KEGG   Carassius auratus (goldfish): 113061846
Entry
113061846         CDS       T07313                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03020  RNA polymerase
caua03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113061846
  09124 Replication and repair
   03420 Nucleotide excision repair
    113061846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:caua03021]
    113061846
   03400 DNA repair and recombination proteins [BR:caua03400]
    113061846
Transcription machinery [BR:caua03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     113061846
DNA repair and recombination proteins [BR:caua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113061846
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Ogr_Delta Zn_ribbon_recom TF_Zn_Ribbon DZR Zn_Tnp_IS1595 Lar_restr_allev zf-C4_Topoisom GpA_ATPase
Other DBs
NCBI-GeneID: 113061846
NCBI-ProteinID: XP_026087096
Ensembl: ENSCARG00000068427
UniProt: A0A6P6LUI0
LinkDB
Position
43:19702226..19704863
AA seq 126 aa
MDLEGGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKIT
HEVDELTQIIADVAQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHC
GHRWTE
NT seq 381 nt   +upstreamnt  +downstreamnt
atggatctggaagggggcacttacgaacctggttttgtgggcatcaggttctgtcaggag
tgtaataacatgctgtatcctaaagaggataaagaaaaccgcatcctgctctacgcttgc
agaaactgtgactatcaacaagaagccgataacagctgcatctatgtgaacaaaatcacc
catgaggttgatgaactcactcagattattgcagacgtggctcaggatccaacactacct
cggacggaggaccacccttgcccaaagtgtggccacaaggaggcggtgttcttccagtct
cacagcatgaaggctgaggatgccatgaggctttactatgtctgcactgccccacactgc
ggccacagatggacagaatga

DBGET integrated database retrieval system