaaaacatgtgatgcaggccaagctaagtgctcttgaatcccaagcttatcagctagcg
ggacacagcttctcacttaccagtccagaggatgtagcagaggtattgtttcttgagttg
aagctgcctcccaatggagatttaaatgctctaaagaataagaagacgctgggctacact
aggagagcaggagcccgtatcaaactttccaagcagttcagtacaactaaggatgtttta
gaaaagctcaagccactgcatcagttaccaagtgttattcttgagtggagaaggatcacg
aatgcattgacaaaagtggttttccccttgcaacgagagaagaagtggcactcacttctg
aagatggaccgaatacatccagtttcacagtcacacactgccacaggtcgcgtgagcttt
actgaaccaaacattcaaaatgtccctaaagattttgaaattcagatgccaacacttata
gaagaaagtcaaccatcacagaatggtgcaagcaaaacatggggtaaacgattaaaaatg
aaccggcagttggcaccccttttaaaggtatcagacgaatcaccagaaaaagggatgcca
ttttctgtcagcatgaggcatgcttttgttcctttttcaggaggtctgattctggctgct
gactactcacagttggagctccgcattttagctcatctgtcccgggacaggcggctcctc
catgtgctcaacagtggtgaagatgtgtttaaaagcatagcagcagagtggaaaatggta
gaccctgcttcagttgatgataatatgaggcaacaagccaaacagatttgttatggaata
atctatggcatgggagcaaagtcacttggagaacaaatgggcatcgatgagaatgatgct
gcttgttatattgagacgtttaaatccagatacactggcatacagaactttctgcgtgaa
actgtgcagaaatgtgggaaaaatggttatgtgcagacgttacttggaaggaagcgtttt
ttgcctggaataaaagacacaaatgtttacataaagtctcacgcagagcgacaggcagta
aacacaaccgtccagggctctgctgctgacattgttaagttagcaaccatcaacatccag
cgcagattggaggcagcatttcctggagttcccacatcacatcaacaccctccaatcaga
ctgagtggtaggcacagaaaccagtgtagaccctctcgaggaggcttttttatacttcag
ctgcatgatgaactaatctatgaggttgcagaggaagatgtcattcaggtaattgggaag
actagtctaattattgcatgtaccttggactgtaagcaaagttcagtggtgataagtcta
acggtaatgtttttacaggttgcacagattatgaagcgagaaatggaaagtgttgtgaaa
ttgtatgttaagctcagagtaaaagtcaaagtgggaccaagctggggtaaacttcaagac
ctggacatttaa

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